RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 SMIM3Q9BZL3 60 aa4□□□□□ -1.77
VPS72-203ENST00000463470 LIME1Q9H400 295 aa4□□□□□ -1.77
VPS72-203ENST00000463470 NCOR1P1Q9H4R4 102 aa4□□□□□ -1.77
VPS72-203ENST00000463470 C11orf1Q9H5F2 150 aa4□□□□□ -1.77
VPS72-203ENST00000463470 ZDHHC11Q9H8X9 412 aa4□□□□□ -1.77
VPS72-203ENST00000463470 RPS10P5Q9NQ39 176 aa4□□□□□ -1.77
VPS72-203ENST00000463470 CCL28Q9NRJ3 127 aa4□□□□□ -1.77
VPS72-203ENST00000463470 MBNL3Q9NUK0 354 aaKnown RBP4□□□□□ -1.77
VPS72-203ENST00000463470 TMEM242Q9NWH2 141 aa4□□□□□ -1.77
VPS72-203ENST00000463470 PRR13Q9NZ81 148 aa4□□□□□ -1.77
VPS72-203ENST00000463470 TRAPPC2LQ9UL33 140 aa4□□□□□ -1.77
VPS72-203ENST00000463470 FBXO7Q9Y3I1 522 aa4□□□□□ -1.77
VPS72-203ENST00000463470 WIPI2Q9Y4P8 454 aa4□□□□□ -1.77
VPS72-203ENST00000463470 RBM7Q9Y580 266 aaKnown RBP4□□□□□ -1.77
VPS72-203ENST00000463470 SHANK1Q9Y566 2161 aa4□□□□□ -1.77
VPS72-203ENST00000463470 MYO9AB2RTY4 2548 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 CELSR2Q9HCU4 2923 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 MED12Q93074 2177 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 TRAV24A0A0B4J272 114 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 C7orf77A4D0Y5 90 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 FAM24AA6NFZ4 105 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 FAM90A9PA6NNJ1 464 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 COLCA2A8K830 154 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 CYSRT1A8MQ03 144 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 FAM166BA8MTA8 275 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 AHRRA9YTQ3 701 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 AQP7O14520 342 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 TXNL1O43396 289 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 KCNAB3O43448 404 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 SYNGR2O43760 224 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 CHST1O43916 411 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 SSSCA1O60232 199 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 SMPD2O60906 423 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 NXPH2O95156 264 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 F10P00742 488 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 CRYBA1P05813 215 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 ADH4P08319 380 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 SCTP09683 121 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 SMIM6P0DI80 62 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 PGA5P0DJD9 388 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 RCC1P18754 421 aaPredicted RBP3.99□□□□□ -1.77
VPS72-203ENST00000463470 CD33P20138 364 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 ATP6V0CP27449 155 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 IL2RGP31785 369 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 KIR2DS2P43631 304 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 NPBWR1P48145 328 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 ATP5IP56385 69 aaPredicted RBP3.99□□□□□ -1.77
VPS72-203ENST00000463470 TMPRSS3P57727 454 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 CD81P60033 236 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 ERVK11-1P61568 191 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 PPP1CBP62140 327 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 POLR2GP62487 172 aaKnown RBP eCLIP3.99□□□□□ -1.77
VPS72-203ENST00000463470 NHLH2Q02577 135 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 SSX2Q16385 188 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 SMIM21Q3B7S5 101 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 ZNF506Q5JVG8 444 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 Q6P435 159 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 TMEM88Q6PEY1 159 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 ZNF497Q6ZNH5 498 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 TMEM182Q6ZP80 229 aaPredicted RBP3.99□□□□□ -1.77
VPS72-203ENST00000463470 LINC00696Q6ZRV3 163 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 Q6ZT83 130 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 FAM214BQ7L5A3 538 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 ZNF645Q8N7E2 425 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 OR13D1Q8NGV5 346 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 OR11L1Q8NGX0 322 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 TCTEX1D2Q8WW35 142 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 MBD3L1Q8WWY6 194 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 EDARADDQ8WWZ3 215 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 ERGIC1Q969X5 290 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 TVP23CQ96ET8 276 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 C14orf79Q96F83 325 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 LURAP1Q96LR2 239 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 SIGLEC12Q96PQ1 595 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 TAAR6Q96RI8 345 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 CLCC1Q96S66 551 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 HSD17B10Q99714 261 aaKnown RBP3.99□□□□□ -1.77
VPS72-203ENST00000463470 SSX3Q99909 188 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 TXNDC17Q9BRA2 123 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 ZNF251Q9BRH9 671 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 NIPSNAP3BQ9BS92 247 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 CTDSP1Q9GZU7 261 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 CXXC4Q9H2H0 198 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 ZNF552Q9H707 407 aaPredicted RBP3.99□□□□□ -1.77
VPS72-203ENST00000463470 KCNIP2Q9NS61 270 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.99□□□□□ -1.77
VPS72-203ENST00000463470 METTL1Q9UBP6 276 aaKnown RBP3.99□□□□□ -1.77
VPS72-203ENST00000463470 ERRFI1Q9UJM3 462 aaPredicted RBP3.99□□□□□ -1.77
VPS72-203ENST00000463470 FAM96BQ9Y3D0 163 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 DOCK10Q96BY6 2186 aa3.99□□□□□ -1.77
VPS72-203ENST00000463470 AHCTF1Q8WYP5 2266 aa3.98□□□□□ -1.77
VPS72-203ENST00000463470 NOTCH2Q04721 2471 aa3.98□□□□□ -1.77
VPS72-203ENST00000463470 TRBV23-1A0A0A0MS06 115 aa3.98□□□□□ -1.77
VPS72-203ENST00000463470 IGSF23A1L1A6 192 aa3.98□□□□□ -1.77
VPS72-203ENST00000463470 C17orf112F2Z3M2 114 aa3.98□□□□□ -1.77
VPS72-203ENST00000463470 SLC33A1O00400 549 aaPredicted RBP3.98□□□□□ -1.77
VPS72-203ENST00000463470 ITGB1BP1O14713 200 aa3.98□□□□□ -1.77
VPS72-203ENST00000463470 HSD17B6O14756 317 aa3.98□□□□□ -1.77
VPS72-203ENST00000463470 HS3ST1O14792 307 aa3.98□□□□□ -1.77
VPS72-203ENST00000463470 AGPAT2O15120 278 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms