RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 FAM104AQ969W3 186 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 DDIT4LQ96D03 193 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 HAVCR1Q96D42 359 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 CMBLQ96DG6 245 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 SLAMF6Q96DU3 332 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 FAM122AQ96E09 287 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 SLC25A44Q96H78 314 aaPredicted RBP1.09□□□□□ -2.23
CCDC39-203ENST00000473854 LURAP1Q96LR2 239 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 JSRP1Q96MG2 331 aaPredicted RBP1.09□□□□□ -2.23
CCDC39-203ENST00000473854 SPACA5Q96QH8 159 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 CITED2Q99967 270 aaPredicted RBP1.09□□□□□ -2.23
CCDC39-203ENST00000473854 GAL3ST1Q99999 423 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 NICN1Q9BSH3 213 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 MARVELD1Q9BSK0 173 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF416Q9BWM5 594 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 PAPOLGQ9BWT3 736 aaKnown RBP1.09□□□□□ -2.23
CCDC39-203ENST00000473854 BEX2Q9BXY8 128 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 POTEKPQ9BYX7 375 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 TTTY12Q9BZ98 90 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 PBOV1Q9GZY1 135 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 SLC22A4Q9H015 551 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 FXYD6Q9H0Q3 95 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 C20orf85Q9H1P6 137 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 FNDC4Q9H6D8 234 aaPredicted RBP1.09□□□□□ -2.23
CCDC39-203ENST00000473854 METTL17Q9H7H0 456 aaPredicted RBP1.09□□□□□ -2.23
CCDC39-203ENST00000473854 PTGES2Q9H7Z7 377 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 NIPAL2Q9H841 368 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 FN3KRPQ9HA64 309 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 PLEKHA1Q9HB21 404 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 HRASLSQ9HDD0 168 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 GPR84Q9NQS5 396 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 SLC17A5Q9NRA2 495 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 PLSCR3Q9NRY6 295 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 CA10Q9NS85 328 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF275Q9NSD4 429 aaPredicted RBP1.09□□□□□ -2.23
CCDC39-203ENST00000473854 TMEM38BQ9NVV0 291 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 RBFOX1Q9NWB1 397 aaKnown RBP1.09□□□□□ -2.23
CCDC39-203ENST00000473854 MCUBQ9NWR8 336 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 HPF1Q9NWY4 346 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 B3GNT2Q9NY97 397 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 GLTPQ9NZD2 209 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 ABRACLQ9P1F3 81 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 DHRS4-AS1Q9P1J3 65 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 NUFIP1Q9UHK0 495 aaKnown RBP1.09□□□□□ -2.23
CCDC39-203ENST00000473854 DKKL1Q9UK85 242 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 OR52A1Q9UKL2 312 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 ANAPC10Q9UM13 185 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 SPATA2Q9UM82 520 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 FLVCR2Q9UPI3 526 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 FOXJ3Q9UPW0 622 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 FARSAQ9Y285 508 aaKnown RBP1.09□□□□□ -2.23
CCDC39-203ENST00000473854 GSTK1Q9Y2Q3 226 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 HDGFL3Q9Y3E1 203 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 FLVCR1Q9Y5Y0 555 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 ETV7Q9Y603 341 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 CACNG2Q9Y698 323 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 TMEM14AQ9Y6G1 99 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 C2CD3Q4AC94 2353 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 APOBP04114 4563 aaKnown RBP1.09□□□□□ -2.23
CCDC39-203ENST00000473854 PKHD1L1Q86WI1 4243 aa1.09□□□□□ -2.24
CCDC39-203ENST00000473854 STAB1Q9NY15 2570 aa1.09□□□□□ -2.24
CCDC39-203ENST00000473854 PKHD1P08F94 4074 aa1.09□□□□□ -2.24
CCDC39-203ENST00000473854 RYR2Q92736 4967 aa1.09□□□□□ -2.24
CCDC39-203ENST00000473854 FN1P02751 2386 aaKnown RBP1.08□□□□□ -2.24
CCDC39-203ENST00000473854 BAHCC1Q9P281 2608 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 IGKV1-12A0A0C4DH73 117 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 A0A1B0GUH1 482 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 LOC102725191A0A1B0GVB3 256 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 A0A1B0GVI7 797 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM269A0A1B0GVZ9 245 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 ANKRD20A5PA0PJZ0 165 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 A4D1N5 150 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM235A6NFC5 223 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 GGT3PA6NGU5 568 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM14DPA8MWL7 114 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 CENPBD1B2RD01 187 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 FAM25AB3EWG3 89 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 FAM25CB3EWG5 89 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 FAM25GB3EWG6 89 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 NPIPA2E9PIF3 369 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 F5H5K5 113 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 INMT-MINDY4F8WBC2 141 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 H7C417 338 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 K7EM74 188 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 M0R135 149 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 SULT2B1O00204 365 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 MFNGO00587 321 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 ARPC1BO15143 372 aaKnown RBP1.08□□□□□ -2.24
CCDC39-203ENST00000473854 SOCS1O15524 211 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 SYT7O43581 403 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 SULT1B1O43704 296 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 ANGPTL7O43827 346 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 ORC5O43913 435 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 SS18L1O75177 396 aaPredicted RBP1.08□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF253O75346 499 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 CBR3O75828 277 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 TRAPPC6AO75865 159 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 DHRS3O75911 302 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 ARL6IP5O75915 188 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 KBTBD11O94819 623 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms