RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 PIGTQ969N2 578 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 GUCD1Q96NT3 240 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 SDF2L1Q9HCN8 221 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 RNF150Q9ULK6 438 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 ST8SIA3O43173 380 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 ZIC3O60481 467 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 CTSDP07339 412 aaPredicted RBP7.17□□□□□ -1.26
VAPB-205ENST00000476395 PFN1P07737 140 aaKnown RBP7.17□□□□□ -1.26
VAPB-205ENST00000476395 BMP5P22003 454 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 ZNF726P1Q15940 193 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 SLC25A26Q70HW3 274 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 PLXDC1Q8IUK5 500 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 LGI3Q8N145 548 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 TSTD1Q8NFU3 115 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 CADM4Q8NFZ8 388 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 RPUSD4Q96CM3 377 aaKnown RBP7.17□□□□□ -1.26
VAPB-205ENST00000476395 ALKBH3Q96Q83 286 aaPredicted RBP7.17□□□□□ -1.26
VAPB-205ENST00000476395 SRD5A3Q9H8P0 318 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 CFAP47Q6ZTR5 3102 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 LRRC3CA6NJW4 275 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 NDUFB8O95169 186 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 SFTPDP35247 375 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 TCF23Q7RTU1 214 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 TMPRSS7Q7RTY8 843 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 PLPPR1Q8TBJ4 325 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 GATAD1Q8WUU5 269 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 CACNG8Q8WXS5 425 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 FGF23Q9GZV9 251 aaPredicted RBP7.17□□□□□ -1.26
VAPB-205ENST00000476395 VCX2Q9H322 139 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 KLRF1Q9NZS2 232 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 CRIM1Q9NZV1 1036 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 ANXA10Q9UJ72 324 aa7.17□□□□□ -1.26
VAPB-205ENST00000476395 FAM230AA0A1W2PPH8 454 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 CEBPZOSA8MTT3 80 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 M0QZ24 198 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 DUX1O43812 170 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 ANGPTL7O43827 346 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 LILRA1O75019 489 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 DEFA4P12838 97 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 ARL3P36405 182 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 RAB7AP51149 207 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 MRPL14Q6P1L8 145 aaKnown RBP7.16□□□□□ -1.26
VAPB-205ENST00000476395 GBGT1Q8N5D6 347 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 ZNF283Q8N7M2 679 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 STPG4Q8N801 248 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 LRTM2Q8N967 370 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 OR2AE1Q8NHA4 323 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 FGFBP3Q8TAT2 258 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 TMEM18Q96B42 140 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 SCGB3A2Q96PL1 93 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 SRXN1Q9BYN0 137 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 RBKSQ9H477 322 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 SLC2A9Q9NRM0 540 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 DIDO1Q9BTC0 2240 aaKnown RBP7.16□□□□□ -1.26
VAPB-205ENST00000476395 LOC102724200A0A096LPH7 203 aaPredicted RBP7.16□□□□□ -1.26
VAPB-205ENST00000476395 ZNF850A8MQ14 1090 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 SPRY1O43609 319 aaPredicted RBP7.16□□□□□ -1.26
VAPB-205ENST00000476395 FCGR2AP12318 317 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 EPHA8P29322 1005 aaPredicted RBP7.16□□□□□ -1.26
VAPB-205ENST00000476395 APOBEC3AP31941 199 aaPredicted RBP7.16□□□□□ -1.26
VAPB-205ENST00000476395 TAS2R46P59540 309 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 GRB2P62993 217 aaKnown RBP7.16□□□□□ -1.26
VAPB-205ENST00000476395 TMEM42Q69YG0 159 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 KMT5CQ86Y97 462 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 ZNF295-AS1Q8N0V1 137 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 TMEM252Q8N6L7 170 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 NAA60Q9H7X0 242 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 ZNF160Q9HCG1 818 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 RPRMQ9NS64 109 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 WNT16Q9UBV4 365 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 VAX2Q9UIW0 290 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 PIGLQ9Y2B2 252 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 GPR179Q6PRD1 2367 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 PPP5D1E7EU14 171 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 SYNGR3O43761 229 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 CRYGCP07315 174 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 CHRNB4P30926 498 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 GALR1P47211 349 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 ZNF41P51814 821 aaPredicted RBP7.16□□□□□ -1.26
VAPB-205ENST00000476395 PCOLCEQ15113 449 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 RNFT1Q5M7Z0 435 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 GPR157Q5UAW9 335 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 OR51G1Q8NGK1 321 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 OR4D5Q8NGN0 318 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 HS3ST6Q96QI5 342 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 RBM24Q9BX46 236 aaKnown RBP7.16□□□□□ -1.26
VAPB-205ENST00000476395 CSTL1Q9H114 145 aa7.16□□□□□ -1.26
VAPB-205ENST00000476395 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 FBLL1A6NHQ2 334 aaKnown RBP7.15□□□□□ -1.26
VAPB-205ENST00000476395 F2Z2F3 143 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 EGR1P18146 543 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 B3GALT5-AS1P59052 145 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 TLE4Q04727 773 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 TMEM267Q0VDI3 215 aaPredicted RBP7.15□□□□□ -1.26
VAPB-205ENST00000476395 PIGYQ3MUY2 71 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 ABCA11PQ4W5N1 156 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 LEMD1Q68G75 181 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 Q6ZWC4 215 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 FAM169BQ8N8A8 192 aa7.15□□□□□ -1.26
VAPB-205ENST00000476395 MS4A10Q96PG2 267 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms