RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 CHD8Q9HCK8 2581 aa10.17□□□□□ -0.78
SMPD4-213ENST00000454468 SMPD2O60906 423 aa10.16□□□□□ -0.78
SMPD4-213ENST00000454468 ADCYAP1P18509 176 aa10.16□□□□□ -0.78
SMPD4-213ENST00000454468 TUBG1P23258 451 aa10.16□□□□□ -0.78
SMPD4-213ENST00000454468 GLIPR1P48060 266 aa10.16□□□□□ -0.78
SMPD4-213ENST00000454468 NAAAQ02083 359 aa10.16□□□□□ -0.78
SMPD4-213ENST00000454468 MRPL30Q8TCC3 161 aaKnown RBP10.16□□□□□ -0.78
SMPD4-213ENST00000454468 GPR146Q96CH1 333 aa10.16□□□□□ -0.78
SMPD4-213ENST00000454468 RHOVQ96L33 236 aa10.16□□□□□ -0.78
SMPD4-213ENST00000454468 POMT1Q9Y6A1 747 aa10.16□□□□□ -0.78
SMPD4-213ENST00000454468 H7C1Q1 480 aa10.16□□□□□ -0.78
SMPD4-213ENST00000454468 SULT1A2P50226 295 aa10.16□□□□□ -0.78
SMPD4-213ENST00000454468 IL13RA2Q14627 380 aa10.16□□□□□ -0.78
SMPD4-213ENST00000454468 ZNF528Q3MIS6 628 aa10.16□□□□□ -0.78
SMPD4-213ENST00000454468 LOXL4Q96JB6 756 aa10.16□□□□□ -0.78
SMPD4-213ENST00000454468 DMXL1Q9Y485 3027 aa10.16□□□□□ -0.78
SMPD4-213ENST00000454468 UBE2L5PA0A1B0GUS4 154 aa10.16□□□□□ -0.78
SMPD4-213ENST00000454468 C9JQL5 133 aa10.16□□□□□ -0.78
SMPD4-213ENST00000454468 RAB11AP62491 216 aa10.16□□□□□ -0.78
SMPD4-213ENST00000454468 BARX1Q9HBU1 254 aaPredicted RBP10.16□□□□□ -0.78
SMPD4-213ENST00000454468 MRPS18CQ9Y3D5 142 aaKnown RBP10.16□□□□□ -0.78
SMPD4-213ENST00000454468 MMP24Q9Y5R2 645 aa10.16□□□□□ -0.78
SMPD4-213ENST00000454468 LAMA5O15230 3695 aa10.16□□□□□ -0.78
SMPD4-213ENST00000454468 LRP5LA4QPB2 252 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 CA11O75493 328 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 CRYAAP02489 173 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 OPN1MWP04001 364 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 IFNA4P05014 189 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 FAM157CP0CG43 387 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 OPN1MW2P0DN77 364 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 OPN1MW3P0DN78 364 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 WFDC8Q8IUA0 241 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 RPRMLQ8N4K4 120 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 GALNT14Q96FL9 552 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 UNKLQ9H9P5 680 aaKnown RBP10.15□□□□□ -0.78
SMPD4-213ENST00000454468 CLEC18AA5D8T8 446 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 P2RY1P47900 373 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 UQCC3Q6UW78 93 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 IL34Q6ZMJ4 242 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 FAM24BQ8N5W8 94 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 CLEC18CQ8NCF0 446 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 SPSB4Q96A44 273 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 CLCC1Q96S66 551 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 SPRY4Q9C004 299 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 RIMS4Q9H426 269 aaPredicted RBP10.15□□□□□ -0.78
SMPD4-213ENST00000454468 MED9Q9NWA0 146 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 ANAPC10Q9UM13 185 aa10.15□□□□□ -0.78
SMPD4-213ENST00000454468 A0A0G2JRQ6 117 aa10.15□□□□□ -0.79
SMPD4-213ENST00000454468 CECR9P0C854 216 aa10.15□□□□□ -0.79
SMPD4-213ENST00000454468 SELENOVP59797 346 aa10.15□□□□□ -0.79
SMPD4-213ENST00000454468 PLA2G2CQ5R387 149 aa10.15□□□□□ -0.79
SMPD4-213ENST00000454468 FAM185AQ8N0U4 392 aa10.15□□□□□ -0.79
SMPD4-213ENST00000454468 RSRP1Q9BUV0 290 aa10.15□□□□□ -0.79
SMPD4-213ENST00000454468 WASF3Q9UPY6 502 aa10.15□□□□□ -0.79
SMPD4-213ENST00000454468 SPG11Q96JI7 2443 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 TRBV6-7A0A0A0MS04 114 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 PSPNO60542 156 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 BTF3P20290 206 aaKnown RBP10.14□□□□□ -0.79
SMPD4-213ENST00000454468 RPS10P46783 165 aaKnown RBP10.14□□□□□ -0.79
SMPD4-213ENST00000454468 DVL1P1P54792 670 aaPredicted RBP10.14□□□□□ -0.79
SMPD4-213ENST00000454468 SRSF4Q08170 494 aaKnown RBP10.14□□□□□ -0.79
SMPD4-213ENST00000454468 AWAT1Q58HT5 328 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 COLCA1Q6ZS62 124 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 MOGAT3Q86VF5 341 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 GTF3AQ92664 365 aaKnown RBP10.14□□□□□ -0.79
SMPD4-213ENST00000454468 SAT2Q96F10 170 aaPredicted RBP10.14□□□□□ -0.79
SMPD4-213ENST00000454468 OR51I2Q9H344 312 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 CLN8Q9UBY8 286 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 YLPM1P49750 1951 aaKnown RBP10.14□□□□□ -0.79
SMPD4-213ENST00000454468 A0A1W2PPE2 198 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 TMEM30CPA0ZSE6 113 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 CEACAM18A8MTB9 384 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 UBE2KP61086 200 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 COL10A1Q03692 680 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 BAXQ07812 192 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 DBX2Q6ZNG2 339 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 LRP11Q86VZ4 500 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 ZCCHC24Q8N2G6 241 aaKnown RBP10.14□□□□□ -0.79
SMPD4-213ENST00000454468 IL36GQ9NZH8 169 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 METRNQ9UJH8 293 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 hCG_1809904A0A1W2PP81 198 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 A0A1W2PR64 198 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 A0A1W2PRV1 198 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 CRYBA1P05813 215 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 SMIM6P0DI80 62 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 CCL20P78556 96 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 H2BFWTQ7Z2G1 175 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 ZNF709Q8N972 641 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 ZNRF1Q8ND25 227 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 BOD1Q96IK1 185 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 C18orf12Q96KH6 178 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 OPA3Q9H6K4 179 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 RNF122Q9H9V4 155 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 TUBD1Q9UJT1 453 aa10.14□□□□□ -0.79
SMPD4-213ENST00000454468 FCGR3BO75015 233 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 CDS2O95674 445 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 IFNA10P01566 189 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 HBZP02008 142 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 S100A8P05109 93 aa10.13□□□□□ -0.79
SMPD4-213ENST00000454468 WDR86Q86TI4 376 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms