RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 MRPL30Q8TCC3 161 aaKnown RBP3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 MRGPRDQ8TDS7 321 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 IL1F10Q8WWZ1 152 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 ARL11Q969Q4 196 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 CREB3L1Q96BA8 519 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 SDSLQ96GA7 329 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 OR8B2Q96RD0 313 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 NUDT16L1Q9BRJ7 211 aaKnown RBP3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 CCDC32Q9BV29 185 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 BPESC1Q9GZL8 116 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 SCPEP1Q9HB40 452 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNF286AQ9HBT8 521 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 LPAR2Q9HBW0 351 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 HRASLSQ9HDD0 168 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 KCNIP1Q9NZI2 227 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 RCC2Q9P258 522 aaKnown RBP3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 CTSZQ9UBR2 303 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 MTFP1Q9UDX5 166 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 MIOXQ9UGB7 285 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 MYO18BQ8IUG5 2567 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 PKDREJQ9NTG1 2253 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 PLCE1Q9P212 2302 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 SPTAN1Q13813 2472 aaKnown RBP3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 ARFGEF3Q5TH69 2177 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 ANKHD1Q8IWZ3 2542 aaKnown RBP3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 USP9XQ93008 2570 aaPredicted RBP3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 LOC105371242A0A075B767 164 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 IGHV4-30-2A0A087WSY4 118 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 hADV38S2A0JD32 116 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 ODAMA1E959 279 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 FUOMA2VDF0 154 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 FAM172BPA6NC97 362 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 CXorf65A6NEN9 183 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 DNAJC9-AS1A6NH13 148 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNF736B4DX44 427 aaPredicted RBP3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 TRDCB7Z8K6 153 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 DISC1C4P0D8 188 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 RHODO00212 210 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 TNFRSF13BO14836 293 aaPredicted RBP3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 PLA2G10O15496 165 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 FABP7O15540 132 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 HSPA12AO43301 675 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 CA11O75493 328 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 TPPPO94811 219 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 IGHV3-7P01780 117 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 GLAP06280 429 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 FCGR3AP08637 254 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 WNT2P09544 360 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 AKAIN1P0CW23 69 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 SPNP16150 400 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 OMGP23515 440 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 NFYBP25208 207 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 IL2RGP31785 369 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 RCVRNP35243 200 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 CCR6P51684 374 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 P2RX3P56373 397 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 TAS2R19P59542 299 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 DEFA1P59665 94 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 DEFA3P59666 94 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 AP3S2P59780 193 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 GNB2P62879 340 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 RPL31P62899 125 aaKnown RBP3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 LCN2P80188 198 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 PRB3Q04118 309 aaPredicted RBP3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 KLF9Q13886 244 aaPredicted RBP3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 MIDNQ504T8 468 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 IGSF11Q5DX21 431 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 RSBN1Q5VWQ0 802 aaPredicted RBP3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 WDR25Q64LD2 544 aaPredicted RBP3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 SLC35E4Q6ICL7 350 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 FAM53AQ6NSI3 398 aaPredicted RBP3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 STEAP1BQ6NZ63 245 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 MZT2BQ6NZ67 158 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNF497Q6ZNH5 498 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 GLCCI1Q86VQ1 547 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNF565Q8N9K5 539 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 TMEM229BQ8NBD8 167 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 MAPK1IP1LQ8NDC0 245 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 OR4D10Q8NGI6 311 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 OR10V1Q8NGI7 309 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 OR13A1Q8NGR1 328 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 OR56B4Q8NH76 319 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 OR1L1Q8NH94 360 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 CLDND2Q8NHS1 167 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 C10orf105Q8TEF2 133 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 C2CD4CQ8TF44 421 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 SMIM4Q8WVI0 70 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 RPL36ALQ969Q0 106 aaKnown RBP3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 COQ2Q96H96 371 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 LURAP1Q96LR2 239 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 GINS4Q9BRT9 223 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 MMP28Q9H239 520 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 RIMS4Q9H426 269 aaPredicted RBP3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 PATZ1Q9HBE1 687 aaKnown RBP3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 TAF9BQ9HBM6 251 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 Q9N2K0 584 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 C12orf4Q9NQ89 552 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 C19orf12Q9NSK7 152 aa3.35□□□□□ -1.87
TMEM39A-204ENST00000468545 BEX4Q9NWD9 120 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms