RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 OAZ3Q9UMX2 235 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 A0A1W2PN81 502 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 IZUMO1RA6ND01 250 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 AIPO00170 330 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 NBR2O15453 112 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 TXNL1O43396 289 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 ATP8B1O43520 1251 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 HSPB1P04792 205 aaKnown RBP7.1□□□□□ -1.27
VCL-204ENST00000472585 H2AFB1P0C5Y9 115 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 H2AFB2P0C5Z0 115 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 SERPINA2P20848 420 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 FASP25445 335 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 IL3RAP26951 378 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 CHRNA7P36544 502 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 RNLSQ5VYX0 342 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 STEAP3Q658P3 488 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 SIGIRRQ6IA17 410 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 LINC00322Q6ZN03 302 aaPredicted RBP7.1□□□□□ -1.27
VCL-204ENST00000472585 SYS1Q8N2H4 156 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 PRR18Q8N4B5 295 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 TSEN15Q8WW01 171 aaKnown RBP7.1□□□□□ -1.27
VCL-204ENST00000472585 TRUB1Q8WWH5 349 aaKnown RBP7.1□□□□□ -1.27
VCL-204ENST00000472585 FAM110AQ9BQ89 295 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 ZNF251Q9BRH9 671 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 FAM103A1Q9BTL3 118 aaKnown RBP7.1□□□□□ -1.27
VCL-204ENST00000472585 METTL9Q9H1A3 318 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 FBXL15Q9H469 300 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 ERVK13-1Q9NX77 482 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 GNG12Q9UBI6 72 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 ADAM30Q9UKF2 790 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 STUB1Q9UNE7 303 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 MRPS28Q9Y2Q9 187 aaKnown RBP7.1□□□□□ -1.27
VCL-204ENST00000472585 AP4S1Q9Y587 144 aa7.1□□□□□ -1.27
VCL-204ENST00000472585 SAC3D1A6NKF1 404 aa7.09□□□□□ -1.27
VCL-204ENST00000472585 TMEM212A6NML5 194 aa7.09□□□□□ -1.27
VCL-204ENST00000472585 IGFBP3P17936 291 aaPredicted RBP7.09□□□□□ -1.27
VCL-204ENST00000472585 ZNF93P35789 620 aaPredicted RBP7.09□□□□□ -1.27
VCL-204ENST00000472585 PPP1CCP36873 323 aaKnown RBP7.09□□□□□ -1.27
VCL-204ENST00000472585 SLC22A6Q4U2R8 563 aa7.09□□□□□ -1.27
VCL-204ENST00000472585 ZNF833PQ6ZTB9 187 aa7.09□□□□□ -1.27
VCL-204ENST00000472585 GTSCR1Q86UQ5 136 aa7.09□□□□□ -1.27
VCL-204ENST00000472585 OR13C5Q8NGS8 318 aa7.09□□□□□ -1.27
VCL-204ENST00000472585 ST6GALNAC5Q9BVH7 336 aa7.09□□□□□ -1.27
VCL-204ENST00000472585 SSBP4Q9BWG4 385 aaPredicted RBP7.09□□□□□ -1.27
VCL-204ENST00000472585 HIPK2Q9H2X6 1198 aa7.09□□□□□ -1.27
VCL-204ENST00000472585 TAF9BQ9HBM6 251 aa7.09□□□□□ -1.27
VCL-204ENST00000472585 OR2S2Q9NQN1 319 aa7.09□□□□□ -1.27
VCL-204ENST00000472585 TRAPPC2LQ9UL33 140 aa7.09□□□□□ -1.27
VCL-204ENST00000472585 FOXA2Q9Y261 457 aaPredicted RBP7.09□□□□□ -1.27
VCL-204ENST00000472585 A3GALT2U3KPV4 340 aa7.09□□□□□ -1.27
VCL-204ENST00000472585 KMT2AQ03164 3969 aa7.09□□□□□ -1.28
VCL-204ENST00000472585 TRAV8-7A0A075B6U6 113 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 SPINT2O43291 252 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 PROP1O75360 226 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 SC5DO75845 299 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 ALPLP05186 524 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 RPSAP08865 295 aaKnown RBP7.08□□□□□ -1.28
VCL-204ENST00000472585 LIMS3P0CW19 117 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 LIMS4P0CW20 117 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 CT45A6P0DMU7 189 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 CT45A5P0DMU8 189 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 CT45A7P0DMV0 189 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 FSTP19883 344 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 MECP2P51608 486 aaKnown RBP7.08□□□□□ -1.28
VCL-204ENST00000472585 LINC00205P59089 165 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 SSBP2P81877 361 aaPredicted RBP7.08□□□□□ -1.28
VCL-204ENST00000472585 KLF5Q13887 457 aaPredicted RBP7.08□□□□□ -1.28
VCL-204ENST00000472585 MPV17LQ2QL34 196 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 ZIK1Q3SY52 487 aaPredicted RBP7.08□□□□□ -1.28
VCL-204ENST00000472585 DNAL1Q4LDG9 190 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 DDI2Q5TDH0 399 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 ZNF660Q6AZW8 331 aaPredicted RBP7.08□□□□□ -1.28
VCL-204ENST00000472585 CD200R1LQ6Q8B3 271 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 GLDNQ6ZMI3 551 aaPredicted RBP7.08□□□□□ -1.28
VCL-204ENST00000472585 RPP25LQ8N5L8 163 aaKnown RBP7.08□□□□□ -1.28
VCL-204ENST00000472585 OR52I1Q8NGK6 324 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 MRPL30Q8TCC3 161 aaKnown RBP7.08□□□□□ -1.28
VCL-204ENST00000472585 NEK7Q8TDX7 302 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 TMEM106AQ96A25 262 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 FLYWCH2Q96CP2 140 aaKnown RBP7.08□□□□□ -1.28
VCL-204ENST00000472585 PARP12Q9H0J9 701 aaKnown RBP7.08□□□□□ -1.28
VCL-204ENST00000472585 IFI27L2Q9H2X8 130 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 MBNL3Q9NUK0 354 aaKnown RBP7.08□□□□□ -1.28
VCL-204ENST00000472585 ETAA1Q9NY74 926 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 CNOT2Q9NZN8 540 aaKnown RBP7.08□□□□□ -1.28
VCL-204ENST00000472585 ENOPH1Q9UHY7 261 aa7.08□□□□□ -1.28
VCL-204ENST00000472585 SAA2-SAA4A0A096LPE2 208 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 UBE2QL1A1L167 161 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 CXorf65A6NEN9 183 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 H0Y980 276 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 RRHO14718 337 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 ARPC1BO15143 372 aaKnown RBP7.07□□□□□ -1.28
VCL-204ENST00000472585 MAGEB3O15480 346 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 EIF4EBP3O60516 100 aaPredicted RBP7.07□□□□□ -1.28
VCL-204ENST00000472585 RBMXL2O75526 392 aaKnown RBP7.07□□□□□ -1.28
VCL-204ENST00000472585 FADS2O95864 444 aaKnown RBP7.07□□□□□ -1.28
VCL-204ENST00000472585 LALBAP00709 142 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 CSTBP04080 98 aaKnown RBP7.07□□□□□ -1.28
VCL-204ENST00000472585 CSN3P07498 182 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 SAA2P0DJI9 122 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms