RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 HOGA1Q86XE5 327 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 CDC20BQ86Y33 519 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 UEVLDQ8IX04 471 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 TMEM256Q8N2U0 113 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 CLDN19Q8N6F1 224 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 TMEM99Q8N816 258 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 CYB561D1Q8N8Q1 229 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 OR5AR1Q8NGP9 310 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 OR6N2Q8NGY6 317 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 OR52E5Q8NH55 327 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 MFSD8Q8NHS3 518 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 C16orf52Q8NHV5 167 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 CMTM2Q8TAZ6 248 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 RNF128Q8TEB7 428 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 C2orf15Q8WU43 125 aaKnown RBP3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 SKA2Q8WVK7 121 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 LINC00476Q8WZB0 136 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 MAL2Q969L2 176 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 PIGTQ969N2 578 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 TMEM230Q96A57 120 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 GRAMD2BQ96HH9 432 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 C8orf49Q96NF6 230 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 SDF2Q99470 211 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 TBX5Q99593 518 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 SPIN2AQ99865 258 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 RARRES2Q99969 163 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 SPIN2BQ9BPZ2 258 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 LRRC61Q9BV99 259 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 MLST8Q9BVC4 326 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 STRADBQ9C0K7 418 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 LPAR5Q9H1C0 372 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 CXCL16Q9H2A7 254 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 ZDHHC6Q9H6R6 413 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 NGBQ9NPG2 151 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 GPR84Q9NQS5 396 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 FAM206AQ9NX38 181 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 SIGLEC8Q9NYZ4 499 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 VDAC3Q9Y277 283 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 KLHDC2Q9Y2U9 406 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 OARD1Q9Y530 152 aa3.06□□□□□ -1.92
HMGB3P8-201ENST00000449709 MDC1Q14676 2089 aaKnown RBP3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 TRIP12Q14669 1992 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 CENPVL3A0A0U1RRI6 287 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 TSPAN11A1L157 253 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 TMEM8BA6NDV4 472 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 FBLL1A6NHQ2 334 aaKnown RBP3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 CD300LBA8K4G0 201 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 CRXO43186 299 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 ZNF253O75346 499 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 VENTXO95231 258 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 MPZL1O95297 269 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 TNFP01375 233 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 HBE1P02100 147 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 GPX1P07203 203 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 ZNF728P0DKX0 622 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 ZNF20P17024 532 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 SRD5A1P18405 259 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 FUT1P19526 365 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 USF1P22415 310 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 RPL12P30050 165 aaKnown RBP3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 FCGR2CP31995 323 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 ACVR1BP36896 505 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 DNASE1L1P49184 302 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 PGFP49763 221 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 HINT1P49773 126 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 TAS2R41P59536 307 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 ERVK11-1P61568 191 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 LCN6P62502 163 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 SUPT4H1P63272 117 aaKnown RBP3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 SEC11AP67812 179 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 MRPS34P82930 218 aaKnown RBP3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 HMGCS1Q01581 520 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 ZNF117Q03924 483 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 LTBQ06643 244 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 CXCL9Q07325 125 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 KRTAP1-1Q07627 177 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 SMAGPQ0VAQ4 97 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 TSTA3Q13630 321 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 LY6DQ14210 128 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 GNMTQ14749 295 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 ZIC1Q15915 447 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 UPP1Q16831 310 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 MPV17LQ2QL34 196 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 TMEM128Q5BJH2 165 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 VAX1Q5SQQ9 334 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 LY6G5CQ5SRR4 150 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 TMEM78Q5T7P6 136 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 FAM78BQ5VT40 261 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 CST9LP1Q5W188 147 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 NOXRED1Q6NXP6 359 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 TRIM40Q6P9F5 258 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 STAC2Q6ZMT1 411 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 Q6ZS49 121 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 C19orf35Q6ZS72 473 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 Q6ZS92 163 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 BHLHA9Q7RTU4 235 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 LHFPL1Q86WI0 220 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 LYPD6Q86Y78 171 aa3.05□□□□□ -1.92
HMGB3P8-201ENST00000449709 CLECL1Q8IZS7 167 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms