RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 CLN8Q9UBY8 286 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 KCNS2Q9ULS6 477 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 LAMP3Q9UQV4 416 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 RBM7Q9Y580 266 aaKnown RBP7.77□□□□□ -1.17
VPS52-216ENST00000471309 TMEM56-RWDD3S4R434 201 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 DSCAMO60469 2012 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 DIDO1Q9BTC0 2240 aaKnown RBP7.76□□□□□ -1.17
VPS52-216ENST00000471309 DUXBA0A1W2PPF3 345 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 C5orf51A6NDU8 294 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 RNF212BA8MTL3 300 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 FAM25EA8MYX2 175 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 LYNX1G3V0Z9 82 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 DVL1O14640 695 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 ITGB1BP1O14713 200 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 PGLYRP1O75594 196 aaPredicted RBP7.76□□□□□ -1.17
VPS52-216ENST00000471309 FCN3O75636 299 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 SNAPC5O75971 98 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 IFNA21P01568 189 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 LYNX1P0DP58 116 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 DAOP14920 347 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 F2RP25116 425 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 UCP1P25874 307 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 LOXL3P58215 753 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 SP6Q3SY56 376 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 TMEM155Q4W5P6 130 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 Q5BKY6 102 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 LYPD2Q6UXB3 125 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 FGFRL1Q8N441 504 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 DRAM1Q8N682 238 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 RFESDQ8TAC1 157 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 IL22RA2Q969J5 263 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 TIMD4Q96H15 378 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 C2orf50Q96LR7 162 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 OR2D2Q9H210 308 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 GAL3ST2Q9H3Q3 398 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 METTL8Q9H825 291 aaKnown RBP7.76□□□□□ -1.17
VPS52-216ENST00000471309 CHODLQ9H9P2 273 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 C19orf12Q9NSK7 152 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 LIN7CQ9NUP9 197 aaKnown RBP7.76□□□□□ -1.17
VPS52-216ENST00000471309 COMMD9Q9P000 198 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 GNG12Q9UBI6 72 aa7.76□□□□□ -1.17
VPS52-216ENST00000471309 DSCAML1Q8TD84 2053 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 TRBV23-1A0A0A0MS06 115 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 TRAV14DV4A0A0A6YYC5 116 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 IGHV3-43A0A0B4J1X8 118 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 C13orf42A0A1B0GVH6 325 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 MEX3AA1L020 520 aaKnown RBP7.75□□□□□ -1.17
VPS52-216ENST00000471309 HMSDA8MTL9 139 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 TNFSF12O43508 249 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 CDS2O95674 445 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 IGHV3-43DP0DP04 118 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 RPL31P62899 125 aaKnown RBP7.75□□□□□ -1.17
VPS52-216ENST00000471309 EIF4EBP1Q13541 118 aaPredicted RBP7.75□□□□□ -1.17
VPS52-216ENST00000471309 ZNF273Q14593 569 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 MORN2Q502X0 79 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 TMEM268Q5VZI3 342 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 GGNBP1Q5YKI7 109 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 LAMTOR1Q6IAA8 161 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 OR52M1Q8NGK5 317 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 GRPEL2Q8TAA5 225 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 LHFPL5Q8TAF8 219 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 RAB1CQ92928 201 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 SEC22AQ96IW7 307 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 ZNF714Q96N38 554 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 AGMATQ9BSE5 352 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 GFOD1Q9NXC2 390 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 IDI2-AS1Q9NZ38 188 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 TMED3Q9Y3Q3 217 aa7.75□□□□□ -1.17
VPS52-216ENST00000471309 MPTX1A8MV57 137 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 OVOL3O00110 214 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 ST8SIA5O15466 376 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 KALRNO60229 2985 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 F12P00748 615 aaPredicted RBP7.74□□□□□ -1.17
VPS52-216ENST00000471309 HOXB5P09067 269 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 SLC25A4P12235 298 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 CDKN1AP38936 164 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 RAB7AP51149 207 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 EFNA4P52798 201 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 SRSF1Q07955 248 aaKnown RBP eCLIP7.74□□□□□ -1.17
VPS52-216ENST00000471309 CATR1Q13166 79 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 IL15RAQ13261 267 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 LTC4SQ16873 150 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 IAH1Q2TAA2 248 aaPredicted RBP7.74□□□□□ -1.17
VPS52-216ENST00000471309 Q3ZCU0 254 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 AVPI1Q5T686 147 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 TMEM200BQ69YZ2 307 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 FAM53AQ6NSI3 398 aaPredicted RBP7.74□□□□□ -1.17
VPS52-216ENST00000471309 HEPN1Q6WQI6 88 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 LYZL2Q7Z4W2 148 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 ZNF695Q8IW36 515 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 SELENOHQ8IZQ5 122 aaKnown RBP7.74□□□□□ -1.17
VPS52-216ENST00000471309 SLC35G3Q8N808 338 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 OR51H1Q8NH63 302 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 PPP1R1CQ8WVI7 109 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 IGFBPL1Q8WX77 278 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 H1FXQ92522 213 aaKnown RBP7.74□□□□□ -1.17
VPS52-216ENST00000471309 C5orf30Q96GV9 206 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 OR10C1Q96KK4 312 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 GPHA2Q96T91 129 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 ABHD14AQ9BUJ0 271 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms