RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 CLEC18CQ8NCF0 446 aa11.92□□□□□ -0.5
COL4A6-206ENST00000477085 OR2T35Q8NGX2 323 aa11.92□□□□□ -0.5
COL4A6-206ENST00000477085 LHFPL5Q8TAF8 219 aa11.92□□□□□ -0.5
COL4A6-206ENST00000477085 MSI2Q96DH6 328 aaKnown RBP11.92□□□□□ -0.5
COL4A6-206ENST00000477085 PAIP2BQ9ULR5 123 aaKnown RBP11.92□□□□□ -0.5
COL4A6-206ENST00000477085 TACC2O95359 2948 aa11.92□□□□□ -0.5
COL4A6-206ENST00000477085 C3orf85A0A1B0GTC6 90 aa11.92□□□□□ -0.5
COL4A6-206ENST00000477085 GOSR1O95249 250 aa11.92□□□□□ -0.5
COL4A6-206ENST00000477085 RPL31P62899 125 aaKnown RBP11.92□□□□□ -0.5
COL4A6-206ENST00000477085 SRSF4Q08170 494 aaKnown RBP11.92□□□□□ -0.5
COL4A6-206ENST00000477085 LRRC10Q5BKY1 277 aa11.92□□□□□ -0.5
COL4A6-206ENST00000477085 SP5Q6BEB4 398 aaPredicted RBP11.92□□□□□ -0.5
COL4A6-206ENST00000477085 C11orf88Q6PI97 169 aa11.92□□□□□ -0.5
COL4A6-206ENST00000477085 COQ8AQ8NI60 647 aa11.92□□□□□ -0.5
COL4A6-206ENST00000477085 LEAP2Q969E1 77 aa11.92□□□□□ -0.5
COL4A6-206ENST00000477085 DSCAML1Q8TD84 2053 aa11.91□□□□□ -0.5
COL4A6-206ENST00000477085 CRYBG3Q68DQ2 2970 aa11.91□□□□□ -0.5
COL4A6-206ENST00000477085 PHF1O43189 567 aaPredicted RBP11.91□□□□□ -0.5
COL4A6-206ENST00000477085 PPIHO43447 177 aaKnown RBP11.91□□□□□ -0.5
COL4A6-206ENST00000477085 CCL3L1P16619 93 aa11.91□□□□□ -0.5
COL4A6-206ENST00000477085 MEF2CQ06413 473 aaPredicted RBP11.91□□□□□ -0.5
COL4A6-206ENST00000477085 EIF4EBP1Q13541 118 aaPredicted RBP11.91□□□□□ -0.5
COL4A6-206ENST00000477085 FAM185AQ8N0U4 392 aa11.91□□□□□ -0.5
COL4A6-206ENST00000477085 DRAM1Q8N682 238 aa11.91□□□□□ -0.5
COL4A6-206ENST00000477085 CCDC71LQ8N9Z2 235 aa11.91□□□□□ -0.5
COL4A6-206ENST00000477085 CHODLQ9H9P2 273 aa11.91□□□□□ -0.5
COL4A6-206ENST00000477085 JPT1Q9UK76 154 aa11.91□□□□□ -0.5
COL4A6-206ENST00000477085 KCNIP3Q9Y2W7 256 aa11.91□□□□□ -0.5
COL4A6-206ENST00000477085 LINC00312Q9Y6C7 94 aa11.91□□□□□ -0.5
COL4A6-206ENST00000477085 TENM4Q6N022 2769 aa11.91□□□□□ -0.5
COL4A6-206ENST00000477085 hADV38S2A0JD32 116 aa11.9□□□□□ -0.5
COL4A6-206ENST00000477085 ZNF729A6NN14 1252 aaPredicted RBP11.9□□□□□ -0.5
COL4A6-206ENST00000477085 SLC31A2O15432 143 aa11.9□□□□□ -0.5
COL4A6-206ENST00000477085 ST8SIA5O15466 376 aa11.9□□□□□ -0.5
COL4A6-206ENST00000477085 YPEL1O60688 119 aa11.9□□□□□ -0.5
COL4A6-206ENST00000477085 PROP1O75360 226 aa11.9□□□□□ -0.5
COL4A6-206ENST00000477085 HOXB5P09067 269 aa11.9□□□□□ -0.5
COL4A6-206ENST00000477085 RAP2BP61225 183 aa11.9□□□□□ -0.5
COL4A6-206ENST00000477085 LAMTOR1Q6IAA8 161 aa11.9□□□□□ -0.5
COL4A6-206ENST00000477085 LIAT1Q6ZQX7 453 aa11.9□□□□□ -0.5
COL4A6-206ENST00000477085 H1FXQ92522 213 aaKnown RBP11.9□□□□□ -0.5
COL4A6-206ENST00000477085 NINJ1Q92982 152 aa11.9□□□□□ -0.5
COL4A6-206ENST00000477085 ABHD14BQ96IU4 210 aa11.9□□□□□ -0.5
COL4A6-206ENST00000477085 C18orf12Q96KH6 178 aa11.9□□□□□ -0.5
COL4A6-206ENST00000477085 OR10C1Q96KK4 312 aa11.9□□□□□ -0.5
COL4A6-206ENST00000477085 YPEL2Q96QA6 119 aa11.9□□□□□ -0.5
COL4A6-206ENST00000477085 OR2D2Q9H210 308 aa11.9□□□□□ -0.5
COL4A6-206ENST00000477085 RAB18Q9NP72 206 aa11.9□□□□□ -0.5
COL4A6-206ENST00000477085 GNG12Q9UBI6 72 aa11.9□□□□□ -0.5
COL4A6-206ENST00000477085 UBE2J1Q9Y385 318 aaPredicted RBP11.9□□□□□ -0.5
COL4A6-206ENST00000477085 BOLA1Q9Y3E2 137 aa11.9□□□□□ -0.5
COL4A6-206ENST00000477085 RBM7Q9Y580 266 aaKnown RBP11.9□□□□□ -0.5
COL4A6-206ENST00000477085 C13orf42A0A1B0GVH6 325 aa11.9□□□□□ -0.51
COL4A6-206ENST00000477085 FAM25EA8MYX2 175 aa11.9□□□□□ -0.51
COL4A6-206ENST00000477085 WNT2P09544 360 aa11.9□□□□□ -0.51
COL4A6-206ENST00000477085 EFNA4P52798 201 aa11.9□□□□□ -0.51
COL4A6-206ENST00000477085 DLX6P56179 175 aa11.9□□□□□ -0.51
COL4A6-206ENST00000477085 LINC00205P59089 165 aa11.9□□□□□ -0.51
COL4A6-206ENST00000477085 PRAMEF5Q5TYX0 476 aa11.9□□□□□ -0.51
COL4A6-206ENST00000477085 C1orf229Q6ZS94 237 aaPredicted RBP11.9□□□□□ -0.51
COL4A6-206ENST00000477085 LYZL2Q7Z4W2 148 aa11.9□□□□□ -0.51
COL4A6-206ENST00000477085 CMTM1Q8IZ96 169 aa11.9□□□□□ -0.51
COL4A6-206ENST00000477085 ZNF645Q8N7E2 425 aa11.9□□□□□ -0.51
COL4A6-206ENST00000477085 LRTM2Q8N967 370 aa11.9□□□□□ -0.51
COL4A6-206ENST00000477085 GRPEL2Q8TAA5 225 aa11.9□□□□□ -0.51
COL4A6-206ENST00000477085 AKR1E2Q96JD6 320 aa11.9□□□□□ -0.51
COL4A6-206ENST00000477085 SUCNR1Q9BXA5 334 aa11.9□□□□□ -0.51
COL4A6-206ENST00000477085 TMEM222Q9H0R3 208 aa11.9□□□□□ -0.51
COL4A6-206ENST00000477085 GFOD1Q9NXC2 390 aa11.9□□□□□ -0.51
COL4A6-206ENST00000477085 IDI2-AS1Q9NZ38 188 aa11.9□□□□□ -0.51
COL4A6-206ENST00000477085 KCNS2Q9ULS6 477 aa11.9□□□□□ -0.51
COL4A6-206ENST00000477085 PSG11Q9UQ72 335 aa11.9□□□□□ -0.51
COL4A6-206ENST00000477085 FBN2P35556 2912 aa11.89□□□□□ -0.51
COL4A6-206ENST00000477085 LRRK2Q5S007 2527 aa11.89□□□□□ -0.51
COL4A6-206ENST00000477085 TRAV14DV4A0A0A6YYC5 116 aa11.89□□□□□ -0.51
COL4A6-206ENST00000477085 DNASE1P24855 282 aa11.89□□□□□ -0.51
COL4A6-206ENST00000477085 F2RP25116 425 aa11.89□□□□□ -0.51
COL4A6-206ENST00000477085 TMEM33P57088 247 aa11.89□□□□□ -0.51
COL4A6-206ENST00000477085 IFITM2Q01629 132 aa11.89□□□□□ -0.51
COL4A6-206ENST00000477085 CT45A1Q5HYN5 189 aa11.89□□□□□ -0.51
COL4A6-206ENST00000477085 ZNF295-AS1Q8N0V1 137 aa11.89□□□□□ -0.51
COL4A6-206ENST00000477085 C11orf42Q8N5U0 333 aa11.89□□□□□ -0.51
COL4A6-206ENST00000477085 CT45A3Q8NHU0 189 aa11.89□□□□□ -0.51
COL4A6-206ENST00000477085 PLSCR3Q9NRY6 295 aa11.89□□□□□ -0.51
COL4A6-206ENST00000477085 TAS2R3Q9NYW6 316 aa11.89□□□□□ -0.51
COL4A6-206ENST00000477085 USF3Q68DE3 2245 aa11.89□□□□□ -0.51
COL4A6-206ENST00000477085 ASH1LQ9NR48 2969 aaKnown RBP11.89□□□□□ -0.51
COL4A6-206ENST00000477085 VPS13CQ709C8 3753 aa11.89□□□□□ -0.51
COL4A6-206ENST00000477085 A0A1W2PPE3 182 aa11.88□□□□□ -0.51
COL4A6-206ENST00000477085 PLA2G2AP14555 144 aa11.88□□□□□ -0.51
COL4A6-206ENST00000477085 BRWD1-AS2P59051 145 aa11.88□□□□□ -0.51
COL4A6-206ENST00000477085 RPL30P62888 115 aaKnown RBP11.88□□□□□ -0.51
COL4A6-206ENST00000477085 TMEM155Q4W5P6 130 aa11.88□□□□□ -0.51
COL4A6-206ENST00000477085 ZNF439Q8NDP4 499 aa11.88□□□□□ -0.51
COL4A6-206ENST00000477085 OR51H1Q8NH63 302 aa11.88□□□□□ -0.51
COL4A6-206ENST00000477085 RAB1CQ92928 201 aa11.88□□□□□ -0.51
COL4A6-206ENST00000477085 TMEM56Q96MV1 263 aa11.88□□□□□ -0.51
COL4A6-206ENST00000477085 IFI27L2Q9H2X8 130 aa11.88□□□□□ -0.51
COL4A6-206ENST00000477085 RANBP3Q9H6Z4 567 aaPredicted RBP11.88□□□□□ -0.51
COL4A6-206ENST00000477085 METTL8Q9H825 291 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms