RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ZNF737O75373 536 aa12.79□□□□□ -0.36
CPSF3-203ENST00000475482 PEX14O75381 377 aa12.79□□□□□ -0.36
CPSF3-203ENST00000475482 TK1P04183 234 aa12.79□□□□□ -0.36
CPSF3-203ENST00000475482 OR5H8P0DN80 308 aa12.79□□□□□ -0.36
CPSF3-203ENST00000475482 HLA-DRB3P79483 266 aa12.79□□□□□ -0.36
CPSF3-203ENST00000475482 FOXL1Q12952 345 aa12.79□□□□□ -0.36
CPSF3-203ENST00000475482 DEFB112Q30KQ8 113 aa12.79□□□□□ -0.36
CPSF3-203ENST00000475482 METTL11BQ5VVY1 283 aa12.79□□□□□ -0.36
CPSF3-203ENST00000475482 PLPPR1Q8TBJ4 325 aa12.79□□□□□ -0.36
CPSF3-203ENST00000475482 CCDC107Q8WV48 283 aa12.79□□□□□ -0.36
CPSF3-203ENST00000475482 GAFA1Q96PS6 74 aa12.79□□□□□ -0.36
CPSF3-203ENST00000475482 DCTN5Q9BTE1 182 aa12.79□□□□□ -0.36
CPSF3-203ENST00000475482 MBNL3Q9NUK0 354 aaKnown RBP12.79□□□□□ -0.36
CPSF3-203ENST00000475482 TRAV6A0A075B6T7 132 aa12.78□□□□□ -0.36
CPSF3-203ENST00000475482 MEIKINA0A087WXM9 373 aa12.78□□□□□ -0.36
CPSF3-203ENST00000475482 SIGLEC5O15389 551 aa12.78□□□□□ -0.36
CPSF3-203ENST00000475482 ERP29P30040 261 aaKnown RBP12.78□□□□□ -0.36
CPSF3-203ENST00000475482 ARF6P62330 175 aa12.78□□□□□ -0.36
CPSF3-203ENST00000475482 SURF2Q15527 256 aaPredicted RBP12.78□□□□□ -0.36
CPSF3-203ENST00000475482 RUSC1-AS1Q66K80 236 aa12.78□□□□□ -0.36
CPSF3-203ENST00000475482 Q6YL49 198 aa12.78□□□□□ -0.36
CPSF3-203ENST00000475482 C3orf56Q8N813 242 aa12.78□□□□□ -0.36
CPSF3-203ENST00000475482 ZNF565Q8N9K5 539 aa12.78□□□□□ -0.36
CPSF3-203ENST00000475482 TMEM185AQ8NFB2 350 aa12.78□□□□□ -0.36
CPSF3-203ENST00000475482 GPN1Q9HCN4 374 aaPredicted RBP12.78□□□□□ -0.36
CPSF3-203ENST00000475482 ING3Q9NXR8 418 aa12.78□□□□□ -0.36
CPSF3-203ENST00000475482 MGAM2Q2M2H8 2515 aa12.78□□□□□ -0.36
CPSF3-203ENST00000475482 IGHV1-69DA0A0B4J2H0 117 aa12.77□□□□□ -0.37
CPSF3-203ENST00000475482 ARPC1BO15143 372 aaKnown RBP12.77□□□□□ -0.37
CPSF3-203ENST00000475482 NDUFB3O43676 98 aa12.77□□□□□ -0.37
CPSF3-203ENST00000475482 IGHV1-69P01742 117 aa12.77□□□□□ -0.37
CPSF3-203ENST00000475482 RLN1P04808 185 aa12.77□□□□□ -0.37
CPSF3-203ENST00000475482 GSTT2P0CG29 244 aa12.77□□□□□ -0.37
CPSF3-203ENST00000475482 SELLP14151 372 aa12.77□□□□□ -0.37
CPSF3-203ENST00000475482 GZMHP20718 246 aa12.77□□□□□ -0.37
CPSF3-203ENST00000475482 AESQ08117 197 aa12.77□□□□□ -0.37
CPSF3-203ENST00000475482 TATDN3Q17R31 274 aa12.77□□□□□ -0.37
CPSF3-203ENST00000475482 LRRC10Q5BKY1 277 aa12.77□□□□□ -0.37
CPSF3-203ENST00000475482 DHRS11Q6UWP2 260 aa12.77□□□□□ -0.37
CPSF3-203ENST00000475482 TMEM86BQ8N661 226 aa12.77□□□□□ -0.37
CPSF3-203ENST00000475482 KIR3DL3Q8N743 410 aa12.77□□□□□ -0.37
CPSF3-203ENST00000475482 GIMAP1Q8WWP7 306 aa12.77□□□□□ -0.37
CPSF3-203ENST00000475482 ZNF747Q9BV97 191 aa12.77□□□□□ -0.37
CPSF3-203ENST00000475482 OR6C3Q9NZP0 311 aa12.77□□□□□ -0.37
CPSF3-203ENST00000475482 KIF25Q9UIL4 384 aa12.77□□□□□ -0.37
CPSF3-203ENST00000475482 MAB21L2Q9Y586 359 aa12.77□□□□□ -0.37
CPSF3-203ENST00000475482 IGKV1D-8A0A087WSZ0 117 aa12.76□□□□□ -0.37
CPSF3-203ENST00000475482 SDCBPO00560 298 aaPredicted RBP12.76□□□□□ -0.37
CPSF3-203ENST00000475482 SPINT2O43291 252 aa12.76□□□□□ -0.37
CPSF3-203ENST00000475482 HOXA3O43365 443 aaPredicted RBP12.76□□□□□ -0.37
CPSF3-203ENST00000475482 BCAP31P51572 246 aa12.76□□□□□ -0.37
CPSF3-203ENST00000475482 MECP2P51608 486 aaKnown RBP12.76□□□□□ -0.37
CPSF3-203ENST00000475482 P2RX3P56373 397 aa12.76□□□□□ -0.37
CPSF3-203ENST00000475482 TAS2R31P59538 309 aa12.76□□□□□ -0.37
CPSF3-203ENST00000475482 HERV-K104P61576 105 aa12.76□□□□□ -0.37
CPSF3-203ENST00000475482 EDDM3AQ14507 147 aa12.76□□□□□ -0.37
CPSF3-203ENST00000475482 LPCAT3Q6P1A2 487 aa12.76□□□□□ -0.37
CPSF3-203ENST00000475482 C1orf122Q6ZSJ8 110 aa12.76□□□□□ -0.37
CPSF3-203ENST00000475482 LHFPL1Q86WI0 220 aa12.76□□□□□ -0.37
CPSF3-203ENST00000475482 Q8N7P7 452 aa12.76□□□□□ -0.37
CPSF3-203ENST00000475482 ZNRF1Q8ND25 227 aa12.76□□□□□ -0.37
CPSF3-203ENST00000475482 OR10J5Q8NHC4 309 aa12.76□□□□□ -0.37
CPSF3-203ENST00000475482 ZFAND1Q8TCF1 268 aa12.76□□□□□ -0.37
CPSF3-203ENST00000475482 TNFRSF14Q92956 283 aa12.76□□□□□ -0.37
CPSF3-203ENST00000475482 COQ2Q96H96 371 aa12.76□□□□□ -0.37
CPSF3-203ENST00000475482 CYYR1Q96J86 154 aa12.76□□□□□ -0.37
CPSF3-203ENST00000475482 ZNF2Q9BSG1 426 aaPredicted RBP12.76□□□□□ -0.37
CPSF3-203ENST00000475482 ALX4Q9H161 411 aaPredicted RBP12.76□□□□□ -0.37
CPSF3-203ENST00000475482 UNKLQ9H9P5 680 aaKnown RBP12.76□□□□□ -0.37
CPSF3-203ENST00000475482 SLC23A1Q9UHI7 598 aa12.76□□□□□ -0.37
CPSF3-203ENST00000475482 ODAMA1E959 279 aa12.75□□□□□ -0.37
CPSF3-203ENST00000475482 PFDN1O60925 122 aa12.75□□□□□ -0.37
CPSF3-203ENST00000475482 TFF1P04155 84 aa12.75□□□□□ -0.37
CPSF3-203ENST00000475482 IL5P05113 134 aa12.75□□□□□ -0.37
CPSF3-203ENST00000475482 SCTP09683 121 aa12.75□□□□□ -0.37
CPSF3-203ENST00000475482 RCC1P18754 421 aaPredicted RBP12.75□□□□□ -0.37
CPSF3-203ENST00000475482 EDDM3BP56851 147 aa12.75□□□□□ -0.37
CPSF3-203ENST00000475482 RAB25P57735 213 aa12.75□□□□□ -0.37
CPSF3-203ENST00000475482 UBE2MP61081 183 aaKnown RBP12.75□□□□□ -0.37
CPSF3-203ENST00000475482 HMGN3Q15651 99 aa12.75□□□□□ -0.37
CPSF3-203ENST00000475482 C11orf88Q6PI97 169 aa12.75□□□□□ -0.37
CPSF3-203ENST00000475482 VMO1Q7Z5L0 202 aa12.75□□□□□ -0.37
CPSF3-203ENST00000475482 PIP4P2Q8N4L2 257 aa12.75□□□□□ -0.37
CPSF3-203ENST00000475482 OR13C8Q8NGS7 320 aa12.75□□□□□ -0.37
CPSF3-203ENST00000475482 DSCAML1Q8TD84 2053 aa12.75□□□□□ -0.37
CPSF3-203ENST00000475482 LHX4Q969G2 390 aa12.75□□□□□ -0.37
CPSF3-203ENST00000475482 GALMQ96C23 342 aa12.75□□□□□ -0.37
CPSF3-203ENST00000475482 CABLES2Q9BTV7 478 aa12.75□□□□□ -0.37
CPSF3-203ENST00000475482 TAF9BQ9HBM6 251 aa12.75□□□□□ -0.37
CPSF3-203ENST00000475482 SLC25A10Q9UBX3 287 aaPredicted RBP12.75□□□□□ -0.37
CPSF3-203ENST00000475482 POMT1Q9Y6A1 747 aa12.75□□□□□ -0.37
CPSF3-203ENST00000475482 TRGV10A0A0A0MS01 117 aa12.74□□□□□ -0.37
CPSF3-203ENST00000475482 FAM172BPA6NC97 362 aa12.74□□□□□ -0.37
CPSF3-203ENST00000475482 NPIPB11E5RHQ5 1161 aa12.74□□□□□ -0.37
CPSF3-203ENST00000475482 BET1O15155 118 aa12.74□□□□□ -0.37
CPSF3-203ENST00000475482 HSPA12AO43301 675 aa12.74□□□□□ -0.37
CPSF3-203ENST00000475482 PGAM2P15259 253 aa12.74□□□□□ -0.37
CPSF3-203ENST00000475482 FCGR2CP31995 323 aa12.74□□□□□ -0.37
CPSF3-203ENST00000475482 GLIPR1P48060 266 aa12.74□□□□□ -0.37
CPSF3-203ENST00000475482 MEF2CQ06413 473 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms