RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 FAM110DQ8TAY7 271 aaPredicted RBP9.57□□□□□ -0.88
CLIP2-204ENST00000474962 ZNF596Q8TC21 504 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 PIFOQ8TCI5 191 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 NUDCD2Q8WVJ2 157 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 KIRREL1Q96J84 757 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 SLIRPQ9GZT3 109 aaKnown RBP9.57□□□□□ -0.88
CLIP2-204ENST00000474962 MMP27Q9H306 513 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 ZNF286AQ9HBT8 521 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 Q9N2K0 584 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 IFT46Q9NQC8 304 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 OR2S2Q9NQN1 319 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 IGHV2-26A0A0B4J1V2 119 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 IGHV3-43A0A0B4J1X8 118 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 FAM172BPA6NC97 362 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 C15orf65H3BRN8 121 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 F2RL2O00254 374 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 MMP23AO75900 390 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 TSPAN15O95858 294 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 FCGR3AP08637 254 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 IGHV3-43DP0DP04 118 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 HLA-DRB3P79483 266 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 MADCAM1Q13477 382 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 ZNF880Q6PDB4 577 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 BAIAP2L2Q6UXY1 529 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 LHFPL4Q7Z7J7 247 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 SNX29P2Q8IUI4 249 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 LAX1Q8IWV1 398 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 DYNAPQ8N1N2 210 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 OR9G1Q8NH87 305 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 CREB3L1Q96BA8 519 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 CYYR1Q96J86 154 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 OCSTAMPQ9BR26 566 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 LINC00574Q9H8X3 128 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 RABL2AQ9UBK7 228 aaPredicted RBP9.56□□□□□ -0.88
CLIP2-204ENST00000474962 ZNF230Q9UIE0 474 aaPredicted RBP9.56□□□□□ -0.88
CLIP2-204ENST00000474962 ELF5Q9UKW6 265 aaPredicted RBP9.56□□□□□ -0.88
CLIP2-204ENST00000474962 RABL2BQ9UNT1 228 aa9.56□□□□□ -0.88
CLIP2-204ENST00000474962 FABP7O15540 132 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 IGHV3-7P01780 117 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 ZBTB25P24278 435 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 GDNFP39905 211 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 GNG10P50151 68 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 ARPC4P59998 168 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 HTD2P86397 168 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 IL18Q14116 193 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 HMGN3Q15651 99 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 SRSF7Q16629 238 aaKnown RBP eCLIP9.55□□□□□ -0.88
CLIP2-204ENST00000474962 LRRC75BQ2VPJ9 315 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 PLA1AQ53H76 456 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 LDLRAD2Q5SZI1 272 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 STEAP3Q658P3 488 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 CNIH2Q6PI25 160 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 OR11H6Q8NGC7 330 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 OR10V1Q8NGI7 309 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 OR4A4PQ8NGN8 299 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 OR10X1Q8NGY0 326 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 MAFIPQ8WZ33 124 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 GINS4Q9BRT9 223 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 GFOD1Q9NXC2 390 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 SLC23A1Q9UHI7 598 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 JPT1Q9UK76 154 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 TBL2Q9Y4P3 447 aaKnown RBP9.55□□□□□ -0.88
CLIP2-204ENST00000474962 AMMECR1Q9Y4X0 333 aaPredicted RBP9.55□□□□□ -0.88
CLIP2-204ENST00000474962 A3GALT2U3KPV4 340 aa9.55□□□□□ -0.88
CLIP2-204ENST00000474962 A0A087X0M5 115 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 A0A1B0GX30 115 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 A6NHS1 94 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 BET1O15155 118 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 CHST1O43916 411 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 TPPPO94811 219 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 SCTP09683 121 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 CTXN2P0C2S0 81 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 PTHLHP12272 177 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 IL3RAP26951 378 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 HTR1DP28221 377 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 CD34P28906 385 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 CEACAM3P40198 252 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 CEACAM6P40199 344 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 ARHGDIBP52566 201 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 Q3ZCU0 254 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 FOXB2Q5VYV0 432 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 ZNF626Q68DY1 528 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 C11orf44Q8N8P7 122 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 BEST4Q8NFU0 473 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 OR52L2PQ8NGH6 319 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 OR10J5Q8NHC4 309 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 LEAP2Q969E1 77 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 NXF2Q9GZY0 626 aaKnown RBP9.54□□□□□ -0.88
CLIP2-204ENST00000474962 MIXL1Q9H2W2 232 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 SCPEP1Q9HB40 452 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 PSG11Q9UQ72 335 aa9.54□□□□□ -0.88
CLIP2-204ENST00000474962 MEIS3P1A6NDR6 274 aa9.53□□□□□ -0.88
CLIP2-204ENST00000474962 FABP12A6NFH5 140 aa9.53□□□□□ -0.88
CLIP2-204ENST00000474962 LEUTXA8MZ59 168 aa9.53□□□□□ -0.88
CLIP2-204ENST00000474962 J3QR06 171 aa9.53□□□□□ -0.88
CLIP2-204ENST00000474962 SULT1C2O00338 296 aa9.53□□□□□ -0.88
CLIP2-204ENST00000474962 SSX5O60225 188 aa9.53□□□□□ -0.88
CLIP2-204ENST00000474962 YPEL1O60688 119 aa9.53□□□□□ -0.88
CLIP2-204ENST00000474962 HLA-DQB1P01920 261 aa9.53□□□□□ -0.88
CLIP2-204ENST00000474962 LPLP06858 475 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms