RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 TIMM23BQ5SRD1 257 aa14□□□□□ -0.17
CCDC43-202ENST00000457422 ALKBH2Q6NS38 261 aa14□□□□□ -0.17
CCDC43-202ENST00000457422 LFNGQ8NES3 379 aa14□□□□□ -0.17
CCDC43-202ENST00000457422 CACNG5Q9UF02 275 aa14□□□□□ -0.17
CCDC43-202ENST00000457422 WASF3Q9UPY6 502 aa14□□□□□ -0.17
CCDC43-202ENST00000457422 TOR1AO14656 332 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 TXNL1O43396 289 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 CST7O76096 145 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 HBZP02008 142 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 ZNF16P17020 682 aaPredicted RBP13.99□□□□□ -0.17
CCDC43-202ENST00000457422 IL2RGP31785 369 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 NPBWR1P48145 328 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 ZNF83P51522 516 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 MSMPQ1L6U9 139 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 ZNF474Q6S9Z5 364 aaPredicted RBP13.99□□□□□ -0.17
CCDC43-202ENST00000457422 RBMXL3Q8N7X1 1067 aaKnown RBP13.99□□□□□ -0.17
CCDC43-202ENST00000457422 OR2G3Q8NGZ4 309 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 GNPNAT1Q96EK6 184 aaPredicted RBP13.99□□□□□ -0.17
CCDC43-202ENST00000457422 ATP5SQ99766 215 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 ESRP2Q9H6T0 727 aaKnown RBP13.99□□□□□ -0.17
CCDC43-202ENST00000457422 METRNQ9UJH8 293 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 KLK10O43240 276 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 CRYABP02511 175 aaKnown RBP13.99□□□□□ -0.17
CCDC43-202ENST00000457422 TIMP3P35625 211 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 NBL1P41271 181 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 SULT1A1P50225 295 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 EIF4EBP1Q13541 118 aaPredicted RBP13.99□□□□□ -0.17
CCDC43-202ENST00000457422 PEA15Q15121 130 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 GUK1Q16774 197 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 C1orf185Q5T7R7 199 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 STX12Q86Y82 276 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 SEBOXQ9HB31 216 aaPredicted RBP13.99□□□□□ -0.17
CCDC43-202ENST00000457422 COA4Q9NYJ1 87 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 RFNGQ9Y644 331 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 KPTNQ9Y664 436 aa13.99□□□□□ -0.17
CCDC43-202ENST00000457422 A0A1B0GW64 132 aa13.98□□□□□ -0.17
CCDC43-202ENST00000457422 SYNGR2O43760 224 aa13.98□□□□□ -0.17
CCDC43-202ENST00000457422 GABRA2P47869 451 aa13.98□□□□□ -0.17
CCDC43-202ENST00000457422 COL10A1Q03692 680 aa13.98□□□□□ -0.17
CCDC43-202ENST00000457422 FAM53AQ6NSI3 398 aaPredicted RBP13.98□□□□□ -0.17
CCDC43-202ENST00000457422 TMEM217Q8N7C4 229 aa13.98□□□□□ -0.17
CCDC43-202ENST00000457422 OR52L2PQ8NGH6 319 aa13.98□□□□□ -0.17
CCDC43-202ENST00000457422 OR10Z1Q8NGY1 313 aa13.98□□□□□ -0.17
CCDC43-202ENST00000457422 S100PBPQ96BU1 408 aa13.98□□□□□ -0.17
CCDC43-202ENST00000457422 LURAP1Q96LR2 239 aa13.98□□□□□ -0.17
CCDC43-202ENST00000457422 RIF1Q5UIP0 2472 aaKnown RBP13.98□□□□□ -0.17
CCDC43-202ENST00000457422 ZFHX2Q9C0A1 2572 aaPredicted RBP13.98□□□□□ -0.17
CCDC43-202ENST00000457422 BOD1L1Q8NFC6 3051 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 AKAP13Q12802 2813 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 MED19A0JLT2 244 aaPredicted RBP13.97□□□□□ -0.17
CCDC43-202ENST00000457422 DFFBO76075 338 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 CFHR2P36980 270 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 SMUG1Q53HV7 270 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 LRP11Q86VZ4 500 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 FAM90A1Q86YD7 464 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 OR2Z1Q8NG97 314 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 SNIP1Q8TAD8 396 aaKnown RBP13.97□□□□□ -0.17
CCDC43-202ENST00000457422 FAM213BQ8TBF2 198 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 LRRC29Q8WV35 223 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 SRRM5B3KS81 715 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 FAM90A26D6RGX4 464 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 M0R1B8 84 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 TAS2R30P59541 319 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 KRBOX4Q5JUW0 171 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 TMEM88Q6PEY1 159 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 TRAT1Q6PIZ9 186 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 MRGPRDQ8TDS7 321 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 NINJ1Q92982 152 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 C5orf30Q96GV9 206 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 OR2D2Q9H210 308 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 HIPK2Q9H2X6 1198 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 RNF150Q9ULK6 438 aa13.97□□□□□ -0.17
CCDC43-202ENST00000457422 H3BP45 60 aa13.96□□□□□ -0.17
CCDC43-202ENST00000457422 IGHV3-13P01766 116 aa13.96□□□□□ -0.17
CCDC43-202ENST00000457422 EGR1P18146 543 aa13.96□□□□□ -0.17
CCDC43-202ENST00000457422 CBLN2Q8IUK8 224 aa13.96□□□□□ -0.17
CCDC43-202ENST00000457422 PBDC1Q9BVG4 233 aa13.96□□□□□ -0.17
CCDC43-202ENST00000457422 SFXN3Q9BWM7 321 aa13.96□□□□□ -0.17
CCDC43-202ENST00000457422 NDRG3Q9UGV2 375 aa13.96□□□□□ -0.17
CCDC43-202ENST00000457422 MMP24Q9Y5R2 645 aa13.96□□□□□ -0.17
CCDC43-202ENST00000457422 GLRXP35754 106 aa13.95□□□□□ -0.18
CCDC43-202ENST00000457422 GLIPR1P48060 266 aa13.95□□□□□ -0.18
CCDC43-202ENST00000457422 NKX6-1P78426 367 aaPredicted RBP13.95□□□□□ -0.18
CCDC43-202ENST00000457422 FGFRL1Q8N441 504 aa13.95□□□□□ -0.18
CCDC43-202ENST00000457422 CD177Q8N6Q3 437 aa13.95□□□□□ -0.18
CCDC43-202ENST00000457422 TCTEX1D1Q8N7M0 179 aa13.95□□□□□ -0.18
CCDC43-202ENST00000457422 TPRX1Q8N7U7 411 aa13.95□□□□□ -0.18
CCDC43-202ENST00000457422 SMDT1Q9H4I9 107 aa13.95□□□□□ -0.18
CCDC43-202ENST00000457422 DUSP13Q9UII6 198 aa13.95□□□□□ -0.18
CCDC43-202ENST00000457422 BTBD17A6NE02 478 aa13.95□□□□□ -0.18
CCDC43-202ENST00000457422 ZNF737O75373 536 aa13.95□□□□□ -0.18
CCDC43-202ENST00000457422 P0C879 139 aa13.95□□□□□ -0.18
CCDC43-202ENST00000457422 CEACAM8P31997 349 aaPredicted RBP13.95□□□□□ -0.18
CCDC43-202ENST00000457422 PRDX2P32119 198 aa13.95□□□□□ -0.18
CCDC43-202ENST00000457422 PPP1CCP36873 323 aaKnown RBP13.95□□□□□ -0.18
CCDC43-202ENST00000457422 PPT1P50897 306 aa13.95□□□□□ -0.18
CCDC43-202ENST00000457422 TMEM267Q0VDI3 215 aaPredicted RBP13.95□□□□□ -0.18
CCDC43-202ENST00000457422 CATR1Q13166 79 aa13.95□□□□□ -0.18
CCDC43-202ENST00000457422 HFEQ30201 348 aa13.95□□□□□ -0.18
CCDC43-202ENST00000457422 SP5Q6BEB4 398 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms