RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 OR4F17Q8NGA8 305 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 OR4F4Q96R69 305 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 GPER1Q99527 375 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 TMEM204Q9BSN7 226 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 SFXN3Q9BWM7 321 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 VN1R3Q9BXE9 311 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 STARD5Q9NSY2 213 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 TMEM100Q9NV29 134 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 MDFICQ9P1T7 246 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 SNX11Q9Y5W9 270 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 RALGAPBQ86X10 1494 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 MROH2AA6NES4 1674 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 USP6P35125 1406 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 ADGBQ8N7X0 1667 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 hADV38S2A0JD32 116 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 TSPAN11A1L157 253 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 ZNF670-ZNF695F2Z2N8 137 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 ZNF593O00488 134 aaPredicted RBP2.91□□□□□ -1.94
UBR3-208ENST00000474426 CXCL13O43927 109 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 LMX1BO60663 402 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 BCL3P20749 454 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 TSPOP30536 169 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 GPM6AP51674 278 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 RBM11P57052 281 aaKnown RBP2.91□□□□□ -1.94
UBR3-208ENST00000474426 LTBQ06643 244 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 PRDX4Q13162 271 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 KLF5Q13887 457 aaPredicted RBP2.91□□□□□ -1.94
UBR3-208ENST00000474426 ATXN7L3Q14CW9 347 aaPredicted RBP2.91□□□□□ -1.94
UBR3-208ENST00000474426 HMGN3Q15651 99 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 ZNF260Q3ZCT1 412 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 FAM27D1Q5T7N8 215 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 Q6ZUT4 128 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 PRSS41Q7RTY9 318 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 OR5A1Q8NGJ0 315 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 OR1J4Q8NGS1 313 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 RXFP2Q8WXD0 754 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 KLK6Q92876 244 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 TMEM18Q96B42 140 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 C9orf85Q96MD7 179 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 VAMP8Q9BV40 100 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 DPY30Q9C005 99 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 ZNF665Q9H7R5 613 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 AKTIPQ9H8T0 292 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 TMEM30AQ9NV96 361 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 IQGAP1P46940 1657 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 VWDEQ8N2E2 1590 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 OR2M5A3KFT3 312 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 ZNF732B4DXR9 585 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 EEF1E1-BLOC1S5C9J1V9 151 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 H3BTX0 84 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 PIRO00625 290 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 EEF1E1O43324 174 aaKnown RBP2.91□□□□□ -1.94
UBR3-208ENST00000474426 CXorf1O96002 111 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 APOA2P02652 100 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 IGFBP6P24592 240 aaPredicted RBP2.91□□□□□ -1.94
UBR3-208ENST00000474426 GDF5P43026 501 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 SLC25A35Q3KQZ1 300 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 C16orf82Q7Z2V1 217 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 DTWD1Q8N5C7 304 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 OR1L1Q8NH94 360 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 CNIH3Q8TBE1 160 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 RSPRY1Q96DX4 576 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 PGLYRP3Q96LB9 341 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 SOSTQ9BQB4 213 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 LRRC61Q9BV99 259 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 IFI27L2Q9H2X8 130 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 GLIPR2Q9H4G4 154 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 PNRC2Q9NPJ4 139 aaKnown RBP2.91□□□□□ -1.94
UBR3-208ENST00000474426 PRR13Q9NZ81 148 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 MARCH2Q9P0N8 246 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 DOCK2Q92608 1830 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 ANK1P16157 1881 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 SCN1AP35498 2009 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 LY6LH3BQJ8 138 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 K7EQS6 105 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 M0R082 166 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 TRAF3IP2O43734 574 aaPredicted RBP2.9□□□□□ -1.94
UBR3-208ENST00000474426 OR2A4O95047 310 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 APOHP02749 345 aaPredicted RBP2.9□□□□□ -1.94
UBR3-208ENST00000474426 CT45A8P0DMV1 189 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 CT45A9P0DMV2 189 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 HNRNPA3P51991 378 aaKnown RBP2.9□□□□□ -1.94
UBR3-208ENST00000474426 RPL11P62913 178 aaKnown RBP2.9□□□□□ -1.94
UBR3-208ENST00000474426 SYT14P1Q58G82 188 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 CT45A2Q5DJT8 189 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 IBA57Q5T440 356 aaKnown RBP2.9□□□□□ -1.94
UBR3-208ENST00000474426 SLC35F2Q8IXU6 374 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 PIANPQ8IYJ0 282 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 PRR22Q8IZ63 422 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 PRELID2Q8N945 189 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 LINC00116Q8NCU8 138 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 OR1J1Q8NGS3 322 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 ZNF417Q8TAU3 575 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 SRSF12Q8WXF0 261 aaKnown RBP2.9□□□□□ -1.94
UBR3-208ENST00000474426 SLAMF6Q96DU3 332 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 OR2A7Q96R45 310 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 NIPSNAP3BQ9BS92 247 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 SAMD10Q9BYL1 202 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 SAP30LQ9HAJ7 183 aa2.9□□□□□ -1.94
UBR3-208ENST00000474426 RNF181Q9P0P0 153 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms