RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 H0Y980 276 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 M0QZ92 97 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 KPNA3O00505 521 aaPredicted RBP1.22□□□□□ -2.21
VPS50-213ENST00000477572 FFAR1O14842 300 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 AZIN1O14977 448 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 TGOLN2O43493 480 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 PSCAO43653 123 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 APOC1P02654 83 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 CALB1P05937 261 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 BGNP21810 368 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 S100A2P29034 98 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 LGALS7P47929 136 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 CDK9P50750 372 aaKnown RBP1.22□□□□□ -2.21
VPS50-213ENST00000477572 CRYBA4P53673 196 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 CLDN12P56749 244 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 MAGOHP61326 146 aaKnown RBP1.22□□□□□ -2.21
VPS50-213ENST00000477572 AP1S1P61966 158 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 RANP62826 216 aaKnown RBP1.22□□□□□ -2.21
VPS50-213ENST00000477572 CCL7P80098 99 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 C2orf80Q0P641 193 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 MED21Q13503 144 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 TOMM34Q15785 309 aaPredicted RBP1.22□□□□□ -2.21
VPS50-213ENST00000477572 ZNF181Q2M3W8 571 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 BSXQ3C1V8 233 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 SLC36A2Q495M3 483 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 CLLU1OSQ5K130 101 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 TIMM23BQ5SRD1 257 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 IDNKQ5T6J7 187 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 SYPL2Q5VXT5 272 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 IDO2Q6ZQW0 420 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 AHSA2Q719I0 299 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 DHFR2Q86XF0 187 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 LYPD6Q86Y78 171 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 Q8N402 240 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 RIBC1Q8N443 379 aaPredicted RBP1.22□□□□□ -2.21
VPS50-213ENST00000477572 C12orf29Q8N999 325 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 TMEM35BQ8NCS4 154 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 PXT1Q8NFP0 134 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 OR8A1Q8NGG7 326 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 OR2D3Q8NGH3 330 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 OR11L1Q8NGX0 322 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 LHFPL5Q8TAF8 219 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 PIGXQ8TBF5 258 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 RASSF5Q8WWW0 418 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 NELFBQ8WX92 580 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 PTH2Q96A98 100 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 PPWD1Q96BP3 646 aaKnown RBP1.22□□□□□ -2.21
VPS50-213ENST00000477572 ANKRD36BP1Q96IX9 119 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 QKIQ96PU8 341 aaKnown RBP eCLIP1.22□□□□□ -2.21
VPS50-213ENST00000477572 EBNA1BP2Q99848 306 aaKnown RBP1.22□□□□□ -2.21
VPS50-213ENST00000477572 NIPSNAP1Q9BPW8 284 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 TIPINQ9BVW5 301 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 HIGD2AQ9BW72 106 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 ZNF436Q9C0F3 470 aaPredicted RBP1.22□□□□□ -2.21
VPS50-213ENST00000477572 ALX4Q9H161 411 aaPredicted RBP1.22□□□□□ -2.21
VPS50-213ENST00000477572 RHOFQ9HBH0 211 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 RMND1Q9NWS8 449 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 C1orf109Q9NX04 203 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 BABAM2Q9NXR7 383 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 SMPXQ9UHP9 88 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 GUCA1BQ9UMX6 200 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 ZNF337Q9Y3M9 751 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 ASB4Q9Y574 426 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 V9GYY9 64 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 SHANK3Q9BYB0 1731 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 ERBINQ96RT1 1412 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 ARHGAP32A7KAX9 2087 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 WDR97A6NE52 1622 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 ARHGEF10O15013 1369 aa1.21□□□□□ -2.21
VPS50-213ENST00000477572 KIAA0232Q92628 1395 aa1.21□□□□□ -2.21
VPS50-213ENST00000477572 IGHV3-21A0A0B4J1V1 117 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 A0A1B0GV72 72 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 ANKRD20A5PA0PJZ0 165 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 A6NED7 52 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 TVP23AA6NH52 213 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 RFPL4AA6NLU0 287 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 DISC1C4P0D8 188 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 C9J4A7 227 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 F5H5P2 479 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 F5H768 121 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 RFPL4AL1F8VTS6 287 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 H3BMM0 161 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 J3QLI3 93 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 M0R1B8 84 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 PSMD12O00232 456 aaPredicted RBP1.21□□□□□ -2.22
VPS50-213ENST00000477572 SULT1C2O00338 296 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 CXCR6O00574 342 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 ACOX3O15254 700 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 TCAPO15273 167 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 SHOX2O60902 331 aaPredicted RBP1.21□□□□□ -2.22
VPS50-213ENST00000477572 PFDN1O60925 122 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 CNIH1O95406 144 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 CDS2O95674 445 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 NBEAP1P0C6P0 100 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 LINC00614P0C842 121 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 OCM2P0CE71 109 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 KCNE1P15382 129 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 NQO1P15559 274 aaKnown RBP1.21□□□□□ -2.22
VPS50-213ENST00000477572 MAGEA3P43357 314 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 FAM3AP98173 230 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms