RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 PVALBP20472 110 aaPredicted RBP8.33□□□□□ -1.08
PTPRD-207ENST00000463477 PPP1CBP62140 327 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 DEFA5Q01523 94 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 ZNF146Q15072 292 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 SPIN3Q5JUX0 258 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 OR2T2Q6IF00 324 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 ALKBH2Q6NS38 261 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 TMEM108Q6UXF1 575 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 ZNF818PQ6ZRF7 136 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 ZNF695Q8IW36 515 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.33□□□□□ -1.08
PTPRD-207ENST00000463477 NEK7Q8TDX7 302 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 SECTM1Q8WVN6 248 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 ERGIC1Q969X5 290 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 NARS2Q96I59 477 aaKnown RBP8.33□□□□□ -1.08
PTPRD-207ENST00000463477 KIRREL1Q96J84 757 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 TSNAXQ99598 290 aaKnown RBP8.33□□□□□ -1.08
PTPRD-207ENST00000463477 STRAPQ9Y3F4 350 aaKnown RBP8.33□□□□□ -1.08
PTPRD-207ENST00000463477 OR2W1Q9Y3N9 320 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 AKAP9Q99996 3911 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 MAP1AP78559 2803 aaPredicted RBP8.32□□□□□ -1.08
PTPRD-207ENST00000463477 IGKV1D-13A0A0B4J2D9 117 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.32□□□□□ -1.08
PTPRD-207ENST00000463477 TSPAN4O14817 238 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 SNAPINO95295 136 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 PLAUP00749 431 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 CD3EP07766 207 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 PGA5P0DJD9 388 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 IGKV1-13P0DP09 117 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 CBR1P16152 277 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 CA6P23280 308 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 PTAFRP25105 342 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 HOXC12P31275 282 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 NKX2-1P43699 371 aaPredicted RBP8.32□□□□□ -1.08
PTPRD-207ENST00000463477 UBE2NP61088 152 aaKnown RBP8.32□□□□□ -1.08
PTPRD-207ENST00000463477 ID3Q02535 119 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 BSPH1Q075Z2 132 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 TESK1Q15569 626 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 ZNF497Q6ZNH5 498 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 C1orf174Q8IYL3 243 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 OR2C3Q8N628 320 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 FAM169BQ8N8A8 192 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 LILRB1Q8NHL6 650 aaPredicted RBP8.32□□□□□ -1.08
PTPRD-207ENST00000463477 AKR1E2Q96JD6 320 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 FOXC2Q99958 501 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 NRIP2Q9BQI9 281 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 SLC25A31Q9H0C2 315 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 PLA2G2EQ9NZK7 142 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 PURGQ9UJV8 347 aaKnown RBP8.32□□□□□ -1.08
PTPRD-207ENST00000463477 RNF115Q9Y4L5 304 aa8.32□□□□□ -1.08
PTPRD-207ENST00000463477 PRRC2AP48634 2157 aaKnown RBP8.31□□□□□ -1.08
PTPRD-207ENST00000463477 A0A1W2PR80 420 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 F8W036 122 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 PITX3O75364 302 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 IGKV3-15P01624 115 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 F2RP25116 425 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 LMO1P25800 156 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 CD40P25942 277 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 DVL1P1P54792 670 aaPredicted RBP8.31□□□□□ -1.08
PTPRD-207ENST00000463477 BAXQ07812 192 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 ZNF266Q14584 549 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 OR8G1Q15617 311 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 SWI5Q1ZZU3 235 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 DHRS7BQ6IAN0 325 aaPredicted RBP8.31□□□□□ -1.08
PTPRD-207ENST00000463477 C20orf204Q6ZNR8 217 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 Q6ZRG5 221 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 WDR86Q86TI4 376 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 PUSL1Q8N0Z8 303 aaKnown RBP8.31□□□□□ -1.08
PTPRD-207ENST00000463477 BATF2Q8N1L9 274 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 SCCPDHQ8NBX0 429 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 CLRN3Q8NCR9 226 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 OR10J5Q8NHC4 309 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 CXXC4Q9H2H0 198 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 HRH4Q9H3N8 390 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 HES4Q9HCC6 221 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 CCL28Q9NRJ3 127 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 LYRM2Q9NU23 88 aaPredicted RBP8.31□□□□□ -1.08
PTPRD-207ENST00000463477 MBNL3Q9NUK0 354 aaKnown RBP8.31□□□□□ -1.08
PTPRD-207ENST00000463477 WIPI2Q9Y4P8 454 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 PLCE1Q9P212 2302 aa8.31□□□□□ -1.08
PTPRD-207ENST00000463477 A0A1B0GW64 132 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 RNASEK-C17orf49H0YIS7 233 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 SLC33A1O00400 549 aaPredicted RBP8.3□□□□□ -1.08
PTPRD-207ENST00000463477 HS3ST1O14792 307 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 PGLYRP1O75594 196 aaPredicted RBP8.3□□□□□ -1.08
PTPRD-207ENST00000463477 RHBDL1O75783 438 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 CD200P41217 278 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 EWSR1Q01844 656 aaKnown RBP eCLIP8.3□□□□□ -1.08
PTPRD-207ENST00000463477 HMGN3Q15651 99 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 DEFB113Q30KQ7 82 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 C3orf36Q3SXR2 165 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 ZNF672Q499Z4 452 aaPredicted RBP8.3□□□□□ -1.08
PTPRD-207ENST00000463477 SPNS3Q6ZMD2 512 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 OR8G5Q8NG78 346 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 IGFBPL1Q8WX77 278 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 ZNF488Q96MN9 340 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 ADAT1Q9BUB4 502 aaKnown RBP8.3□□□□□ -1.08
PTPRD-207ENST00000463477 OR2J1Q9GZK6 312 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 TOLLIPQ9H0E2 274 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 WFDC1Q9HC57 220 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms