RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 LPAR3Q9UBY5 353 aa13.95□□□□□ -0.18
HDAC7-217ENST00000459625 TBL2Q9Y4P3 447 aaKnown RBP13.95□□□□□ -0.18
HDAC7-217ENST00000459625 IGKV3D-20A0A0C4DH25 116 aa13.95□□□□□ -0.18
HDAC7-217ENST00000459625 SLC25A17O43808 307 aa13.95□□□□□ -0.18
HDAC7-217ENST00000459625 OTX1P32242 354 aaPredicted RBP13.95□□□□□ -0.18
HDAC7-217ENST00000459625 IL24Q13007 206 aa13.95□□□□□ -0.18
HDAC7-217ENST00000459625 AQP10Q96PS8 301 aa13.95□□□□□ -0.18
HDAC7-217ENST00000459625 RNF115Q9Y4L5 304 aa13.95□□□□□ -0.18
HDAC7-217ENST00000459625 MDKP21741 143 aaPredicted RBP13.95□□□□□ -0.18
HDAC7-217ENST00000459625 PRB3Q04118 309 aaPredicted RBP13.95□□□□□ -0.18
HDAC7-217ENST00000459625 LYRM2Q9NU23 88 aaPredicted RBP13.95□□□□□ -0.18
HDAC7-217ENST00000459625 SELENOKQ9Y6D0 94 aa13.95□□□□□ -0.18
HDAC7-217ENST00000459625 TRAV8-7A0A075B6U6 113 aa13.94□□□□□ -0.18
HDAC7-217ENST00000459625 HIST1H1AQ02539 215 aaPredicted RBP13.94□□□□□ -0.18
HDAC7-217ENST00000459625 C12orf73Q69YU5 71 aa13.94□□□□□ -0.18
HDAC7-217ENST00000459625 UBE2DNLQ8IWF7 75 aa13.94□□□□□ -0.18
HDAC7-217ENST00000459625 LGALS3P17931 250 aaKnown RBP13.94□□□□□ -0.18
HDAC7-217ENST00000459625 CKS2P33552 79 aa13.94□□□□□ -0.18
HDAC7-217ENST00000459625 WDFY1Q8IWB7 410 aa13.94□□□□□ -0.18
HDAC7-217ENST00000459625 TAF1P21675 1872 aa13.94□□□□□ -0.18
HDAC7-217ENST00000459625 OR2A4O95047 310 aa13.94□□□□□ -0.18
HDAC7-217ENST00000459625 LTBRP36941 435 aa13.94□□□□□ -0.18
HDAC7-217ENST00000459625 PNKDQ8N490 385 aa13.94□□□□□ -0.18
HDAC7-217ENST00000459625 VN1R17PQ8TDU5 208 aa13.94□□□□□ -0.18
HDAC7-217ENST00000459625 OR2A7Q96R45 310 aa13.94□□□□□ -0.18
HDAC7-217ENST00000459625 FRRS1LQ9P0K9 344 aa13.94□□□□□ -0.18
HDAC7-217ENST00000459625 TOMM7Q9P0U1 55 aa13.94□□□□□ -0.18
HDAC7-217ENST00000459625 ISLRO14498 428 aa13.94□□□□□ -0.18
HDAC7-217ENST00000459625 CXorf1O96002 111 aa13.94□□□□□ -0.18
HDAC7-217ENST00000459625 Q6ZNX1 250 aa13.94□□□□□ -0.18
HDAC7-217ENST00000459625 SLC35E3Q7Z769 313 aa13.94□□□□□ -0.18
HDAC7-217ENST00000459625 GPR82Q96P67 336 aa13.94□□□□□ -0.18
HDAC7-217ENST00000459625 GEMIN7Q9H840 131 aaKnown RBP13.94□□□□□ -0.18
HDAC7-217ENST00000459625 Q9N2K0 584 aa13.94□□□□□ -0.18
HDAC7-217ENST00000459625 OR2W1Q9Y3N9 320 aa13.94□□□□□ -0.18
HDAC7-217ENST00000459625 DDX60Q8IY21 1712 aaKnown RBP13.94□□□□□ -0.18
HDAC7-217ENST00000459625 LEUTXA8MZ59 168 aa13.93□□□□□ -0.18
HDAC7-217ENST00000459625 OR10J1P30954 320 aa13.93□□□□□ -0.18
HDAC7-217ENST00000459625 TMEM50BP56557 158 aa13.93□□□□□ -0.18
HDAC7-217ENST00000459625 HSPB7Q9UBY9 170 aa13.93□□□□□ -0.18
HDAC7-217ENST00000459625 SP9P0CG40 484 aa13.93□□□□□ -0.18
HDAC7-217ENST00000459625 DLK1P80370 383 aa13.93□□□□□ -0.18
HDAC7-217ENST00000459625 C9orf40Q8IXQ3 194 aa13.93□□□□□ -0.18
HDAC7-217ENST00000459625 PGLYRP3Q96LB9 341 aa13.93□□□□□ -0.18
HDAC7-217ENST00000459625 PAM16Q9Y3D7 125 aa13.93□□□□□ -0.18
HDAC7-217ENST00000459625 CA2P00918 260 aa13.93□□□□□ -0.18
HDAC7-217ENST00000459625 LILRA6Q6PI73 481 aa13.93□□□□□ -0.18
HDAC7-217ENST00000459625 C1orf174Q8IYL3 243 aa13.93□□□□□ -0.18
HDAC7-217ENST00000459625 F11RQ9Y624 299 aaKnown RBP13.93□□□□□ -0.18
HDAC7-217ENST00000459625 EIF3GO75821 320 aaKnown RBP eCLIP13.93□□□□□ -0.18
HDAC7-217ENST00000459625 ANOS1P23352 680 aa13.93□□□□□ -0.18
HDAC7-217ENST00000459625 PRSS42Q7Z5A4 293 aa13.93□□□□□ -0.18
HDAC7-217ENST00000459625 GPR61Q9BZJ8 451 aa13.93□□□□□ -0.18
HDAC7-217ENST00000459625 KCNE1BA0A087WTH5 132 aa13.93□□□□□ -0.18
HDAC7-217ENST00000459625 HBZP02008 142 aa13.93□□□□□ -0.18
HDAC7-217ENST00000459625 MBPP02686 304 aaPredicted RBP13.92□□□□□ -0.18
HDAC7-217ENST00000459625 CTSSP25774 331 aa13.92□□□□□ -0.18
HDAC7-217ENST00000459625 PCSK4Q6UW60 755 aa13.92□□□□□ -0.18
HDAC7-217ENST00000459625 C1orf162Q8NEQ5 155 aaPredicted RBP13.92□□□□□ -0.18
HDAC7-217ENST00000459625 IGHV3OR16-8A0A075B7F1 116 aa13.92□□□□□ -0.18
HDAC7-217ENST00000459625 KBTBD11O94819 623 aa13.92□□□□□ -0.18
HDAC7-217ENST00000459625 NUDT10Q8NFP7 164 aa13.92□□□□□ -0.18
HDAC7-217ENST00000459625 NUDT11Q96G61 164 aa13.92□□□□□ -0.18
HDAC7-217ENST00000459625 MTFP1Q9UDX5 166 aa13.92□□□□□ -0.18
HDAC7-217ENST00000459625 STARD6P59095 220 aa13.92□□□□□ -0.18
HDAC7-217ENST00000459625 ZAR1Q86SH2 424 aa13.92□□□□□ -0.18
HDAC7-217ENST00000459625 PLPP2O43688 288 aa13.92□□□□□ -0.18
HDAC7-217ENST00000459625 ALX3O95076 343 aa13.92□□□□□ -0.18
HDAC7-217ENST00000459625 STAG3L2P0CL84 134 aa13.92□□□□□ -0.18
HDAC7-217ENST00000459625 FAM214BQ7L5A3 538 aa13.92□□□□□ -0.18
HDAC7-217ENST00000459625 MMP9P14780 707 aa13.91□□□□□ -0.18
HDAC7-217ENST00000459625 CDCP2Q5VXM1 449 aa13.91□□□□□ -0.18
HDAC7-217ENST00000459625 ASXL3Q9C0F0 2248 aa13.91□□□□□ -0.18
HDAC7-217ENST00000459625 C3orf36Q3SXR2 165 aa13.91□□□□□ -0.18
HDAC7-217ENST00000459625 ATG101Q9BSB4 218 aa13.91□□□□□ -0.18
HDAC7-217ENST00000459625 RPL36A-HNRNPH2H7BZ11 118 aa13.91□□□□□ -0.18
HDAC7-217ENST00000459625 TRGV3P03979 118 aa13.91□□□□□ -0.18
HDAC7-217ENST00000459625 SNRPD3P62318 126 aaKnown RBP13.91□□□□□ -0.18
HDAC7-217ENST00000459625 ABHD12Q8N2K0 398 aa13.91□□□□□ -0.18
HDAC7-217ENST00000459625 TSPAN2O60636 221 aa13.91□□□□□ -0.18
HDAC7-217ENST00000459625 TGFAP01135 160 aa13.91□□□□□ -0.18
HDAC7-217ENST00000459625 COL5A1-AS1Q5SY13 56 aa13.91□□□□□ -0.18
HDAC7-217ENST00000459625 PRSS54Q6PEW0 395 aa13.91□□□□□ -0.18
HDAC7-217ENST00000459625 VKORC1L1Q8N0U8 176 aa13.91□□□□□ -0.18
HDAC7-217ENST00000459625 DUX3Q96PT4 197 aa13.91□□□□□ -0.18
HDAC7-217ENST00000459625 GPHA2Q96T91 129 aa13.91□□□□□ -0.18
HDAC7-217ENST00000459625 CTSDP07339 412 aaPredicted RBP13.91□□□□□ -0.18
HDAC7-217ENST00000459625 B4E171 279 aa13.9□□□□□ -0.18
HDAC7-217ENST00000459625 MBNL2Q5VZF2 373 aaKnown RBP13.9□□□□□ -0.18
HDAC7-217ENST00000459625 BTAF1O14981 1849 aa13.9□□□□□ -0.18
HDAC7-217ENST00000459625 IGHV1-45A0A0A0MS14 117 aa13.9□□□□□ -0.18
HDAC7-217ENST00000459625 PGPA6NDG6 321 aa13.9□□□□□ -0.18
HDAC7-217ENST00000459625 HSPB1P04792 205 aaKnown RBP13.9□□□□□ -0.18
HDAC7-217ENST00000459625 LINC00869P0C866 280 aa13.9□□□□□ -0.18
HDAC7-217ENST00000459625 CALHM1Q8IU99 346 aa13.9□□□□□ -0.18
HDAC7-217ENST00000459625 OR5AU1Q8NGC0 362 aa13.9□□□□□ -0.18
HDAC7-217ENST00000459625 FAM131CQ96AQ9 280 aa13.9□□□□□ -0.18
HDAC7-217ENST00000459625 SLC17A5Q9NRA2 495 aa13.9□□□□□ -0.18
HDAC7-217ENST00000459625 COX6CP09669 75 aa13.9□□□□□ -0.18
HDAC7-217ENST00000459625 LSM6P62312 80 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms