RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 ZNF16P17020 682 aaPredicted RBP8.01□□□□□ -1.13
SF3A1-207ENST00000471342 PAX6P26367 422 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 FCGR2CP31995 323 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 KIR2DS4P43632 304 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 MECP2P51608 486 aaKnown RBP8.01□□□□□ -1.13
SF3A1-207ENST00000471342 CCR6P51684 374 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 ACTBP60709 375 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 ACTG1P63261 375 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 KIR2DS1Q14954 304 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 LTC4SQ16873 150 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 Q3ZCU0 254 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 ZNF626Q68DY1 528 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 TRAT1Q6PIZ9 186 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 LHFPL4Q7Z7J7 247 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 DUSP18Q8NEJ0 188 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 SETD6Q8TBK2 473 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 PIFOQ8TCI5 191 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 DEDD2Q8WXF8 326 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 MOB3AQ96BX8 217 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 GPHA2Q96T91 129 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 SUCNR1Q9BXA5 334 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 GSX1Q9H4S2 264 aaPredicted RBP8.01□□□□□ -1.13
SF3A1-207ENST00000471342 C5orf66Q9H5L9 145 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 CHMP1AQ9HD42 196 aaPredicted RBP8.01□□□□□ -1.13
SF3A1-207ENST00000471342 PALMDQ9NP74 551 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 OR2S2Q9NQN1 319 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 MGAT4AQ9UM21 535 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 GPR132Q9UNW8 380 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 FLVCR2Q9UPI3 526 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 DOCK11Q5JSL3 2073 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 SMAD7O15105 426 aaKnown RBP8□□□□□ -1.13
SF3A1-207ENST00000471342 BET1O15155 118 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 ST8SIA5O15466 376 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 LYRM1O43325 122 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 LY6G6DO95868 133 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 PPYP01298 95 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 CSF1P09603 554 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 CEACAM6P40199 344 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 GZMKP49863 264 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 UCP3P55916 312 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 RPL30P62888 115 aaKnown RBP8□□□□□ -1.13
SF3A1-207ENST00000471342 SUPT4H1P63272 117 aaKnown RBP8□□□□□ -1.13
SF3A1-207ENST00000471342 OXA1LQ15070 435 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 NRARPQ7Z6K4 114 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 ABHD12Q8N2K0 398 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 PRR18Q8N4B5 295 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 TOMM5Q8N4H5 51 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 ARRDC1Q8N5I2 433 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 BEND2Q8NDZ0 799 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 TERB2Q8NHR7 220 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 DDB2Q92466 427 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 CREB3L1Q96BA8 519 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 C18orf12Q96KH6 178 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 ZNF2Q9BSG1 426 aaPredicted RBP8□□□□□ -1.13
SF3A1-207ENST00000471342 RSRP1Q9BUV0 290 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 METTL8Q9H825 291 aaKnown RBP8□□□□□ -1.13
SF3A1-207ENST00000471342 NECAP2Q9NVZ3 263 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 TAS2R8Q9NYW2 309 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 EHFQ9NZC4 300 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 SLC23A1Q9UHI7 598 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 OR2W1Q9Y3N9 320 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 FN1P02751 2386 aaKnown RBP8□□□□□ -1.13
SF3A1-207ENST00000471342 MXRA5Q9NR99 2828 aa8□□□□□ -1.13
SF3A1-207ENST00000471342 TLN2Q9Y4G6 2542 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 LINC00854A0A1B0GVQ3 168 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 NDUFB6O95139 128 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 TGFAP01135 160 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 CTXN2P0C2S0 81 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 VSIG10L2P0DP72 767 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 ZBTB25P24278 435 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 OR3A3P47888 321 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 TAS2R46P59540 309 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 DHODHQ02127 395 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 HABP2Q14520 560 aaPredicted RBP7.99□□□□□ -1.13
SF3A1-207ENST00000471342 MRGPRG-AS1Q2M3A8 158 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 HLA-DRB5Q30154 266 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 TMEM30BQ3MIR4 351 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 RUSC1-AS1Q66K80 236 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 CYB5R2Q6BCY4 276 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 ZNF818PQ6ZRF7 136 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 ZNF833PQ6ZTB9 187 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 BCL6BQ8N143 479 aaPredicted RBP7.99□□□□□ -1.13
SF3A1-207ENST00000471342 DRAM1Q8N682 238 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 ADAD2Q8NCV1 583 aaKnown RBP7.99□□□□□ -1.13
SF3A1-207ENST00000471342 OR5H2Q8NGV7 314 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 IL1F10Q8WWZ1 152 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 CFHR4Q92496 578 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 ABHD14BQ96IU4 210 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 ZNF48Q96MX3 618 aaPredicted RBP7.99□□□□□ -1.13
SF3A1-207ENST00000471342 GAL3ST2Q9H3Q3 398 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 PRDM13Q9H4Q3 707 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 IFT46Q9NQC8 304 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 CCL28Q9NRJ3 127 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 SDHAF2Q9NX18 166 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 ONECUT1Q9UBC0 465 aa7.99□□□□□ -1.13
SF3A1-207ENST00000471342 A0A1W2PPI3 338 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 FAM90A9PA6NNJ1 464 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 LINC00473A8K010 186 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 BUB1B-PAK6H3BSN5 160 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 SPINT2O43291 252 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms