RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 FAM209BQ5JX69 171 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ALKBH7Q9BT30 221 aaPredicted RBP11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 GPR35Q9HC97 309 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 WDR81Q562E7 1941 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 TRAV1-2A0A0B4J238 106 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 A0A1W2PS18 150 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 DIRC3C9JPN6 131 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 SPICQ8N5J4 248 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 A0A1W2PRX2 142 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 FCGR3AP08637 254 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 Q6ZNB5 142 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 OR4A5Q8NH83 315 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 SLC35B3Q9H1N7 401 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 IGHV5-10-1A0A0J9YXX1 117 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ADAP1O75689 374 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 FTH1P19P0C7X4 201 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 PMELP40967 661 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 RELQ04864 619 aaPredicted RBP11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 CFAP161Q6P656 301 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 Q6ZNX1 250 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 GBGT1Q8N5D6 347 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 TMEM191AQ9H0A3 160 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 J3QR06 171 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 CLDN14O95500 239 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 FGF11Q92914 225 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 DUSP21Q9H596 190 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 HSF4Q9ULV5 492 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 SMPD2O60906 423 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 TMEM78Q5T7P6 136 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 C1QL3Q5VWW1 255 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 SLC25A42Q86VD7 318 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 MUC20Q8N307 709 aaPredicted RBP11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 LINC01555Q8NAE3 123 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 OR10G8Q8NGN5 311 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ADTRPQ96IZ2 230 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 PIMREGQ9BSJ6 248 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 TMEM167BQ9NRX6 74 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ISLRO14498 428 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 KIF13BQ9NQT8 1826 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 LRRC37A3O60309 1634 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 HMX2A2RU54 273 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 CRPP02741 224 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 MGAT2Q10469 447 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 RPS4Y2Q8TD47 263 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 CCL13Q99616 98 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 MMP26Q9NRE1 261 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 A0A0B4J2E0 115 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 A0A1B0GX12 115 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 IGLV3-27P01718 113 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 GAPTQ8N292 157 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 OR2Y1Q8NGV0 311 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ISOC2Q96AB3 205 aa11.6□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 SRSF10O75494 262 aaKnown RBP11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 SPNP16150 400 aa11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 FHL5Q5TD97 284 aa11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 SMIM4Q8WVI0 70 aa11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 SOCS1O15524 211 aa11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 IER3P46695 156 aa11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ZFP36L2P47974 494 aaKnown RBP11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 TOGARAM1Q9Y4F4 1720 aa11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 RBMY1BA6NDE4 496 aaKnown RBP11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 RBMY1EA6NEQ0 496 aaKnown RBP11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 CA2P00918 260 aa11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 GHRHP01286 108 aa11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 RBMY1DP0C7P1 496 aaKnown RBP11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 RBMY1A1P0DJD3 496 aaKnown RBP11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 RBMY1CP0DJD4 496 aa11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ARF6P62330 175 aa11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 COL10A1Q03692 680 aa11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 OR2T10Q8NGZ9 312 aa11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ZNF707Q96C28 371 aaPredicted RBP11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 PHYHIPLQ96FC7 376 aa11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ZNF275Q9NSD4 429 aaPredicted RBP11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 OR2W1Q9Y3N9 320 aa11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 STPG1Q5TH74 334 aa11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 JKAMPQ9P055 326 aa11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 FAM89BQ8N5H3 189 aa11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 PIPOXQ9P0Z9 390 aa11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 FAM106CPP0CH98 169 aa11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 C10orf128Q5T292 105 aa11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 JMJD6Q6NYC1 403 aaPredicted RBP11.59□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 CLDN34H7C241 214 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 CTAG2O75638 210 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 GLDNQ6ZMI3 551 aaPredicted RBP11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 ZNF714Q96N38 554 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 SLC6A13Q9NSD5 602 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 CYB5R1Q9UHQ9 305 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 LAMB1P07942 1786 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 IGHV3-48P01763 117 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 SSTR5P35346 364 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 TDGF1P3P51864 188 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 LRRC75BQ2VPJ9 315 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PMS2CLQ68D20 193 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PPIAL4EA0A075B759 164 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PPIAL4DF5H284 164 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 GFRA3O60609 400 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PPIAL4FP0DN26 164 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 TMPRSS3P57727 454 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PSG6Q00889 435 aa11.58□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 AANATQ16613 207 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms