RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 PRRC2AP48634 2157 aaKnown RBP9□□□□□ -0.97
SMNDC1-203ENST00000460483 CENPVL3A0A0U1RRI6 287 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 MEX3AA1L020 520 aaKnown RBP9□□□□□ -0.97
SMNDC1-203ENST00000460483 MEIOCA2RUB1 952 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 RAB29O14966 203 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 NPFFO15130 113 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 RAB3DO95716 219 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 AKAIN1P0CW23 69 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 HOXB4P17483 251 aaPredicted RBP9□□□□□ -0.97
SMNDC1-203ENST00000460483 HLA-DMAP28067 261 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 BRS3P32247 399 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 GDNFP39905 211 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 LUMP51884 338 aaPredicted RBP9□□□□□ -0.97
SMNDC1-203ENST00000460483 LOXL3P58215 753 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 TAGLNQ01995 201 aaKnown RBP9□□□□□ -0.97
SMNDC1-203ENST00000460483 DYRK1AQ13627 763 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 FAM71F2Q6NXP2 309 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 STEAP1BQ6NZ63 245 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 C11orf88Q6PI97 169 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 C9orf139Q6ZV77 190 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 GVQW1Q8N7I0 195 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 ZNF436-AS1Q8NC38 126 aaPredicted RBP9□□□□□ -0.97
SMNDC1-203ENST00000460483 GIMAP1Q8WWP7 306 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 RPEQ96AT9 228 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 TSC22D3Q99576 134 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 PRRT1Q99946 306 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 C7orf50Q9BRJ6 194 aaKnown RBP9□□□□□ -0.97
SMNDC1-203ENST00000460483 TOLLIPQ9H0E2 274 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 ABCB10Q9NRK6 738 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 RDH8Q9NYR8 311 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 KLK11Q9UBX7 282 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 SCP2D1Q9UJQ7 156 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 ELF5Q9UKW6 265 aaPredicted RBP9□□□□□ -0.97
SMNDC1-203ENST00000460483 PSG11Q9UQ72 335 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 RBMX2Q9Y388 322 aaKnown RBP9□□□□□ -0.97
SMNDC1-203ENST00000460483 OR2W1Q9Y3N9 320 aa9□□□□□ -0.97
SMNDC1-203ENST00000460483 CHD3Q12873 2000 aaKnown RBP9□□□□□ -0.97
SMNDC1-203ENST00000460483 CREBBPQ92793 2442 aa8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 MEIS3P1A6NDR6 274 aa8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 NAP1L6A6NFF2 107 aa8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 RNASEK-C17orf49H0YIS7 233 aa8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 IFNA2P01563 188 aa8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 GAPDHP04406 335 aaKnown RBP8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 FCER2P06734 321 aa8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 HRH1P35367 487 aa8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 CBX3Q13185 183 aa8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 MSMO1Q15800 293 aa8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 HLA-DRB5Q30154 266 aa8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 ZNF57Q68EA5 555 aaPredicted RBP8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 DHRS11Q6UWP2 260 aa8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 SLC25A48Q6ZT89 311 aaKnown RBP8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 OVCH2Q7RTZ1 564 aa8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 CMTM1Q8IZ96 169 aa8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 ZBTB34Q8NCN2 500 aa8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 OR52L2PQ8NGH6 319 aa8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 OR10V1Q8NGI7 309 aa8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 ZNF418Q8TF45 676 aaPredicted RBP8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 SRRQ9GZT4 340 aa8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 DPAGT1Q9H3H5 408 aa8.99□□□□□ -0.97
SMNDC1-203ENST00000460483 CSMD1Q96PZ7 3565 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 PIGBOS1A0A0B4J2F0 54 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 ANKRD20A5PA0PJZ0 165 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 BUB1B-PAK6H3BSN5 160 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 IGLV1-47P01700 117 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 FAM157CP0CG43 387 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 PTHLHP12272 177 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 FCGR2CP31995 323 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 SAA4P35542 130 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 PPP1CCP36873 323 aaKnown RBP8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 GPR12P47775 334 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 GNG10P50151 68 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 DEFA1P59665 94 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 DEFA3P59666 94 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 DGCR2P98153 550 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 KRTAP1-1Q07627 177 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 AANATQ16613 207 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 IGSF11Q5DX21 431 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 RNASE12Q5GAN4 147 aaKnown RBP8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 H1FOOQ8IZA3 346 aaPredicted RBP8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 OR8H3Q8N146 312 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 LYG1Q8N1E2 194 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 MAFIPQ8WZ33 124 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 SNAPC3Q92966 411 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 TOMM40LQ969M1 308 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 ADTRPQ96IZ2 230 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 AKR1E2Q96JD6 320 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 AKIP1Q9NQ31 210 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 GAB2Q9UQC2 676 aa8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 SETXQ7Z333 2677 aaKnown RBP8.98□□□□□ -0.97
SMNDC1-203ENST00000460483 OTOGQ6ZRI0 2925 aa8.97□□□□□ -0.97
SMNDC1-203ENST00000460483 A0A0A6YYJ9 748 aa8.97□□□□□ -0.97
SMNDC1-203ENST00000460483 IGHV3-43A0A0B4J1X8 118 aa8.97□□□□□ -0.97
SMNDC1-203ENST00000460483 RNF212BA8MTL3 300 aa8.97□□□□□ -0.97
SMNDC1-203ENST00000460483 ODF3BA8MYP8 253 aa8.97□□□□□ -0.97
SMNDC1-203ENST00000460483 MMP23AO75900 390 aa8.97□□□□□ -0.97
SMNDC1-203ENST00000460483 PPYP01298 95 aa8.97□□□□□ -0.97
SMNDC1-203ENST00000460483 PMP2P02689 132 aa8.97□□□□□ -0.97
SMNDC1-203ENST00000460483 CD74P04233 296 aa8.97□□□□□ -0.97
SMNDC1-203ENST00000460483 CD3DP04234 171 aa8.97□□□□□ -0.97
SMNDC1-203ENST00000460483 AMY2AP04746 511 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms