RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 PARD6GQ9BYG4 376 aaPredicted RBP15.85■□□□□ 0.13
ECHDC1-214ENST00000474289 ULBP2Q9BZM5 246 aa15.85■□□□□ 0.13
ECHDC1-214ENST00000474289 RIMS4Q9H426 269 aaPredicted RBP15.85■□□□□ 0.13
ECHDC1-214ENST00000474289 CLEC1BQ9P126 229 aa15.85■□□□□ 0.13
ECHDC1-214ENST00000474289 EML6Q6ZMW3 1958 aa15.85■□□□□ 0.13
ECHDC1-214ENST00000474289 SPANXN5Q5MJ07 72 aa15.85■□□□□ 0.13
ECHDC1-214ENST00000474289 FAM27BQ5VT28 67 aa15.85■□□□□ 0.13
ECHDC1-214ENST00000474289 A0A1W2PR80 420 aa15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 GRIFINA4D1Z8 144 aa15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 TCF21O43680 179 aa15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 IGKV1-39P01597 117 aa15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 IGKV1D-39P04432 117 aa15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 CFHR1Q03591 330 aa15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 SRSF7Q16629 238 aaKnown RBP eCLIP15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 TMEM183BQ1AE95 376 aa15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 ANKRD37Q7Z713 158 aa15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 UCN2Q96RP3 112 aa15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 AURKAIP1Q9NWT8 199 aaPredicted RBP15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 CTXND1A0A1B0GTU2 59 aa15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 hCG_38984A0A1B0GV85 526 aa15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 NPIPA2E9PIF3 369 aa15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 NPIPA3F8WFD2 350 aa15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 MLNRO43193 412 aa15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 NPPCP23582 126 aa15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 ADMP35318 185 aa15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 TCF23Q7RTU1 214 aa15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 OR1F12Q8NHA8 337 aa15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 NEIL1Q96FI4 390 aaPredicted RBP15.84■□□□□ 0.13
ECHDC1-214ENST00000474289 YLPM1P49750 1951 aaKnown RBP15.83■□□□□ 0.13
ECHDC1-214ENST00000474289 KIR2DS1A0A191URI9 304 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 CD300LBA8K4G0 201 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 PAGE4O60829 102 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 CDKN1AP38936 164 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 KIR2DS4P43632 304 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 SLC38A11Q08AI6 406 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 KIR2DS1Q14954 304 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 FBXW9Q5XUX1 488 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 PCSK4Q6UW60 755 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 LINC01551Q86U37 167 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 MYPOPQ86VE0 399 aaPredicted RBP15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 NEK7Q8TDX7 302 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 HS3ST6Q96QI5 342 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 DNAJC4Q9NNZ3 241 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 TP53TG3Q9ULZ0 132 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 ZFP30Q9Y2G7 519 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 ATP23Q9Y6H3 246 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 ABCA7Q8IZY2 2146 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 PATE4P0C8F1 98 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 SOX8P57073 446 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 NUFIP2Q7Z417 695 aaKnown RBP15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 VAMP8Q9BV40 100 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 TIMM9Q9Y5J7 89 aa15.83■□□□□ 0.12
ECHDC1-214ENST00000474289 BCL3P20749 454 aa15.82■□□□□ 0.12
ECHDC1-214ENST00000474289 S100GP29377 79 aa15.82■□□□□ 0.12
ECHDC1-214ENST00000474289 LINC00310P59036 64 aa15.82■□□□□ 0.12
ECHDC1-214ENST00000474289 COL5A1-AS1Q5SY13 56 aa15.82■□□□□ 0.12
ECHDC1-214ENST00000474289 OR8G2PQ6IF36 304 aa15.82■□□□□ 0.12
ECHDC1-214ENST00000474289 OR51B6Q9H340 312 aa15.82■□□□□ 0.12
ECHDC1-214ENST00000474289 IL36RNQ9UBH0 155 aa15.82■□□□□ 0.12
ECHDC1-214ENST00000474289 IGKV1-5P01602 117 aa15.82■□□□□ 0.12
ECHDC1-214ENST00000474289 MYF5P13349 255 aa15.82■□□□□ 0.12
ECHDC1-214ENST00000474289 RANP62826 216 aaKnown RBP15.82■□□□□ 0.12
ECHDC1-214ENST00000474289 C17orf82Q86X59 251 aaPredicted RBP15.82■□□□□ 0.12
ECHDC1-214ENST00000474289 ZDHHC23Q8IYP9 409 aa15.82■□□□□ 0.12
ECHDC1-214ENST00000474289 PCED1AQ9H1Q7 454 aa15.82■□□□□ 0.12
ECHDC1-214ENST00000474289 IGLV3-19P01714 112 aa15.81■□□□□ 0.12
ECHDC1-214ENST00000474289 WNT2P09544 360 aa15.81■□□□□ 0.12
ECHDC1-214ENST00000474289 CTXN2P0C2S0 81 aa15.81■□□□□ 0.12
ECHDC1-214ENST00000474289 RAB7AP51149 207 aa15.81■□□□□ 0.12
ECHDC1-214ENST00000474289 TPPP2P59282 170 aa15.81■□□□□ 0.12
ECHDC1-214ENST00000474289 TRIM61Q5EBN2 209 aa15.81■□□□□ 0.12
ECHDC1-214ENST00000474289 C11orf42Q8N5U0 333 aa15.81■□□□□ 0.12
ECHDC1-214ENST00000474289 OR10G9Q8NGN4 311 aa15.81■□□□□ 0.12
ECHDC1-214ENST00000474289 OR10G7Q8NGN6 311 aa15.81■□□□□ 0.12
ECHDC1-214ENST00000474289 VN1R17PQ8TDU5 208 aa15.81■□□□□ 0.12
ECHDC1-214ENST00000474289 LSM10Q969L4 123 aaKnown RBP15.81■□□□□ 0.12
ECHDC1-214ENST00000474289 DIDO1Q9BTC0 2240 aaKnown RBP15.81■□□□□ 0.12
ECHDC1-214ENST00000474289 CD99P14209 185 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 FOXL1Q12952 345 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 ZNF468Q5VIY5 522 aaPredicted RBP15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 PRAMEF20Q5VT98 475 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 HSPB9Q9BQS6 159 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 ELOVL5Q9NYP7 299 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 OR2W1Q9Y3N9 320 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 ZNF816-ZNF321PA0A0X1KG74 233 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 LNP1A1A4G5 178 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 FAM90A10PA6NDY2 464 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 FAM90A18PA6NE21 464 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 FAM90A16PA6NEW6 464 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 FAM90A20PA6NIJ5 464 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 FAM90A8PA6NJQ4 464 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 FAM90A7PA6NKC0 464 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 FAM90A22PA8MWA6 464 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 FAM90A12PA8MX19 464 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 FAM90A5PA8MXJ8 464 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 FAM90A23PA8MXZ1 464 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 HS3ST1O14792 307 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 FAM90A15PP0C7V4 464 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 FAM90A13PP0C7W8 464 aa15.8■□□□□ 0.12
ECHDC1-214ENST00000474289 FAM90A14PP0C7W9 464 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms