RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 PKIGQ9Y2B9 76 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 BMPR1BO00238 502 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 MT-CO3P00414 261 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 OPRK1P41145 380 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 EDDM3BP56851 147 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 ST3GAL2Q16842 350 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 FOXB2Q5VYV0 432 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 GBGT1Q8N5D6 347 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 Q8WTZ3 238 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 R3HDM4Q96D70 268 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 QTRT1Q9BXR0 403 aaKnown RBP4.59□□□□□ -1.67
CSMD3-204ENST00000455883 A0A0A6YYC8 382 aaPredicted RBP4.59□□□□□ -1.67
CSMD3-204ENST00000455883 I3L1I5 382 aaPredicted RBP4.59□□□□□ -1.67
CSMD3-204ENST00000455883 CLEC2LP0C7M8 214 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 C1QTNF9P0C862 333 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 AGAP20933 346 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 RTN4RL1Q86UN2 441 aaPredicted RBP4.59□□□□□ -1.67
CSMD3-204ENST00000455883 SPSB4Q96A44 273 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 LY96Q9Y6Y9 160 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 PLNP26678 52 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 YRDCQ86U90 279 aaKnown RBP4.59□□□□□ -1.67
CSMD3-204ENST00000455883 FAM24BQ8N5W8 94 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 CHCHD1Q96BP2 118 aaKnown RBP4.59□□□□□ -1.67
CSMD3-204ENST00000455883 SHISA5Q8N114 240 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 OR10AD1Q8NGE0 317 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 OR51E1Q8TCB6 317 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 SMIM8Q96KF7 97 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 OR51B6Q9H340 312 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 NXT2Q9NPJ8 142 aaKnown RBP4.59□□□□□ -1.67
CSMD3-204ENST00000455883 RCC1P18754 421 aaPredicted RBP4.59□□□□□ -1.68
CSMD3-204ENST00000455883 MAS1LP35410 378 aa4.59□□□□□ -1.68
CSMD3-204ENST00000455883 FZD5Q13467 585 aa4.59□□□□□ -1.68
CSMD3-204ENST00000455883 PYCR3Q53H96 274 aa4.59□□□□□ -1.68
CSMD3-204ENST00000455883 FNDC7Q5VTL7 733 aa4.59□□□□□ -1.68
CSMD3-204ENST00000455883 RHBDD2Q6NTF9 364 aa4.59□□□□□ -1.68
CSMD3-204ENST00000455883 HHIPQ96QV1 700 aa4.59□□□□□ -1.68
CSMD3-204ENST00000455883 SIGLEC11Q96RL6 698 aa4.59□□□□□ -1.68
CSMD3-204ENST00000455883 LDB3O75112 727 aa4.59□□□□□ -1.68
CSMD3-204ENST00000455883 INAFM2P0DMQ5 153 aa4.59□□□□□ -1.68
CSMD3-204ENST00000455883 PAX1P15863 534 aa4.59□□□□□ -1.68
CSMD3-204ENST00000455883 ACAA2P42765 397 aaKnown RBP4.59□□□□□ -1.68
CSMD3-204ENST00000455883 ALKBH3Q96Q83 286 aaPredicted RBP4.59□□□□□ -1.68
CSMD3-204ENST00000455883 SLC25A5P05141 298 aaKnown RBP4.58□□□□□ -1.68
CSMD3-204ENST00000455883 FBXO45P0C2W1 286 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 RPL8P62917 257 aaKnown RBP4.58□□□□□ -1.68
CSMD3-204ENST00000455883 MMD2Q8IY49 270 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 OR13C6PQ8NH95 151 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 SGK494Q96LW2 274 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 SS18L1O75177 396 aaPredicted RBP4.58□□□□□ -1.68
CSMD3-204ENST00000455883 PTP4A3O75365 173 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 SMIM13P0DJ93 91 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 ANKRD37Q7Z713 158 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 SCCPDHQ8NBX0 429 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 ZNF740Q8NDX6 193 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 C16orf52Q8NHV5 167 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 TMEM37Q8WXS4 190 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 FMC1Q96HJ9 113 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 CHAC1Q9BUX1 264 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 SRD5A3Q9H8P0 318 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 PLAGL1Q9UM63 463 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 TMEM272A0A1B0GTI8 110 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 AESQ08117 197 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 IBA57Q5T440 356 aaKnown RBP4.58□□□□□ -1.68
CSMD3-204ENST00000455883 OR10V1Q8NGI7 309 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 OR4A5Q8NH83 315 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 SPPL3Q8TCT6 385 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 C20orf24Q9BUV8 137 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 NTMQ9P121 344 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 UPK1AO00322 258 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 SYNGR1O43759 233 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 NEURL1O76050 574 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 EXOSC7Q15024 291 aaKnown RBP4.58□□□□□ -1.68
CSMD3-204ENST00000455883 NNATQ16517 81 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 C10orf113Q5VZT2 155 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 ZNF414Q96IQ9 312 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 KLK11Q9UBX7 282 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 HSPB7Q9UBY9 170 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 MBD1Q9UIS9 605 aaPredicted RBP4.58□□□□□ -1.68
CSMD3-204ENST00000455883 ATXN7L1Q9ULK2 861 aaPredicted RBP4.58□□□□□ -1.68
CSMD3-204ENST00000455883 PRDX2P32119 198 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 OPRM1P35372 400 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 HSD17B8Q92506 261 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 RAB1CQ92928 201 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 CDC14CA4D256 554 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 RPS16P62249 146 aaKnown RBP4.58□□□□□ -1.68
CSMD3-204ENST00000455883 MGAT2Q10469 447 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 C1orf100Q5SVJ3 147 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 LDLRAD1Q5T700 205 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 ZNF511Q8NB15 262 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 NUDT11Q96G61 164 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 YBX2Q9Y2T7 364 aaKnown RBP4.58□□□□□ -1.68
CSMD3-204ENST00000455883 TM4SF5O14894 197 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 TNFSF14O43557 240 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 B4GALT3O60512 393 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 AKR7A3O95154 331 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 RND3P61587 244 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 TUSC1Q2TAM9 212 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 RBM45Q8IUH3 476 aaKnown RBP4.58□□□□□ -1.68
CSMD3-204ENST00000455883 SOSTQ9BQB4 213 aa4.58□□□□□ -1.68
CSMD3-204ENST00000455883 PRDM13Q9H4Q3 707 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms