RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 CDAP32320 146 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 TPPP2P59282 170 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 FAM3AP98173 230 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 WDR82Q6UXN9 313 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.59□□□□□ -1.03
NUP50-214ENST00000469163 TMEM123Q8N131 208 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 ZPLD1Q8TCW7 415 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 FGF11Q92914 225 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 C5orf30Q96GV9 206 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 LIN37Q96GY3 246 aaPredicted RBP8.59□□□□□ -1.03
NUP50-214ENST00000469163 OR10C1Q96KK4 312 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 MAP1LC3BQ9GZQ8 125 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 CALHM2Q9HA72 323 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 A0A1B0GTH9 108 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 NUPR1O60356 82 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 GPR137BO60478 399 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 RCBTB2O95199 551 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 THY1P04216 161 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 CCL2P13500 99 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 RPL24P83731 157 aaKnown RBP8.59□□□□□ -1.03
NUP50-214ENST00000469163 DMKNQ6E0U4 476 aaPredicted RBP8.59□□□□□ -1.03
NUP50-214ENST00000469163 OPN5Q6U736 354 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 Q6ZWC4 215 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 DPY19L4Q7Z388 723 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 TUSC5Q8IXB3 177 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 ADAD2Q8NCV1 583 aaKnown RBP8.59□□□□□ -1.03
NUP50-214ENST00000469163 ZNF519Q8TB69 540 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 OR2V2Q96R30 315 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 SCNM1Q9BWG6 230 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 WNK2Q9Y3S1 2297 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 B4DEV8 164 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 CELA3AP09093 270 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 GNB3P16520 340 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 ADIRFQ15847 76 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 OR51D1Q8NGF3 324 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 SNIP1Q8TAD8 396 aaKnown RBP8.59□□□□□ -1.03
NUP50-214ENST00000469163 ZNF524Q96C55 264 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 ATP5SQ99766 215 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 SH3BGRL3Q9H299 93 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 LRRK2Q5S007 2527 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 DIRC3C9JPN6 131 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 DBHP09172 617 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 IGLC2P0DOY2 106 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 IGLC3P0DOY3 106 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 TSPOP30536 169 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 ZNF136P52737 540 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 FUT7Q11130 342 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 ZNF266Q14584 549 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 LTC4SQ16873 150 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.58□□□□□ -1.04
NUP50-214ENST00000469163 CALHM1Q8IU99 346 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 SLAMF6Q96DU3 332 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 UCN2Q96RP3 112 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 CTDSP1Q9GZU7 261 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 PARLQ9H300 379 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 KCNK15Q9H427 330 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 LSM5Q9Y4Y9 91 aaKnown RBP8.58□□□□□ -1.04
NUP50-214ENST00000469163 CACNA1DQ01668 2161 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 A0A096LPE4 126 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 A0A1W2PPZ6 126 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 GAGE10A6NGK3 116 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 CXCL13O43927 109 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 CD99P14209 185 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 ZNF43P17038 809 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 OTX1P32242 354 aaPredicted RBP8.58□□□□□ -1.04
NUP50-214ENST00000469163 PGGHGQ32M88 737 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 ZNF684Q5T5D7 378 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 CCDC144NLQ6NUI1 221 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 SLC25A42Q86VD7 318 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 CHST4Q8NCG5 386 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 AK3Q9UIJ7 227 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 IGHV1-69-2A0A0G2JMI3 117 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 A4D1N5 150 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 HSPB2A8KAH6 182 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 PRR33A8MZF0 331 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 RHBDL1O75783 438 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 ZNF205O95201 554 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 WNT11O96014 354 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 RFPL3SP0C7P2 107 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 SLC6A6P31641 620 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 RND2P52198 227 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 EFNB2P52799 333 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 RPL18Q07020 188 aaKnown RBP8.58□□□□□ -1.04
NUP50-214ENST00000469163 SPOCK1Q08629 439 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 HSPB2Q16082 182 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 MRGPREQ86SM8 312 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 C17orf82Q86X59 251 aaPredicted RBP8.58□□□□□ -1.04
NUP50-214ENST00000469163 ATOH7Q8N100 152 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 KLHDC1Q8N7A1 406 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 ZFP62Q8NB50 900 aaPredicted RBP8.58□□□□□ -1.04
NUP50-214ENST00000469163 SUMF1Q8NBK3 374 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 GFI1Q99684 422 aa8.58□□□□□ -1.04
NUP50-214ENST00000469163 FREM1Q5H8C1 2179 aa8.57□□□□□ -1.04
NUP50-214ENST00000469163 GRIFINA4D1Z8 144 aa8.57□□□□□ -1.04
NUP50-214ENST00000469163 F5H5K5 113 aa8.57□□□□□ -1.04
NUP50-214ENST00000469163 NDUFB2O95178 105 aa8.57□□□□□ -1.04
NUP50-214ENST00000469163 PNMTP11086 282 aa8.57□□□□□ -1.04
NUP50-214ENST00000469163 SRPXP78539 464 aa8.57□□□□□ -1.04
NUP50-214ENST00000469163 FAM71F2Q6NXP2 309 aa8.57□□□□□ -1.04
NUP50-214ENST00000469163 PLPP7Q8NBV4 271 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms