RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 MTCH1Q9NZJ7 389 aa11.85□□□□□ -0.51
COL27A1-203ENST00000468565 UBQLN2Q9UHD9 624 aa11.85□□□□□ -0.51
COL27A1-203ENST00000468565 POMT1Q9Y6A1 747 aa11.85□□□□□ -0.51
COL27A1-203ENST00000468565 HMSDA8MTL9 139 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 RNASEK-C17orf49H0YIS7 233 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 SSX5O60225 188 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 SIX6O95475 246 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 PTGFRP43088 359 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 CBX5P45973 191 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 H2BFSP57053 126 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 UBE2MP61081 183 aaKnown RBP11.84□□□□□ -0.51
COL27A1-203ENST00000468565 C2orf68Q2NKX9 166 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 NCR3LG1Q68D85 454 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 LHFPL2Q6ZUX7 228 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 Q8IYB0 196 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 OR8H3Q8N146 312 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 GVQW1Q8N7I0 195 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 TNFRSF14Q92956 283 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 S100A13Q99584 98 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 KCNK7Q9Y2U2 307 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 A0A0A6YYD4 124 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 FAM25EA8MYX2 175 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 SOCS1O15524 211 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 MPC2O95563 127 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 CD34P28906 385 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 HRH1P35367 487 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 CEBPDP49716 269 aaPredicted RBP11.84□□□□□ -0.51
COL27A1-203ENST00000468565 SLC22A6Q4U2R8 563 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 OR52W1Q6IF63 320 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 SLC25A26Q70HW3 274 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 SLC25A42Q86VD7 318 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 LDLRAD3Q86YD5 345 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 MKXQ8IYA7 352 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 FAM185AQ8N0U4 392 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 BATF2Q8N1L9 274 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 C3orf56Q8N813 242 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 SLAMF9Q96A28 289 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 SEBOXQ9HB31 216 aaPredicted RBP11.84□□□□□ -0.51
COL27A1-203ENST00000468565 OR14J1Q9UGF5 321 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 ANAPC10Q9UM13 185 aa11.84□□□□□ -0.51
COL27A1-203ENST00000468565 A0A0U1RQK1 487 aa11.83□□□□□ -0.52
COL27A1-203ENST00000468565 A0A1W2PPH5 198 aa11.83□□□□□ -0.52
COL27A1-203ENST00000468565 MCRIP1C9JLW8 97 aa11.83□□□□□ -0.52
COL27A1-203ENST00000468565 TK1P04183 234 aa11.83□□□□□ -0.52
COL27A1-203ENST00000468565 CXCL2P19875 107 aa11.83□□□□□ -0.52
COL27A1-203ENST00000468565 RPS27AP62979 156 aaKnown RBP11.83□□□□□ -0.52
COL27A1-203ENST00000468565 EXOSC2Q13868 293 aaKnown RBP11.83□□□□□ -0.52
COL27A1-203ENST00000468565 ARL6IP1Q15041 203 aa11.83□□□□□ -0.52
COL27A1-203ENST00000468565 LIN54Q6MZP7 749 aa11.83□□□□□ -0.52
COL27A1-203ENST00000468565 LPCAT3Q6P1A2 487 aa11.83□□□□□ -0.52
COL27A1-203ENST00000468565 PDZD9Q8IXQ8 264 aa11.83□□□□□ -0.52
COL27A1-203ENST00000468565 OR51T1Q8NGJ9 327 aa11.83□□□□□ -0.52
COL27A1-203ENST00000468565 OR5D13Q8NGL4 314 aa11.83□□□□□ -0.52
COL27A1-203ENST00000468565 OR4K15Q8NH41 348 aa11.83□□□□□ -0.52
COL27A1-203ENST00000468565 SSMEM1Q8WWF3 244 aa11.83□□□□□ -0.52
COL27A1-203ENST00000468565 CPNE2Q96FN4 548 aaPredicted RBP11.83□□□□□ -0.52
COL27A1-203ENST00000468565 C19orf12Q9NSK7 152 aa11.83□□□□□ -0.52
COL27A1-203ENST00000468565 VSIG4Q9Y279 399 aa11.83□□□□□ -0.52
COL27A1-203ENST00000468565 LINC00862A6NCI5 91 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 F8VVB4 439 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 F8VWA3 439 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 K7N7A8 449 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 UBE2E1P51965 193 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 MTCP1P56278 107 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 RAB14P61106 215 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 B2MP61769 119 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 RPL31P62899 125 aaKnown RBP11.82□□□□□ -0.52
COL27A1-203ENST00000468565 DHRS2Q13268 280 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 ARFRP1Q13795 201 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 PLAC9Q5JTB6 97 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 LYG2Q86SG7 212 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 FAM89BQ8N5H3 189 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 CITED4Q96RK1 184 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.82□□□□□ -0.526e-16■■□□□ 11.9
COL27A1-203ENST00000468565 FXYD6-FXYD2A0A087WZ82 144 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 MFNGO00587 321 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 NPFFO15130 113 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 HLA-AP01891 365 aaKnown RBP11.82□□□□□ -0.52
COL27A1-203ENST00000468565 PMP2P02689 132 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 TAS2R31P59538 309 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 COL10A1Q03692 680 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 CLLU1Q5K131 121 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 FIP1L1Q6UN15 594 aaKnown RBP11.82□□□□□ -0.52
COL27A1-203ENST00000468565 LHFPL5Q8TAF8 219 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 EMG1Q92979 244 aaKnown RBP11.82□□□□□ -0.52
COL27A1-203ENST00000468565 WDR89Q96FK6 387 aaPredicted RBP11.82□□□□□ -0.52
COL27A1-203ENST00000468565 FXYD6Q9H0Q3 95 aa11.82□□□□□ -0.52
COL27A1-203ENST00000468565 A0A1W2PP11 408 aa11.81□□□□□ -0.52
COL27A1-203ENST00000468565 ARPC5O15511 151 aa11.81□□□□□ -0.52
COL27A1-203ENST00000468565 ZNF737O75373 536 aa11.81□□□□□ -0.52
COL27A1-203ENST00000468565 FBP1P09467 338 aa11.81□□□□□ -0.52
COL27A1-203ENST00000468565 MGMTP16455 207 aa11.81□□□□□ -0.52
COL27A1-203ENST00000468565 ZBTB25P24278 435 aa11.81□□□□□ -0.52
COL27A1-203ENST00000468565 S100A11P31949 105 aa11.81□□□□□ -0.52
COL27A1-203ENST00000468565 TMEM50BP56557 158 aa11.81□□□□□ -0.52
COL27A1-203ENST00000468565 RPL15P61313 204 aaKnown RBP11.81□□□□□ -0.52
COL27A1-203ENST00000468565 FGL1Q08830 312 aa11.81□□□□□ -0.52
COL27A1-203ENST00000468565 KLRD1Q13241 179 aa11.81□□□□□ -0.52
COL27A1-203ENST00000468565 VAX1Q5SQQ9 334 aa11.81□□□□□ -0.52
COL27A1-203ENST00000468565 TMEM200BQ69YZ2 307 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms