RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-223	ENST00000463004	GALNT14	Q96FL9	552 aa		10.03	□□□□□ -0.8
RBM39-223	ENST00000463004	C19orf12	Q9NSK7	152 aa		10.03	□□□□□ -0.8
RBM39-223	ENST00000463004	TNFSF18	Q9UNG2	199 aa		10.03	□□□□□ -0.8
RBM39-223	ENST00000463004	CXCL3	P19876	107 aa		10.03	□□□□□ -0.8
RBM39-223	ENST00000463004	HTD2	P86397	168 aa		10.03	□□□□□ -0.8
RBM39-223	ENST00000463004	TMEM42	Q69YG0	159 aa		10.03	□□□□□ -0.8
RBM39-223	ENST00000463004	PNRC2	Q9NPJ4	139 aa	Known RBP	10.03	□□□□□ -0.8
RBM39-223	ENST00000463004	PPP1R14D	Q9NXH3	145 aa		10.03	□□□□□ -0.8
RBM39-223	ENST00000463004	SLC45A2	Q9UMX9	530 aa		10.03	□□□□□ -0.8
RBM39-223	ENST00000463004	RIF1	Q5UIP0	2472 aa	Known RBP	10.03	□□□□□ -0.8
RBM39-223	ENST00000463004	MUC22	E2RYF6	1773 aa	Predicted RBP	10.03	□□□□□ -0.8
RBM39-223	ENST00000463004	LRRK1	Q38SD2	2015 aa		10.02	□□□□□ -0.8
RBM39-223	ENST00000463004	C17orf100	A8MU93	164 aa		10.02	□□□□□ -0.8
RBM39-223	ENST00000463004	IGHV3-13	P01766	116 aa		10.02	□□□□□ -0.8
RBM39-223	ENST00000463004	SCT	P09683	121 aa		10.02	□□□□□ -0.8
RBM39-223	ENST00000463004	SEC11B	P0C7V7	166 aa		10.02	□□□□□ -0.8
RBM39-223	ENST00000463004	COX7A1	P24310	79 aa		10.02	□□□□□ -0.8
RBM39-223	ENST00000463004	TMEM33	P57088	247 aa		10.02	□□□□□ -0.8
RBM39-223	ENST00000463004	TMEM267	Q0VDI3	215 aa	Predicted RBP	10.02	□□□□□ -0.8
RBM39-223	ENST00000463004	OR4D10	Q8NGI6	311 aa		10.02	□□□□□ -0.8
RBM39-223	ENST00000463004	OR9G1	Q8NH87	305 aa		10.02	□□□□□ -0.8
RBM39-223	ENST00000463004	C17orf50	Q8WW18	174 aa		10.02	□□□□□ -0.8
RBM39-223	ENST00000463004	STARD4	Q96DR4	205 aa		10.02	□□□□□ -0.8
RBM39-223	ENST00000463004	IGHV3OR15-7	A0A075B7D8	119 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	COX7A2P2	O60397	106 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	GYPA	P02724	150 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	SNRNP70	P08621	437 aa	Known RBP	10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	FBP1	P09467	338 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	PDLIM4	P50479	330 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	PJVK	Q0ZLH3	352 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	LYZL4	Q96KX0	146 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	PROK2	Q9HC23	129 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	ALPK2	Q86TB3	2170 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	MPDU1	O75352	247 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	KLK2	P20151	261 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	PPP1CC	P36873	323 aa	Known RBP	10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	NPBWR2	P48146	333 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	SPCS3	P61009	180 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	POLR2G	P62487	172 aa	Known RBP eCLIP	10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	C9orf152	Q5JTZ5	239 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	ZNF826P	Q6ZT77	177 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	FAM222B	Q8WU58	562 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	SAV1	Q9H4B6	383 aa	Predicted RBP	10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	TMEM106B	Q9NUM4	274 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	FAM24A	A6NFZ4	105 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	RHOB	P62745	196 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	TOR2A	Q5JU69	321 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	HARBI1	Q96MB7	349 aa		10.02	□□□□□ -0.81
RBM39-223	ENST00000463004	SVIL	O95425	2214 aa		10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	NKX2-6	A6NCS4	301 aa		10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	CORT	O00230	105 aa		10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	CHST1	O43916	411 aa		10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	FOXH1	O75593	365 aa		10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	PGLYRP1	O75594	196 aa	Predicted RBP	10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	OR2A4	O95047	310 aa		10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	LGALSL	Q3ZCW2	172 aa	Predicted RBP	10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	IGSF11	Q5DX21	431 aa		10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	DHRS11	Q6UWP2	260 aa		10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	LYZL2	Q7Z4W2	148 aa		10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	OR2A7	Q96R45	310 aa		10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	RALY	Q9UKM9	306 aa	Known RBP	10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	PUS1	Q9Y606	427 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	UBE2L5P	A0A1B0GUS4	154 aa		10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	SLC25A6	P12236	298 aa		10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	PLAC9	Q5JTB6	97 aa		10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	FAM166A	Q6J272	317 aa		10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	SMDT1	Q9H4I9	107 aa		10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	LPAR2	Q9HBW0	351 aa		10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	IGKV1-9	A0A0C4DH69	117 aa		10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	UNQ6494/PRO21346	Q6UXR6	183 aa		10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	KDF1	Q8NAX2	398 aa	Predicted RBP	10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	MRGPRF	Q96AM1	343 aa		10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	PIMREG	Q9BSJ6	248 aa		10.01	□□□□□ -0.81
RBM39-223	ENST00000463004	LIPF	P07098	398 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	IGFL2	Q6UWQ7	119 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	RTN4RL2	Q86UN3	420 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	WDR31	Q8NA23	367 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	NUP37	Q8NFH4	326 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	DYRK2	Q92630	601 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	TMEM230	Q96A57	120 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	PFDN5	Q99471	154 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	MED9	Q9NWA0	146 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	MTCH1	Q9NZJ7	389 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	WASHC3	Q9Y3C0	194 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	SLC25A15	Q9Y619	301 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	IGHV1-18	A0A0C4DH31	117 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004		H3BP45	60 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004		M0QZ24	198 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	LDLRAD4	O15165	306 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	PITX3	O75364	302 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	PSG2	P11465	335 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	BSPH1	Q075Z2	132 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	FAM122C	Q6P4D5	195 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	OR10A7	Q8NGE5	316 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	SNRNP40	Q96DI7	357 aa	Known RBP	10	□□□□□ -0.81
RBM39-223	ENST00000463004	KLHDC3	Q9BQ90	382 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	PTPRS	Q13332	1948 aa		10	□□□□□ -0.81
RBM39-223	ENST00000463004	NCBP2L	A6PVI3	153 aa	Known RBP	10	□□□□□ -0.81
RBM39-223	ENST00000463004	DKK1	O94907	266 aa		10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms