RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, human

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-213	ENST00000473598	LRRC37A5P	Q49AS3	106 aa		12.51	□□□□□ -0.41
LMNA-213	ENST00000473598	WDR86	Q86TI4	376 aa		12.51	□□□□□ -0.41
LMNA-213	ENST00000473598	MRPL24	Q96A35	216 aa	Known RBP	12.51	□□□□□ -0.41
LMNA-213	ENST00000473598	ATG101	Q9BSB4	218 aa		12.51	□□□□□ -0.41
LMNA-213	ENST00000473598	URM1	Q9BTM9	101 aa	Known RBP	12.51	□□□□□ -0.41
LMNA-213	ENST00000473598	MSL2	Q9HCI7	577 aa		12.51	□□□□□ -0.41
LMNA-213	ENST00000473598	DCHS2	Q6V1P9	2916 aa		12.51	□□□□□ -0.41
LMNA-213	ENST00000473598	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	SMCO3	A2RU48	225 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	AMY2A	P04746	511 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	PGAM2	P15259	253 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	COL8A1	P27658	744 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	SELENOV	P59797	346 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	JOSD1	Q15040	202 aa	Predicted RBP	12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	TRAPPC6B	Q86SZ2	158 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	MKX	Q8IYA7	352 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	OR4S1	Q8NGB4	309 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	TM2D1	Q9BX74	207 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	CENPE	Q02224	2701 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	LRP5L	A4QPB2	252 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	SHISA9	B4DS77	424 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598		M0QZK8	103 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	GGCT	O75223	188 aa	Known RBP	12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	OR2C1	O95371	312 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	CD3E	P07766	207 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	LPAR6	P43657	344 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	IL24	Q13007	206 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	HIST2H2BC	Q6DN03	193 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	FAM89B	Q8N5H3	189 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	LYPD6B	Q8NI32	183 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	RNASEH2C	Q8TDP1	164 aa	Known RBP	12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	SECTM1	Q8WVN6	248 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	PKIB	Q9C010	78 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	CXXC4	Q9H2H0	198 aa		12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	CHD3	Q12873	2000 aa	Known RBP	12.5	□□□□□ -0.41
LMNA-213	ENST00000473598	CELSR2	Q9HCU4	2923 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	ITGB1BP1	O14713	200 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	SOCS1	O15524	211 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	SOD3	P08294	240 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	SULT1A2	P50226	295 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	TMEM50B	P56557	158 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	ZNF154	Q13106	437 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	DHRS2	Q13268	280 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	MEF2D	Q14814	521 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	PLAC9	Q5JTB6	97 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	RTN4RL2	Q86UN3	420 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	GVQW1	Q8N7I0	195 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598		Q8NFD4	153 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	OR51T1	Q8NGJ9	327 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	SLC6A7	Q99884	636 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	SNHG12	Q9BXW3	62 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	ACTR3C	Q9C0K3	210 aa	Predicted RBP	12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	SLC2A8	Q9NY64	477 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	MTCH1	Q9NZJ7	389 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	TAAR3P	Q9P1P4	343 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598		A0A0B4J2A0	478 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598		A0A1W2PPE2	198 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598		J3QT63	122 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	SYNGR1	O43759	233 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	ARG1	P05089	322 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	GSTP1	P09211	210 aa	Known RBP	12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	GABRR1	P24046	479 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	NPBWR2	P48146	333 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	ADIPOQ	Q15848	244 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	OSR2	Q8N2R0	312 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	SCCPDH	Q8NBX0	429 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	OR13C8	Q8NGS7	320 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598		Q96M66	194 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	SHPK	Q9UHJ6	478 aa		12.49	□□□□□ -0.41
LMNA-213	ENST00000473598	PHOX2A	O14813	284 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	SIAH2	O43255	324 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	HIST1H2BK	O60814	126 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	HIST1H2BJ	P06899	126 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	OR4A8	P0C604	315 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	DAO	P14920	347 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	HIST1H1D	P16402	221 aa	Known RBP	12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	BCL3	P20749	454 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	HIST1H2BO	P23527	126 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	PSMB6	P28072	239 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	HIST1H2BB	P33778	126 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	HIST1H2BD	P58876	126 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	HIST1H2BC	P62807	126 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	MZT1	Q08AG7	82 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	HIST2H2BE	Q16778	126 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	AKR1C8P	Q5T2L2	129 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	ZNF664	Q8N3J9	261 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	OR2Z1	Q8NG97	314 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	DCUN1D4	Q92564	292 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	HIST1H2BH	Q93079	126 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	PACRG	Q96M98	296 aa	Predicted RBP	12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	HIST1H2BN	Q99877	126 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	HIST1H2BM	Q99879	126 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	GAL3ST2	Q9H3Q3	398 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	PLK3	Q9H4B4	646 aa		12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	CHTOP	Q9Y3Y2	248 aa	Known RBP	12.48	□□□□□ -0.41
LMNA-213	ENST00000473598	FOXI3	A8MTJ6	420 aa	Predicted RBP	12.47	□□□□□ -0.41
LMNA-213	ENST00000473598	VSTM5	A8MXK1	200 aa		12.47	□□□□□ -0.41
LMNA-213	ENST00000473598	TRAPPC2L	H3BP13	241 aa		12.47	□□□□□ -0.41
LMNA-213	ENST00000473598	RHBDL1	O75783	438 aa		12.47	□□□□□ -0.41

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