RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ASCL1P50553 236 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 RPL30P62888 115 aaKnown RBP10.67□□□□□ -0.7
VAPB-203ENST00000463370 NHLH2Q02577 135 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 KLRB1Q12918 225 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 FAM90A1Q86YD7 464 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 GPR146Q96CH1 333 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 RNF7Q9UBF6 113 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 CACNA1DQ01668 2161 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 NBASA2RRP1 2371 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 CLEC18AA5D8T8 446 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 K7N7A8 449 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 SSSCA1O60232 199 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 RAMP3O60896 148 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 IGKV1-5P01602 117 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 IGHV3-7P01780 117 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 OMGP23515 440 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 PAX5Q02548 391 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 BTNL3Q6UXE8 466 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 DMRTC2Q8IXT2 367 aaPredicted RBP10.67□□□□□ -0.7
VAPB-203ENST00000463370 FGFRL1Q8N441 504 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 CLEC18CQ8NCF0 446 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 IL22RA2Q969J5 263 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 ABHD14BQ96IU4 210 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 AKR1E2Q96JD6 320 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 SNX22Q96L94 193 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 LURAP1Q96LR2 239 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 MED9Q9NWA0 146 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 PLA2G2EQ9NZK7 142 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 FAM90A27PA6NNH2 459 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 B8ZZF3 427 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 ST8SIA5O15466 376 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 S100GP29377 79 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 CA7P43166 264 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 EDDM3BP56851 147 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 EIF4EBP1Q13541 118 aaPredicted RBP10.66□□□□□ -0.7
VAPB-203ENST00000463370 OR2B11Q5JQS5 317 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 C1QTNF12Q5T7M4 302 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 ZNF645Q8N7E2 425 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 FAM222BQ8WU58 562 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 PLEKHA2Q9HB19 425 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 FAM24AA6NFZ4 105 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 SHISA9B4DS77 424 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 DLL1O00548 723 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 MGST3O14880 152 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 WNT2P09544 360 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 FAM157CP0CG43 387 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 BRWD1-AS2P59051 145 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 STUMQ69YW2 141 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 ODF3L1Q8IXM7 274 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 NINJ1Q92982 152 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 TOLLIPQ9H0E2 274 aa10.66□□□□□ -0.7
VAPB-203ENST00000463370 PIEZO1Q92508 2521 aa10.65□□□□□ -0.7
VAPB-203ENST00000463370 DUXBA0A1W2PPF3 345 aa10.65□□□□□ -0.7
VAPB-203ENST00000463370 C17orf100A8MU93 164 aa10.65□□□□□ -0.7
VAPB-203ENST00000463370 GPR137BO60478 399 aa10.65□□□□□ -0.7
VAPB-203ENST00000463370 GYPAP02724 150 aa10.65□□□□□ -0.7
VAPB-203ENST00000463370 P2RY1P47900 373 aa10.65□□□□□ -0.7
VAPB-203ENST00000463370 ID3Q02535 119 aa10.65□□□□□ -0.7
VAPB-203ENST00000463370 FAM216BQ8N7L0 139 aa10.65□□□□□ -0.7
VAPB-203ENST00000463370 LINC01560Q8TB33 94 aa10.65□□□□□ -0.7
VAPB-203ENST00000463370 LINC00052Q96N35 136 aa10.65□□□□□ -0.7
VAPB-203ENST00000463370 CCL13Q99616 98 aa10.65□□□□□ -0.7
VAPB-203ENST00000463370 SPIN2AQ99865 258 aa10.65□□□□□ -0.7
VAPB-203ENST00000463370 SPIN2BQ9BPZ2 258 aa10.65□□□□□ -0.7
VAPB-203ENST00000463370 AGMATQ9BSE5 352 aa10.65□□□□□ -0.7
VAPB-203ENST00000463370 PFDN2Q9UHV9 154 aa10.65□□□□□ -0.7
VAPB-203ENST00000463370 IGSF23A1L1A6 192 aa10.65□□□□□ -0.71
VAPB-203ENST00000463370 KIAA1324LA8MWY0 1029 aaPredicted RBP10.65□□□□□ -0.71
VAPB-203ENST00000463370 E7EQL1 145 aa10.65□□□□□ -0.71
VAPB-203ENST00000463370 CCL21O00585 134 aa10.65□□□□□ -0.71
VAPB-203ENST00000463370 TAAR5O14804 337 aa10.65□□□□□ -0.71
VAPB-203ENST00000463370 FGF16O43320 207 aa10.65□□□□□ -0.71
VAPB-203ENST00000463370 PITX3O75364 302 aa10.65□□□□□ -0.71
VAPB-203ENST00000463370 FGF2P09038 288 aa10.65□□□□□ -0.71
VAPB-203ENST00000463370 THOC7Q6I9Y2 204 aaKnown RBP10.65□□□□□ -0.71
VAPB-203ENST00000463370 ZNF295-AS1Q8N0V1 137 aa10.65□□□□□ -0.71
VAPB-203ENST00000463370 OR1S2Q8NGQ3 325 aa10.65□□□□□ -0.71
VAPB-203ENST00000463370 Q8TCH9 128 aa10.65□□□□□ -0.71
VAPB-203ENST00000463370 GAFA1Q96PS6 74 aa10.65□□□□□ -0.71
VAPB-203ENST00000463370 PSG11Q9UQ72 335 aa10.65□□□□□ -0.71
VAPB-203ENST00000463370 RNF115Q9Y4L5 304 aa10.65□□□□□ -0.71
VAPB-203ENST00000463370 SPINT2O43291 252 aa10.64□□□□□ -0.71
VAPB-203ENST00000463370 FBXO24O75426 580 aa10.64□□□□□ -0.71
VAPB-203ENST00000463370 TNFSF4P23510 183 aa10.64□□□□□ -0.71
VAPB-203ENST00000463370 CAV2P51636 162 aa10.64□□□□□ -0.71
VAPB-203ENST00000463370 EWSR1Q01844 656 aaKnown RBP eCLIP10.64□□□□□ -0.71
VAPB-203ENST00000463370 LY6DQ14210 128 aa10.64□□□□□ -0.71
VAPB-203ENST00000463370 PLEKHF2Q9H8W4 249 aa10.64□□□□□ -0.71
VAPB-203ENST00000463370 LIN7CQ9NUP9 197 aaKnown RBP10.64□□□□□ -0.71
VAPB-203ENST00000463370 CACNG5Q9UF02 275 aa10.64□□□□□ -0.71
VAPB-203ENST00000463370 LRBAP50851 2863 aa10.64□□□□□ -0.71
VAPB-203ENST00000463370 LINC00473A8K010 186 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 A8MXK9 166 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 CHST1O43916 411 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 PROP1O75360 226 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 SCO1O75880 301 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 PLAUP00749 431 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 ZNF134P52741 427 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 PAX9P55771 341 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 LOXL3P58215 753 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms