RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 CHODLQ9H9P2 273 aa12.12□□□□□ -0.47
HIF3A-206ENST00000472815 COL12A1Q99715 3063 aa12.12□□□□□ -0.47
HIF3A-206ENST00000472815 GCN1Q92616 2671 aaKnown RBP12.12□□□□□ -0.47
HIF3A-206ENST00000472815 A0A1B0GW55 424 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 DUXBA0A1W2PPF3 345 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 ITGB1BP1O14713 200 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 PGLYRP1O75594 196 aaPredicted RBP12.11□□□□□ -0.47
HIF3A-206ENST00000472815 RP2O75695 350 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 IGHV2-70P01814 119 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 DUX4L2P0CJ85 424 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 DUX4L3P0CJ86 424 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 DUX4L4P0CJ87 422 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 DUX4L5P0CJ88 424 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 DUX4L6P0CJ89 424 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 DUX4L7P0CJ90 424 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 RNF224P0DH78 156 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 PET100P0DJ07 73 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 F2RP25116 425 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 PPP1CCP36873 323 aaKnown RBP12.11□□□□□ -0.47
HIF3A-206ENST00000472815 RAB7AP51149 207 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 CATR1Q13166 79 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 DUX4L9Q6RFH8 374 aaPredicted RBP12.11□□□□□ -0.47
HIF3A-206ENST00000472815 ZNF695Q8IW36 515 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 OR52M1Q8NGK5 317 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 DCTN5Q9BTE1 182 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 OR2D2Q9H210 308 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 DUX4Q9UBX2 424 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 MIOXQ9UGB7 285 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 TMED3Q9Y3Q3 217 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 TRBV23-1A0A0A0MS06 115 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 A0A1W2PPH5 198 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 DVL1O14640 695 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 HOXB5P09067 269 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 CGB3P0DN86 165 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 CGB7P0DN87 165 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 TMEM33P57088 247 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 SP6Q3SY56 376 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 TMEM155Q4W5P6 130 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 GLYATL2Q8WU03 294 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 H1FXQ92522 213 aaKnown RBP12.11□□□□□ -0.47
HIF3A-206ENST00000472815 IL22RA2Q969J5 263 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 C2orf50Q96LR7 162 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 ZNF714Q96N38 554 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 PLEKHF2Q9H8W4 249 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 LINC00574Q9H8X3 128 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 IDI2-AS1Q9NZ38 188 aa12.11□□□□□ -0.47
HIF3A-206ENST00000472815 FASNP49327 2511 aaKnown RBP12.1□□□□□ -0.47
HIF3A-206ENST00000472815 DOPEY2Q9Y3R5 2298 aa12.1□□□□□ -0.47
HIF3A-206ENST00000472815 IGHV3-43A0A0B4J1X8 118 aa12.1□□□□□ -0.47
HIF3A-206ENST00000472815 SERPINE2P07093 398 aa12.1□□□□□ -0.47
HIF3A-206ENST00000472815 IGHV3-43DP0DP04 118 aa12.1□□□□□ -0.47
HIF3A-206ENST00000472815 UCP1P25874 307 aa12.1□□□□□ -0.47
HIF3A-206ENST00000472815 GNMTQ14749 295 aa12.1□□□□□ -0.47
HIF3A-206ENST00000472815 LTC4SQ16873 150 aa12.1□□□□□ -0.47
HIF3A-206ENST00000472815 MORN2Q502X0 79 aa12.1□□□□□ -0.47
HIF3A-206ENST00000472815 TCTEX1D1Q8N7M0 179 aa12.1□□□□□ -0.47
HIF3A-206ENST00000472815 THAP6Q8TBB0 222 aa12.1□□□□□ -0.47
HIF3A-206ENST00000472815 MSI2Q96DH6 328 aaKnown RBP12.1□□□□□ -0.47
HIF3A-206ENST00000472815 SEC22AQ96IW7 307 aa12.1□□□□□ -0.47
HIF3A-206ENST00000472815 TMEM56Q96MV1 263 aa12.1□□□□□ -0.47
HIF3A-206ENST00000472815 TP53RKQ96S44 253 aa12.1□□□□□ -0.47
HIF3A-206ENST00000472815 GFOD1Q9NXC2 390 aa12.1□□□□□ -0.47
HIF3A-206ENST00000472815 TMEM56-RWDD3S4R434 201 aa12.1□□□□□ -0.47
HIF3A-206ENST00000472815 A0A1W2PPR1 153 aa12.09□□□□□ -0.47
HIF3A-206ENST00000472815 HMSDA8MTL9 139 aa12.09□□□□□ -0.47
HIF3A-206ENST00000472815 LYNX1G3V0Z9 82 aa12.09□□□□□ -0.47
HIF3A-206ENST00000472815 PPIHO43447 177 aaKnown RBP12.09□□□□□ -0.47
HIF3A-206ENST00000472815 TNFSF12O43508 249 aa12.09□□□□□ -0.47
HIF3A-206ENST00000472815 ADAP1O75689 374 aa12.09□□□□□ -0.47
HIF3A-206ENST00000472815 F12P00748 615 aaPredicted RBP12.09□□□□□ -0.47
HIF3A-206ENST00000472815 LYNX1P0DP58 116 aa12.09□□□□□ -0.47
HIF3A-206ENST00000472815 EFNA4P52798 201 aa12.09□□□□□ -0.47
HIF3A-206ENST00000472815 C17orf58Q2M2W7 97 aa12.09□□□□□ -0.47
HIF3A-206ENST00000472815 ESCO2Q56NI9 601 aa12.09□□□□□ -0.47
HIF3A-206ENST00000472815 LYPD2Q6UXB3 125 aa12.09□□□□□ -0.47
HIF3A-206ENST00000472815 DRAM1Q8N682 238 aa12.09□□□□□ -0.47
HIF3A-206ENST00000472815 OR8B3Q8NGG8 313 aa12.09□□□□□ -0.47
HIF3A-206ENST00000472815 PPP1R1CQ8WVI7 109 aa12.09□□□□□ -0.47
HIF3A-206ENST00000472815 OR8B2Q96RD0 313 aa12.09□□□□□ -0.47
HIF3A-206ENST00000472815 SPIN2AQ99865 258 aa12.09□□□□□ -0.47
HIF3A-206ENST00000472815 SPIN2BQ9BPZ2 258 aa12.09□□□□□ -0.47
HIF3A-206ENST00000472815 ZFP57Q9NU63 452 aa12.09□□□□□ -0.47
HIF3A-206ENST00000472815 PRR13Q9NZ81 148 aa12.09□□□□□ -0.47
HIF3A-206ENST00000472815 SPTAN1Q13813 2472 aaKnown RBP12.09□□□□□ -0.47
HIF3A-206ENST00000472815 CDS2O95674 445 aa12.08□□□□□ -0.47
HIF3A-206ENST00000472815 RPA2P15927 270 aa12.08□□□□□ -0.47
HIF3A-206ENST00000472815 GPR12P47775 334 aa12.08□□□□□ -0.47
HIF3A-206ENST00000472815 LOXL3P58215 753 aa12.08□□□□□ -0.47
HIF3A-206ENST00000472815 IAH1Q2TAA2 248 aaPredicted RBP12.08□□□□□ -0.47
HIF3A-206ENST00000472815 TMEM268Q5VZI3 342 aa12.08□□□□□ -0.47
HIF3A-206ENST00000472815 GGNBP1Q5YKI7 109 aa12.08□□□□□ -0.47
HIF3A-206ENST00000472815 ZNF66Q6ZN08 573 aa12.08□□□□□ -0.47
HIF3A-206ENST00000472815 OR51H1Q8NH63 302 aa12.08□□□□□ -0.47
HIF3A-206ENST00000472815 RBPMSQ93062 196 aaKnown RBP12.08□□□□□ -0.47
HIF3A-206ENST00000472815 NEIL1Q96FI4 390 aaPredicted RBP12.08□□□□□ -0.47
HIF3A-206ENST00000472815 C18orf12Q96KH6 178 aa12.08□□□□□ -0.47
HIF3A-206ENST00000472815 HSD17B10Q99714 261 aaKnown RBP12.08□□□□□ -0.47
HIF3A-206ENST00000472815 PSG11Q9UQ72 335 aa12.08□□□□□ -0.47
HIF3A-206ENST00000472815 HSPB11Q9Y547 144 aa12.08□□□□□ -0.47
HIF3A-206ENST00000472815 FXYD6-FXYD2A0A087WZ82 144 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms