RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 KITLGP21583 273 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 ANOS1P23352 680 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 IL2RGP31785 369 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 ZNF93P35789 620 aaPredicted RBP3.52□□□□□ -1.85
VPS13D-206ENST00000476045 HTR5AP47898 357 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 CX3CR1P49238 355 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 NPY4RP50391 375 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 CAPZA1P52907 286 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 ZNF121P58317 390 aaPredicted RBP3.52□□□□□ -1.85
VPS13D-206ENST00000476045 LMO4P61968 165 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 PPP1CBP62140 327 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 LSM6P62312 80 aaKnown RBP3.52□□□□□ -1.85
VPS13D-206ENST00000476045 CCL8P80075 99 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 QRFPP83859 136 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 FGL1Q08830 312 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 RIPPLY1Q0D2K3 151 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 ARFRP1Q13795 201 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 ZNF273Q14593 569 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 CLVS2Q5SYC1 327 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 RAB12Q6IQ22 244 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 C11orf87Q6NUJ2 197 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 SLC25A47Q6Q0C1 308 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 DEGS2Q6QHC5 323 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 RBMS3Q6XE24 437 aaKnown RBP3.52□□□□□ -1.85
VPS13D-206ENST00000476045 IL17RELQ6ZVW7 336 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 LYPD6Q86Y78 171 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 FAM219AQ8IW50 185 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 C1orf87Q8N0U7 546 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 OR5AS1Q8N127 324 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 NKAIN3Q8N8D7 197 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 ZDHHC22Q8N966 263 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 TMEM185AQ8NFB2 350 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 OR8B12Q8NGG6 310 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 OR5L1Q8NGL2 311 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 OR5D14Q8NGL3 314 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 OR1J1Q8NGS3 322 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 OR10K1Q8NGX5 313 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 OR4K15Q8NH41 348 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 SGMS2Q8NHU3 365 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 THAP6Q8TBB0 222 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 NANPQ8TBE9 248 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 KLF14Q8TD94 323 aaPredicted RBP3.52□□□□□ -1.85
VPS13D-206ENST00000476045 FAM216AQ8WUB2 273 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 MAFIPQ8WZ33 124 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 DCUN1D4Q92564 292 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 MRGPRFQ96AM1 343 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 NARS2Q96I59 477 aaKnown RBP3.52□□□□□ -1.85
VPS13D-206ENST00000476045 GPER1Q99527 375 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 PHB2Q99623 299 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 PRRT1Q99946 306 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 ST6GALNAC5Q9BVH7 336 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 LPAR5Q9H1C0 372 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 SLC25A32Q9H2D1 315 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 OPA3Q9H6K4 179 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 FN3KRPQ9HA64 309 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 ELL3Q9HB65 397 aaPredicted RBP3.52□□□□□ -1.85
VPS13D-206ENST00000476045 GPR84Q9NQS5 396 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 TAS2R3Q9NYW6 316 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 ZNF319Q9P2F9 582 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 MBD2Q9UBB5 411 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 DUX4Q9UBX2 424 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 TNFSF18Q9UNG2 199 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 KCNK7Q9Y2U2 307 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 WIPI2Q9Y4P8 454 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 TIMM10BQ9Y5J6 103 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 LHFPL6Q9Y693 200 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 TRRAPQ9Y4A5 3859 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 TRGV11A0A075B6L2 103 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 A0A0B4J2A0 478 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 RNF222A6NCQ9 220 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 FAM74A7A6NL05 159 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 LRRC30A6NM36 301 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 TMEM14DPA8MWL7 114 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 ZNF878C9JN71 531 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 CLDN34H7C241 214 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 DNASE2O00115 360 aaPredicted RBP3.51□□□□□ -1.85
VPS13D-206ENST00000476045 SDCBPO00560 298 aaPredicted RBP3.51□□□□□ -1.85
VPS13D-206ENST00000476045 RER1O15258 196 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 ADAP1O75689 374 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 OR2F2O95006 317 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 SFT2D2O95562 160 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 IGHV2-70P01814 119 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 PGAM2P15259 253 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 HIST1H1DP16402 221 aaKnown RBP3.51□□□□□ -1.85
VPS13D-206ENST00000476045 SELEP16581 610 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 CCNOP22674 350 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 MPZP25189 248 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 MDH2P40926 338 aaKnown RBP3.51□□□□□ -1.85
VPS13D-206ENST00000476045 PROK1P58294 105 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 TAS2R31P59538 309 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 RPL15P61313 204 aaKnown RBP3.51□□□□□ -1.85
VPS13D-206ENST00000476045 TNFAIP6P98066 277 aaPredicted RBP3.51□□□□□ -1.85
VPS13D-206ENST00000476045 PSG4Q00888 419 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 SRSF4Q08170 494 aaKnown RBP3.51□□□□□ -1.85
VPS13D-206ENST00000476045 MZT1Q08AG7 82 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 ECH1Q13011 328 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 OR2F1Q13607 317 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 PCK2Q16822 640 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 MICBQ29980 383 aa3.51□□□□□ -1.85
VPS13D-206ENST00000476045 FAM74A3Q4VXF1 159 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms