RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 OPALINQ96PE5 141 aa11.64□□□□□ -0.55
SF3B4-202ENST00000457312 NR1H4Q96RI1 486 aaPredicted RBP11.64□□□□□ -0.55
SF3B4-202ENST00000457312 APOL4Q9BPW4 351 aa11.64□□□□□ -0.55
SF3B4-202ENST00000457312 CHRDL1Q9BU40 450 aa11.64□□□□□ -0.55
SF3B4-202ENST00000457312 NEK6Q9HC98 313 aa11.64□□□□□ -0.55
SF3B4-202ENST00000457312 ZNF581Q9P0T4 197 aa11.64□□□□□ -0.55
SF3B4-202ENST00000457312 DMRT1Q9Y5R6 373 aa11.64□□□□□ -0.55
SF3B4-202ENST00000457312 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.63□□□□□ -0.55
SF3B4-202ENST00000457312 TMEM30CPA0ZSE6 113 aa11.63□□□□□ -0.55
SF3B4-202ENST00000457312 A8MWP6 167 aa11.63□□□□□ -0.55
SF3B4-202ENST00000457312 KRTAP29-1A8MX34 341 aaPredicted RBP11.63□□□□□ -0.55
SF3B4-202ENST00000457312 PPP5D1E7EU14 171 aa11.63□□□□□ -0.55
SF3B4-202ENST00000457312 SLC2A5P22732 501 aa11.63□□□□□ -0.55
SF3B4-202ENST00000457312 ADMP35318 185 aa11.63□□□□□ -0.55
SF3B4-202ENST00000457312 STEAP3Q658P3 488 aa11.63□□□□□ -0.55
SF3B4-202ENST00000457312 OR5B3Q8NH48 314 aa11.63□□□□□ -0.55
SF3B4-202ENST00000457312 CD300LFQ8TDQ1 290 aa11.63□□□□□ -0.55
SF3B4-202ENST00000457312 CCDC107Q8WV48 283 aa11.63□□□□□ -0.55
SF3B4-202ENST00000457312 C10orf35Q96D05 121 aa11.63□□□□□ -0.55
SF3B4-202ENST00000457312 DPCDQ9BVM2 203 aaPredicted RBP11.63□□□□□ -0.55
SF3B4-202ENST00000457312 GID8Q9NWU2 228 aa11.63□□□□□ -0.55
SF3B4-202ENST00000457312 COA4Q9NYJ1 87 aa11.63□□□□□ -0.55
SF3B4-202ENST00000457312 RCC2Q9P258 522 aaKnown RBP11.63□□□□□ -0.55
SF3B4-202ENST00000457312 V9GYQ6 96 aa11.63□□□□□ -0.55
SF3B4-202ENST00000457312 SLC22A1O15245 554 aa11.62□□□□□ -0.55
SF3B4-202ENST00000457312 HTR3BO95264 441 aa11.62□□□□□ -0.55
SF3B4-202ENST00000457312 MAGEA2P43356 314 aa11.62□□□□□ -0.55
SF3B4-202ENST00000457312 LGALS7P47929 136 aa11.62□□□□□ -0.55
SF3B4-202ENST00000457312 RPS7P62081 194 aaKnown RBP11.62□□□□□ -0.55
SF3B4-202ENST00000457312 SLC35D3Q5M8T2 416 aa11.62□□□□□ -0.55
SF3B4-202ENST00000457312 SPSB1Q96BD6 273 aa11.62□□□□□ -0.55
SF3B4-202ENST00000457312 SPAG8Q99932 426 aaPredicted RBP11.62□□□□□ -0.55
SF3B4-202ENST00000457312 ABHD14AQ9BUJ0 271 aa11.62□□□□□ -0.55
SF3B4-202ENST00000457312 AP3M1Q9Y2T2 418 aa11.62□□□□□ -0.55
SF3B4-202ENST00000457312 SAA2-SAA4A0A096LPE2 208 aa11.61□□□□□ -0.55
SF3B4-202ENST00000457312 IGHV4-28A0A0C4DH34 117 aa11.61□□□□□ -0.55
SF3B4-202ENST00000457312 NME4O00746 187 aa11.61□□□□□ -0.55
SF3B4-202ENST00000457312 SAA2P0DJI9 122 aaPredicted RBP11.61□□□□□ -0.55
SF3B4-202ENST00000457312 IL13RA2Q14627 380 aa11.61□□□□□ -0.55
SF3B4-202ENST00000457312 PSG5Q15238 335 aa11.61□□□□□ -0.55
SF3B4-202ENST00000457312 RBPMS2Q6ZRY4 209 aaKnown RBP11.61□□□□□ -0.55
SF3B4-202ENST00000457312 ZNF767PQ75MW2 155 aa11.61□□□□□ -0.55
SF3B4-202ENST00000457312 UTS2BQ765I0 119 aa11.61□□□□□ -0.55
SF3B4-202ENST00000457312 SUMF2Q8NBJ7 301 aa11.61□□□□□ -0.55
SF3B4-202ENST00000457312 AKIP1Q9NQ31 210 aa11.61□□□□□ -0.55
SF3B4-202ENST00000457312 NKIRAS1Q9NYS0 192 aa11.61□□□□□ -0.55
SF3B4-202ENST00000457312 SAMD4AQ9UPU9 718 aaKnown RBP11.61□□□□□ -0.55
SF3B4-202ENST00000457312 FAM90A23PA8MXZ1 464 aa11.6□□□□□ -0.55
SF3B4-202ENST00000457312 OR2C1O95371 312 aa11.6□□□□□ -0.55
SF3B4-202ENST00000457312 FADS2O95864 444 aaKnown RBP11.6□□□□□ -0.55
SF3B4-202ENST00000457312 ALKBH1Q13686 389 aaKnown RBP11.6□□□□□ -0.55
SF3B4-202ENST00000457312 MICAQ29983 383 aa11.6□□□□□ -0.55
SF3B4-202ENST00000457312 TMEM30BQ3MIR4 351 aa11.6□□□□□ -0.55
SF3B4-202ENST00000457312 PIGYQ3MUY2 71 aa11.6□□□□□ -0.55
SF3B4-202ENST00000457312 METTL21CQ5VZV1 264 aa11.6□□□□□ -0.55
SF3B4-202ENST00000457312 ZNF322Q6U7Q0 402 aaPredicted RBP11.6□□□□□ -0.55
SF3B4-202ENST00000457312 ARPINQ7Z6K5 226 aa11.6□□□□□ -0.55
SF3B4-202ENST00000457312 AQP11Q8NBQ7 271 aa11.6□□□□□ -0.55
SF3B4-202ENST00000457312 RPL36Q9Y3U8 105 aaKnown RBP11.6□□□□□ -0.55
SF3B4-202ENST00000457312 TMEM14AQ9Y6G1 99 aa11.6□□□□□ -0.55
SF3B4-202ENST00000457312 LOC107986453A0A1B0GWG9 222 aa11.59□□□□□ -0.55
SF3B4-202ENST00000457312 VSNL1P62760 191 aa11.59□□□□□ -0.55
SF3B4-202ENST00000457312 RHOGP84095 191 aa11.59□□□□□ -0.55
SF3B4-202ENST00000457312 GNMTQ14749 295 aa11.59□□□□□ -0.55
SF3B4-202ENST00000457312 RNF212Q495C1 297 aa11.59□□□□□ -0.55
SF3B4-202ENST00000457312 ELP2Q6IA86 826 aa11.59□□□□□ -0.55
SF3B4-202ENST00000457312 CPOQ8IVL8 374 aa11.59□□□□□ -0.55
SF3B4-202ENST00000457312 CCDC54Q8NEL0 328 aa11.59□□□□□ -0.55
SF3B4-202ENST00000457312 OR1L1Q8NH94 360 aa11.59□□□□□ -0.55
SF3B4-202ENST00000457312 FAM46BQ96A09 425 aa11.59□□□□□ -0.55
SF3B4-202ENST00000457312 TMEM68Q96MH6 324 aa11.59□□□□□ -0.55
SF3B4-202ENST00000457312 KRTAP9-2Q9BYQ4 174 aa11.59□□□□□ -0.55
SF3B4-202ENST00000457312 LRP1Q07954 4544 aaKnown RBP11.59□□□□□ -0.55
SF3B4-202ENST00000457312 ELOA3CA0A087WX78 387 aaPredicted RBP11.58□□□□□ -0.56
SF3B4-202ENST00000457312 FAM223BA6NKX1 122 aa11.58□□□□□ -0.56
SF3B4-202ENST00000457312 H0YJW9 148 aa11.58□□□□□ -0.56
SF3B4-202ENST00000457312 GGCTO75223 188 aaKnown RBP11.58□□□□□ -0.56
SF3B4-202ENST00000457312 RBBP9O75884 186 aa11.58□□□□□ -0.56
SF3B4-202ENST00000457312 TUSC2O75896 110 aa11.58□□□□□ -0.56
SF3B4-202ENST00000457312 GSTP1P09211 210 aaKnown RBP11.58□□□□□ -0.56
SF3B4-202ENST00000457312 DBTP11182 482 aaKnown RBP11.58□□□□□ -0.56
SF3B4-202ENST00000457312 MAP2K4P45985 399 aa11.58□□□□□ -0.56
SF3B4-202ENST00000457312 CXCR4P61073 352 aa11.58□□□□□ -0.56
SF3B4-202ENST00000457312 ZNF124Q15973 351 aa11.58□□□□□ -0.56
SF3B4-202ENST00000457312 MORN2Q502X0 79 aa11.58□□□□□ -0.56
SF3B4-202ENST00000457312 GLDNQ6ZMI3 551 aaPredicted RBP11.58□□□□□ -0.56
SF3B4-202ENST00000457312 Q6ZSN1 163 aa11.58□□□□□ -0.56
SF3B4-202ENST00000457312 GPHB5Q86YW7 130 aa11.58□□□□□ -0.56
SF3B4-202ENST00000457312 FAM223AQ8IWN6 122 aa11.58□□□□□ -0.56
SF3B4-202ENST00000457312 ADAD2Q8NCV1 583 aaKnown RBP11.58□□□□□ -0.56
SF3B4-202ENST00000457312 TEX47Q8TBZ9 253 aa11.58□□□□□ -0.56
SF3B4-202ENST00000457312 C17orf77Q96MU5 243 aa11.58□□□□□ -0.56
SF3B4-202ENST00000457312 CELA1Q9UNI1 258 aa11.58□□□□□ -0.56
SF3B4-202ENST00000457312 CCDC182A6NF36 153 aa11.57□□□□□ -0.56
SF3B4-202ENST00000457312 OR5H14A6NHG9 310 aa11.57□□□□□ -0.56
SF3B4-202ENST00000457312 SPINT2O43291 252 aa11.57□□□□□ -0.56
SF3B4-202ENST00000457312 SULT1B1O43704 296 aa11.57□□□□□ -0.56
SF3B4-202ENST00000457312 RPP14O95059 124 aaKnown RBP11.57□□□□□ -0.56
SF3B4-202ENST00000457312 HBZP02008 142 aa11.57□□□□□ -0.56
SF3B4-202ENST00000457312 ADARB1P78563 741 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms