RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 C1orf232A0A0U1RR37 186 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 LOC285095A0A1B0GVY8 99 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 GOLGA6L19H0YKK7 550 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 KCNK1O00180 336 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 MFSD11O43934 449 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 POP7O75817 140 aaKnown RBP2.35□□□□□ -2.03
PTCD3-211ENST00000476215 CDK14O94921 469 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 KLHL2O95198 593 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 NRASP01111 189 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 HRASP01112 189 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 KRASP01116 189 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 IGKV1D-16P01601 117 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 IGLV6-57P01721 117 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 IGHV1-46P01743 117 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 HLA-DQB2P05538 268 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 TPM3P06753 285 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 PIRTP0C851 137 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 ZNF7P17097 686 aaPredicted RBP2.35□□□□□ -2.03
PTCD3-211ENST00000476215 CFHR2P36980 270 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 PEX19P40855 299 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 UBE2IP63279 158 aaKnown RBP2.35□□□□□ -2.03
PTCD3-211ENST00000476215 DOC2AQ14183 400 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 HENMT1Q5T8I9 393 aaKnown RBP2.35□□□□□ -2.03
PTCD3-211ENST00000476215 PDPK2PQ6A1A2 396 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 ADM2Q7Z4H4 148 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 LRRC8AQ8IWT6 810 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 ZNF664Q8N3J9 261 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 CCDC112Q8NEF3 446 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 OR2M7Q8NG81 312 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 SLC37A2Q8TED4 501 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 CCDC42Q96M95 316 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 OLFM3Q96PB7 478 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 OR2M4Q96R27 311 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 DDA1Q9BW61 102 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 NCOR1P1Q9H4R4 102 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 ZNHIT6Q9NWK9 470 aaKnown RBP2.35□□□□□ -2.03
PTCD3-211ENST00000476215 STX18Q9P2W9 335 aaKnown RBP2.35□□□□□ -2.03
PTCD3-211ENST00000476215 KLF12Q9Y4X4 402 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 SLC22A7Q9Y694 548 aa2.35□□□□□ -2.03
PTCD3-211ENST00000476215 KIR2DS1A0A191URI9 304 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 A0A1W2PRF3 423 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 A0A1W2PRM7 423 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 J3QT63 122 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 ZNF701M0R085 212 aaPredicted RBP2.34□□□□□ -2.03
PTCD3-211ENST00000476215 TOX3O15405 576 aaPredicted RBP2.34□□□□□ -2.03
PTCD3-211ENST00000476215 SPOPO43791 374 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 CST8O60676 142 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 TPM1P09493 284 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 F8A1P23610 371 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 CA5AP35218 305 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 RGS6P49758 472 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 HADHBP55084 474 aaKnown RBP2.34□□□□□ -2.03
PTCD3-211ENST00000476215 DYNLT1P63172 113 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 MEF2BQ02080 365 aaPredicted RBP2.34□□□□□ -2.03
PTCD3-211ENST00000476215 ATP5G2Q06055 141 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 ST3GAL4Q11206 333 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 BIKQ13323 160 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 XRCC4Q13426 336 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 DEFB109BQ30KR1 87 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 SLC35D2Q76EJ3 337 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 PID1Q7Z2X4 250 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 ZNF567Q8N184 647 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 OR6K6Q8NGW6 343 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 KIAA1143Q96AT1 154 aaPredicted RBP2.34□□□□□ -2.03
PTCD3-211ENST00000476215 ZNF514Q96K75 400 aaPredicted RBP2.34□□□□□ -2.03
PTCD3-211ENST00000476215 CATSPER2Q96P56 530 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 DERL3Q96Q80 235 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 TM2D3Q9BRN9 247 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 TRABDQ9H4I3 376 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 SND1-IT1Q9HBX3 110 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 RPRD1BQ9NQG5 326 aaKnown RBP2.34□□□□□ -2.03
PTCD3-211ENST00000476215 CSMD1Q96PZ7 3565 aa2.34□□□□□ -2.03
PTCD3-211ENST00000476215 NYNRINQ9P2P1 1898 aaKnown RBP2.34□□□□□ -2.03
PTCD3-211ENST00000476215 SPTBN1Q01082 2364 aaKnown RBP2.34□□□□□ -2.04
PTCD3-211ENST00000476215 hCG_1818297A0A087WSY0 165 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 IGHV2OR16-5A0A0B4J2B6 119 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 LOC100653049A0A140TA62 436 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 MGAT4DA6NG13 374 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 KRT34O76011 436 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 INAFM2P0DMQ5 153 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 ZNF35P13682 527 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 HLA-GP17693 338 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 MSR1P21757 451 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 PSMB2P49721 201 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 HCCSP53701 268 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 XIAPP98170 497 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 SPA17Q15506 151 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 CPTPQ5TA50 214 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 FAM104BQ5XKR9 115 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 ZFAND6Q6FIF0 208 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 FAM151BQ6UXP7 276 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 VTCN1Q7Z7D3 282 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 TRAPPC5Q8IUR0 188 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 FBXO36Q8NEA4 188 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 OR4K2Q8NGD2 314 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 TFGQ92734 400 aaPredicted RBP2.33□□□□□ -2.04
PTCD3-211ENST00000476215 VAT1Q99536 393 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 ULBP3Q9BZM4 244 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 TRIM4Q9C037 500 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 GOLPH3Q9H4A6 298 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms