RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 UCP3P55916 312 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 DEFA1P59665 94 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 DEFA3P59666 94 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 TSPAN5P62079 268 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 KRTAP1-1Q07627 177 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 BTNL3Q6UXE8 466 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 SPNS3Q6ZMD2 512 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 ZNF782Q6ZMW2 699 aaPredicted RBP11.71□□□□□ -0.53
COL6A1-202ENST00000463060 SLC25A48Q6ZT89 311 aaKnown RBP11.71□□□□□ -0.53
COL6A1-202ENST00000463060 TMEM17Q86X19 198 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 LINC00311Q8N616 119 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 OR10V1Q8NGI7 309 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 FAM216AQ8WUB2 273 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 LEAP2Q969E1 77 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 GINS4Q9BRT9 223 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 SUCNR1Q9BXA5 334 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 MCUBQ9NWR8 336 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 GNG12Q9UBI6 72 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 SCP2D1Q9UJQ7 156 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 PSG11Q9UQ72 335 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 FLNAP21333 2647 aaKnown RBP11.7□□□□□ -0.54
COL6A1-202ENST00000463060 SLC31A2O15432 143 aa11.7□□□□□ -0.54
COL6A1-202ENST00000463060 HSPA12AO43301 675 aa11.7□□□□□ -0.54
COL6A1-202ENST00000463060 RGS11O94810 467 aa11.7□□□□□ -0.54
COL6A1-202ENST00000463060 TGFAP01135 160 aa11.7□□□□□ -0.54
COL6A1-202ENST00000463060 IGLV1-47P01700 117 aa11.7□□□□□ -0.54
COL6A1-202ENST00000463060 DCAF12L2Q5VW00 463 aa11.7□□□□□ -0.54
COL6A1-202ENST00000463060 CYB5R2Q6BCY4 276 aa11.7□□□□□ -0.54
COL6A1-202ENST00000463060 MZT2BQ6NZ67 158 aa11.7□□□□□ -0.54
COL6A1-202ENST00000463060 IDO2Q6ZQW0 420 aa11.7□□□□□ -0.54
COL6A1-202ENST00000463060 VMO1Q7Z5L0 202 aa11.7□□□□□ -0.54
COL6A1-202ENST00000463060 NRARPQ7Z6K4 114 aa11.7□□□□□ -0.54
COL6A1-202ENST00000463060 ABHD12Q8N2K0 398 aa11.7□□□□□ -0.54
COL6A1-202ENST00000463060 OR11H6Q8NGC7 330 aa11.7□□□□□ -0.54
COL6A1-202ENST00000463060 OCEL1Q9H607 264 aa11.7□□□□□ -0.54
COL6A1-202ENST00000463060 ABCA1O95477 2261 aa11.7□□□□□ -0.54
COL6A1-202ENST00000463060 IGHV2-26A0A0B4J1V2 119 aa11.69□□□□□ -0.54
COL6A1-202ENST00000463060 RNASEK-C17orf49H0YIS7 233 aa11.69□□□□□ -0.54
COL6A1-202ENST00000463060 J3QR06 171 aa11.69□□□□□ -0.54
COL6A1-202ENST00000463060 PROP1O75360 226 aa11.69□□□□□ -0.54
COL6A1-202ENST00000463060 TOX4O94842 621 aa11.69□□□□□ -0.54
COL6A1-202ENST00000463060 NDUFB6O95139 128 aa11.69□□□□□ -0.54
COL6A1-202ENST00000463060 AVPP01185 164 aa11.69□□□□□ -0.54
COL6A1-202ENST00000463060 IGLV2-14P01704 120 aa11.69□□□□□ -0.54
COL6A1-202ENST00000463060 IGHV3-7P01780 117 aa11.69□□□□□ -0.54
COL6A1-202ENST00000463060 SURF2Q15527 256 aaPredicted RBP11.69□□□□□ -0.54
COL6A1-202ENST00000463060 SCGB2B2Q4G0G5 96 aa11.69□□□□□ -0.54
COL6A1-202ENST00000463060 METTL11BQ5VVY1 283 aa11.69□□□□□ -0.54
COL6A1-202ENST00000463060 GLCCI1Q86VQ1 547 aa11.69□□□□□ -0.54
COL6A1-202ENST00000463060 OR9G1Q8NH87 305 aa11.69□□□□□ -0.54
COL6A1-202ENST00000463060 EDARADDQ8WWZ3 215 aa11.69□□□□□ -0.54
COL6A1-202ENST00000463060 UPRTQ96BW1 309 aa11.69□□□□□ -0.54
COL6A1-202ENST00000463060 SLC25A21Q9BQT8 299 aaPredicted RBP11.69□□□□□ -0.54
COL6A1-202ENST00000463060 FXYD6Q9H0Q3 95 aa11.69□□□□□ -0.54
COL6A1-202ENST00000463060 HEXA-AS1Q9H8Q6 139 aa11.69□□□□□ -0.54
COL6A1-202ENST00000463060 SIRT7Q9NRC8 400 aa11.69□□□□□ -0.54
COL6A1-202ENST00000463060 GPR132Q9UNW8 380 aa11.69□□□□□ -0.54
COL6A1-202ENST00000463060 GAB2Q9UQC2 676 aa11.69□□□□□ -0.54
COL6A1-202ENST00000463060 FAM172BPA6NC97 362 aa11.68□□□□□ -0.54
COL6A1-202ENST00000463060 J3QLI3 93 aa11.68□□□□□ -0.54
COL6A1-202ENST00000463060 PTTG1O95997 202 aa11.68□□□□□ -0.54
COL6A1-202ENST00000463060 TCRBP04435 133 aa11.68□□□□□ -0.54
COL6A1-202ENST00000463060 OR8U9P0C7N5 309 aa11.68□□□□□ -0.54
COL6A1-202ENST00000463060 SPNP16150 400 aa11.68□□□□□ -0.54
COL6A1-202ENST00000463060 HOXB4P17483 251 aaPredicted RBP11.68□□□□□ -0.54
COL6A1-202ENST00000463060 GNRHRP30968 328 aa11.68□□□□□ -0.54
COL6A1-202ENST00000463060 LUMP51884 338 aaPredicted RBP11.68□□□□□ -0.54
COL6A1-202ENST00000463060 PRB3Q04118 309 aaPredicted RBP11.68□□□□□ -0.54
COL6A1-202ENST00000463060 C1orf229Q6ZS94 237 aaPredicted RBP11.68□□□□□ -0.54
COL6A1-202ENST00000463060 ODF3L1Q8IXM7 274 aa11.68□□□□□ -0.54
COL6A1-202ENST00000463060 BEND2Q8NDZ0 799 aa11.68□□□□□ -0.54
COL6A1-202ENST00000463060 OR13D1Q8NGV5 346 aa11.68□□□□□ -0.54
COL6A1-202ENST00000463060 OR8U1Q8NH10 309 aa11.68□□□□□ -0.54
COL6A1-202ENST00000463060 MARCH1Q8TCQ1 289 aa11.68□□□□□ -0.54
COL6A1-202ENST00000463060 ST6GALNAC6Q969X2 333 aa11.68□□□□□ -0.54
COL6A1-202ENST00000463060 PCGF1Q9BSM1 259 aa11.68□□□□□ -0.54
COL6A1-202ENST00000463060 RSRP1Q9BUV0 290 aa11.68□□□□□ -0.54
COL6A1-202ENST00000463060 IFI27L2Q9H2X8 130 aa11.68□□□□□ -0.54
COL6A1-202ENST00000463060 DPAGT1Q9H3H5 408 aa11.68□□□□□ -0.54
COL6A1-202ENST00000463060 ZNRD1Q9P1U0 126 aa11.68□□□□□ -0.54
COL6A1-202ENST00000463060 AUP1Q9Y679 476 aa11.68□□□□□ -0.54
COL6A1-202ENST00000463060 FAM240BA0A1B0GVZ2 78 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 A0A1W2PPE3 182 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 ODF3BA8MYP8 253 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 LY6LH3BQJ8 138 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 SMAD7O15105 426 aaKnown RBP11.67□□□□□ -0.54
COL6A1-202ENST00000463060 ST8SIA5O15466 376 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 ZNF137PP52743 207 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 HERV-K104P61576 105 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 KLRD1Q13241 179 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 EIF4EBP1Q13541 118 aaPredicted RBP11.67□□□□□ -0.54
COL6A1-202ENST00000463060 OXA1LQ15070 435 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 RBMS2Q15434 407 aaKnown RBP11.67□□□□□ -0.54
COL6A1-202ENST00000463060 MSMO1Q15800 293 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 RGS21Q2M5E4 152 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 LDLRAD2Q5SZI1 272 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 NCR3LG1Q68D85 454 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 ZNF626Q68DY1 528 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 PNKDQ8N490 385 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 ZDHHC22Q8N966 263 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms