RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 UBE2V2Q15819 145 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 STXBP6Q8NFX7 210 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 WNT2BQ93097 391 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 SOSTQ9BQB4 213 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 DHRS7CA6NNS2 312 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 MGST3O14880 152 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 HOXB1P14653 301 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 ZNF124Q15973 351 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 TMEM255AQ5JRV8 349 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 SPANXN1Q5VSR9 72 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 GBGT1Q8N5D6 347 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 CHAC2Q8WUX2 184 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 CCL27Q9Y4X3 112 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 HELTA6NFD8 242 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 F12P00748 615 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 ATP5J2P56134 94 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 SCGB1D4Q6XE38 83 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 SHANK3Q9BYB0 1731 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 IGHV3OR16-12A0A075B7B8 117 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 GCSAMQ8N6F7 178 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 NUP37Q8NFH4 326 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 PRDM6Q9NQX0 595 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 KLHDC2Q9Y2U9 406 aa12.14□□□□□ -0.47
RAPGEF3-205ENST00000449771 NGFRP08138 427 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 CD99P14209 185 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 C16orf92Q96LL3 132 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 TBX15Q96SF7 602 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 RCC2Q9P258 522 aaKnown RBP12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 ADAMTSL1Q8N6G6 1762 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 PAGE4O60829 102 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 CYB5R3P00387 301 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 SLC35E3Q7Z769 313 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 TP53RKQ96S44 253 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 LAMB2P55268 1798 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 TSPAN2O60636 221 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 HBZP02008 142 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 RPL27AP46776 148 aaKnown RBP12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 PPOXP50336 477 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 GUCD1Q96NT3 240 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 RAB33BQ9H082 229 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 SMAD7O15105 426 aaKnown RBP12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 PDE6DO43924 150 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 SS18L1O75177 396 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 C1QAP02745 245 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 MMP16P51512 607 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 DLK1P80370 383 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 MARVELD3Q96A59 401 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 METTL26Q96S19 204 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 RNF115Q9Y4L5 304 aa12.13□□□□□ -0.47
RAPGEF3-205ENST00000449771 CRHP06850 196 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 ZNF137PP52743 207 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 LY6EQ16553 131 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 MRPL54Q6P161 138 aaKnown RBP12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 OR10J6PQ8NGY7 276 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 MARS2Q96GW9 593 aaKnown RBP12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 MAP1LC3CQ9BXW4 147 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 VAX2Q9UIW0 290 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 UBE2L6O14933 153 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 SMPD2O60906 423 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 CLDN18P56856 261 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 TM4SF20Q53R12 229 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 LYRM7Q5U5X0 104 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 OR4A5Q8NH83 315 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 PAXXQ9BUH6 204 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 C5orf52A6NGY3 159 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 SIGLEC5O15389 551 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 HLA-DRB5Q30154 266 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 CDCP2Q5VXM1 449 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 ZNF107Q9UII5 783 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 PILRAQ9UKJ1 303 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 SCN1AP35498 2009 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 LINC00587B1AMM8 73 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 IFNL4K9M1U5 179 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 HYPMO75409 117 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 OR2H2O95918 312 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 ASAH2BP0C7U1 165 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 PGA4P0DJD7 388 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 KLRB1Q12918 225 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 OR2T10Q8NGZ9 312 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 MYOZ3Q8TDC0 251 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 TMEM140Q9NV12 185 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 KLF9Q13886 244 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 LRRC75BQ2VPJ9 315 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 UNQ5815/PRO19632Q6UWF5 114 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 HOGA1Q86XE5 327 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 CALHM1Q8IU99 346 aa12.12□□□□□ -0.47
RAPGEF3-205ENST00000449771 FCGR3AP08637 254 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 PNRC1Q12796 327 aaPredicted RBP12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 ZNF841Q6ZN19 808 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 ZNF826PQ6ZT77 177 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 OR5AU1Q8NGC0 362 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 VN1R17PQ8TDU5 208 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 IGKV1-8A0A0C4DH67 115 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 A0A1B0GV72 72 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 A0A1W2PS18 150 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 DEDDO75618 318 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 MC5RP33032 325 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 PDLIM4P50479 330 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 EFNB2P52799 333 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 ABHD14BQ96IU4 210 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms