RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 LY86O95711 162 aa17.9■□□□□ 0.46
COL18A1-207ENST00000473212 IGKV1-5P01602 117 aa17.9■□□□□ 0.46
COL18A1-207ENST00000473212 IGLV2-14P01704 120 aa17.9■□□□□ 0.46
COL18A1-207ENST00000473212 ZNF16P17020 682 aaPredicted RBP17.9■□□□□ 0.46
COL18A1-207ENST00000473212 CA6P23280 308 aa17.9■□□□□ 0.46
COL18A1-207ENST00000473212 PNRC1Q12796 327 aaPredicted RBP17.9■□□□□ 0.46
COL18A1-207ENST00000473212 FAM58AQ8N1B3 248 aa17.9■□□□□ 0.46
COL18A1-207ENST00000473212 MBD3L1Q8WWY6 194 aa17.9■□□□□ 0.46
COL18A1-207ENST00000473212 PLK3Q9H4B4 646 aa17.9■□□□□ 0.46
COL18A1-207ENST00000473212 SDF2L1Q9HCN8 221 aa17.9■□□□□ 0.46
COL18A1-207ENST00000473212 BOKQ9UMX3 212 aaPredicted RBP17.9■□□□□ 0.46
COL18A1-207ENST00000473212 TRBV6-6A0A0A6YYG2 114 aa17.89■□□□□ 0.45
COL18A1-207ENST00000473212 A0A1W2PNU3 283 aaPredicted RBP17.89■□□□□ 0.45
COL18A1-207ENST00000473212 CEBPZOSA8MTT3 80 aa17.89■□□□□ 0.45
COL18A1-207ENST00000473212 YKT6O15498 198 aa17.89■□□□□ 0.45
COL18A1-207ENST00000473212 CER1O95813 267 aa17.89■□□□□ 0.45
COL18A1-207ENST00000473212 FABP4P15090 132 aa17.89■□□□□ 0.45
COL18A1-207ENST00000473212 RND2P52198 227 aa17.89■□□□□ 0.45
COL18A1-207ENST00000473212 ZNF880Q6PDB4 577 aa17.89■□□□□ 0.45
COL18A1-207ENST00000473212 LILRB2Q8N423 598 aa17.89■□□□□ 0.45
COL18A1-207ENST00000473212 OR1K1Q8NGR3 316 aa17.89■□□□□ 0.45
COL18A1-207ENST00000473212 LINC00470Q9BZP3 86 aa17.89■□□□□ 0.45
COL18A1-207ENST00000473212 PRDM13Q9H4Q3 707 aa17.89■□□□□ 0.45
COL18A1-207ENST00000473212 MRPS18CQ9Y3D5 142 aaKnown RBP17.89■□□□□ 0.45
COL18A1-207ENST00000473212 DOCK11Q5JSL3 2073 aa17.89■□□□□ 0.45
COL18A1-207ENST00000473212 ELOA3CA0A087WX78 387 aaPredicted RBP17.89■□□□□ 0.45
COL18A1-207ENST00000473212 MDKP21741 143 aaPredicted RBP17.89■□□□□ 0.45
COL18A1-207ENST00000473212 MDH2P40926 338 aaKnown RBP17.89■□□□□ 0.45
COL18A1-207ENST00000473212 CABLES2Q9BTV7 478 aa17.89■□□□□ 0.45
COL18A1-207ENST00000473212 TTTY12Q9BZ98 90 aa17.89■□□□□ 0.45
COL18A1-207ENST00000473212 A0A1W2PR80 420 aa17.88■□□□□ 0.45
COL18A1-207ENST00000473212 SS18L1O75177 396 aaPredicted RBP17.88■□□□□ 0.45
COL18A1-207ENST00000473212 IGHEP01854 428 aa17.88■□□□□ 0.45
COL18A1-207ENST00000473212 ELLP55199 621 aaPredicted RBP17.88■□□□□ 0.45
COL18A1-207ENST00000473212 FAM53AQ6NSI3 398 aaPredicted RBP17.88■□□□□ 0.45
COL18A1-207ENST00000473212 LINC00596Q86U02 117 aa17.88■□□□□ 0.45
COL18A1-207ENST00000473212 LSM10Q969L4 123 aaKnown RBP17.88■□□□□ 0.45
COL18A1-207ENST00000473212 TMEM242Q9NWH2 141 aa17.88■□□□□ 0.45
COL18A1-207ENST00000473212 USF3Q68DE3 2245 aa17.88■□□□□ 0.45
COL18A1-207ENST00000473212 OR5H1A6NKK0 313 aa17.88■□□□□ 0.45
COL18A1-207ENST00000473212 B4E171 279 aa17.88■□□□□ 0.45
COL18A1-207ENST00000473212 PTBP3O95758 552 aaKnown RBP17.88■□□□□ 0.45
COL18A1-207ENST00000473212 PGA5P0DJD9 388 aa17.88■□□□□ 0.45
COL18A1-207ENST00000473212 TSPAN7P41732 249 aa17.88■□□□□ 0.45
COL18A1-207ENST00000473212 TLE1Q04724 770 aa17.88■□□□□ 0.45
COL18A1-207ENST00000473212 LRRC75BQ2VPJ9 315 aa17.88■□□□□ 0.45
COL18A1-207ENST00000473212 PSMG3Q9BT73 122 aaPredicted RBP17.88■□□□□ 0.45
COL18A1-207ENST00000473212 RBM7Q9Y580 266 aaKnown RBP17.88■□□□□ 0.45
COL18A1-207ENST00000473212 C9orf172C9J069 976 aa17.87■□□□□ 0.45
COL18A1-207ENST00000473212 DEFA6Q01524 100 aa17.87■□□□□ 0.45
COL18A1-207ENST00000473212 TESK1Q15569 626 aa17.87■□□□□ 0.45
COL18A1-207ENST00000473212 SPANXN5Q5MJ07 72 aa17.87■□□□□ 0.45
COL18A1-207ENST00000473212 BEND4Q6ZU67 534 aa17.87■□□□□ 0.45
COL18A1-207ENST00000473212 TMEM251Q8N6I4 163 aa17.87■□□□□ 0.45
COL18A1-207ENST00000473212 APH1AQ96BI3 265 aa17.87■□□□□ 0.45
COL18A1-207ENST00000473212 KCNS2Q9ULS6 477 aa17.87■□□□□ 0.45
COL18A1-207ENST00000473212 ANKRD30BLA7E2S9 258 aa17.87■□□□□ 0.45
COL18A1-207ENST00000473212 DEGS1O15121 323 aa17.87■□□□□ 0.45
COL18A1-207ENST00000473212 LAMTOR5O43504 91 aa17.87■□□□□ 0.45
COL18A1-207ENST00000473212 COX5BP10606 129 aa17.87■□□□□ 0.45
COL18A1-207ENST00000473212 HIST1H1BP16401 226 aaKnown RBP17.87■□□□□ 0.45
COL18A1-207ENST00000473212 HOXA6P31267 233 aa17.87■□□□□ 0.45
COL18A1-207ENST00000473212 GPX4P36969 197 aaPredicted RBP17.87■□□□□ 0.45
COL18A1-207ENST00000473212 OR1C1Q15619 314 aa17.87■□□□□ 0.45
COL18A1-207ENST00000473212 ZNF573Q86YE8 665 aa17.87■□□□□ 0.45
COL18A1-207ENST00000473212 FAM173AQ9BQD7 235 aa17.87■□□□□ 0.45
COL18A1-207ENST00000473212 RBKSQ9H477 322 aa17.87■□□□□ 0.45
COL18A1-207ENST00000473212 GFOD1Q9NXC2 390 aa17.87■□□□□ 0.45
COL18A1-207ENST00000473212 VAX2Q9UIW0 290 aa17.87■□□□□ 0.45
COL18A1-207ENST00000473212 RNF150Q9ULK6 438 aa17.87■□□□□ 0.45
COL18A1-207ENST00000473212 SIRPB1O00241 398 aa17.86■□□□□ 0.45
COL18A1-207ENST00000473212 HBG1P69891 147 aa17.86■□□□□ 0.45
COL18A1-207ENST00000473212 HBG2P69892 147 aa17.86■□□□□ 0.45
COL18A1-207ENST00000473212 ZNF585BQ52M93 769 aa17.86■□□□□ 0.45
COL18A1-207ENST00000473212 RHOVQ96L33 236 aa17.86■□□□□ 0.45
COL18A1-207ENST00000473212 SNX22Q96L94 193 aa17.86■□□□□ 0.45
COL18A1-207ENST00000473212 OR4C12Q96R67 309 aa17.86■□□□□ 0.45
COL18A1-207ENST00000473212 PIGBOS1A0A0B4J2F0 54 aa17.86■□□□□ 0.45
COL18A1-207ENST00000473212 MAP1LC3B2A6NCE7 125 aa17.86■□□□□ 0.45
COL18A1-207ENST00000473212 TECTAO75443 2155 aa17.86■□□□□ 0.45
COL18A1-207ENST00000473212 GNG3P63215 75 aa17.86■□□□□ 0.45
COL18A1-207ENST00000473212 PEAR1Q5VY43 1037 aaPredicted RBP17.86■□□□□ 0.45
COL18A1-207ENST00000473212 S100PBPQ96BU1 408 aa17.86■□□□□ 0.45
COL18A1-207ENST00000473212 P2RX4Q99571 388 aa17.86■□□□□ 0.45
COL18A1-207ENST00000473212 MAP1LC3BQ9GZQ8 125 aa17.86■□□□□ 0.45
COL18A1-207ENST00000473212 PHOX2AO14813 284 aa17.85■□□□□ 0.45
COL18A1-207ENST00000473212 SYNGR4O95473 234 aa17.85■□□□□ 0.45
COL18A1-207ENST00000473212 MT-CO3P00414 261 aa17.85■□□□□ 0.45
COL18A1-207ENST00000473212 SERF2P84101 59 aa17.85■□□□□ 0.45
COL18A1-207ENST00000473212 GAMTQ14353 236 aa17.85■□□□□ 0.45
COL18A1-207ENST00000473212 TMEM41BQ5BJD5 291 aa17.85■□□□□ 0.45
COL18A1-207ENST00000473212 ZNF600Q6ZNG1 722 aa17.85■□□□□ 0.45
COL18A1-207ENST00000473212 MRGPRGQ86SM5 289 aa17.85■□□□□ 0.45
COL18A1-207ENST00000473212 WDR86Q86TI4 376 aa17.85■□□□□ 0.45
COL18A1-207ENST00000473212 WDR61Q9GZS3 305 aaKnown RBP17.85■□□□□ 0.45
COL18A1-207ENST00000473212 BOD1L1Q8NFC6 3051 aa17.85■□□□□ 0.45
COL18A1-207ENST00000473212 KMT2EQ8IZD2 1858 aa17.85■□□□□ 0.45
COL18A1-207ENST00000473212 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.84■□□□□ 0.45
COL18A1-207ENST00000473212 WDR1O75083 606 aa17.84■□□□□ 0.45
COL18A1-207ENST00000473212 CELA3BP08861 270 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms