RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 OR4A8P0C604 315 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 SLC25A47Q6Q0C1 308 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 CLDND2Q8NHS1 167 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 PIAS2O75928 621 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 TIAF1O95411 115 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 GLB1P16278 677 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 CBLN1P23435 193 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 HINT1P49773 126 aaPredicted RBP10.68□□□□□ -0.7
UBE3B-204ENST00000449510 RBM11P57052 281 aaKnown RBP10.68□□□□□ -0.7
UBE3B-204ENST00000449510 PSG4Q00888 419 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 LHFPL1Q86WI0 220 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 KDF1Q8NAX2 398 aaPredicted RBP10.68□□□□□ -0.7
UBE3B-204ENST00000449510 CIB3Q96Q77 187 aaPredicted RBP10.68□□□□□ -0.7
UBE3B-204ENST00000449510 OR1A1Q9P1Q5 309 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 EREGO14944 169 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 STARD6P59095 220 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 MRPL49Q13405 166 aaKnown RBP10.68□□□□□ -0.7
UBE3B-204ENST00000449510 TMEM183AQ8IXX5 376 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 OR10D3Q8NH80 312 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 GTF3AQ92664 365 aaKnown RBP10.68□□□□□ -0.7
UBE3B-204ENST00000449510 LIME1Q9H400 295 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 FNDC1Q4ZHG4 1894 aaPredicted RBP10.68□□□□□ -0.7
UBE3B-204ENST00000449510 SNURFLB1AK76 121 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 NPIPB7O75200 414 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 HSBP1O75506 76 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 IGHV2-5P01817 119 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 CEACAM1P13688 526 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 ANOS1P23352 680 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 CCL7P80098 99 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 OR2M3Q8NG83 312 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 OR4C5Q8NGB2 326 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 MRGPRDQ8TDS7 321 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 RAB24Q969Q5 203 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 LIN7CQ9NUP9 197 aaKnown RBP10.67□□□□□ -0.7
UBE3B-204ENST00000449510 ABI3Q9P2A4 366 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 PSG11Q9UQ72 335 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 PCNX3Q9H6A9 2034 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 C1QTNF9BB2RNN3 333 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 CDIPTO14735 213 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 PGLYRP1O75594 196 aaPredicted RBP10.67□□□□□ -0.7
UBE3B-204ENST00000449510 FGF5P12034 268 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 SUMO3P55854 103 aaPredicted RBP10.67□□□□□ -0.7
UBE3B-204ENST00000449510 QRFPP83859 136 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 TMEM183BQ1AE95 376 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 STARD4Q96DR4 205 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 B3GAT1Q9P2W7 334 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 FCGR3BO75015 233 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 HIPK2Q9H2X6 1198 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 RNF122Q9H9V4 155 aa10.67□□□□□ -0.7
UBE3B-204ENST00000449510 SLC22A20A6NK97 555 aa10.66□□□□□ -0.7
UBE3B-204ENST00000449510 HOXC4P09017 264 aaPredicted RBP10.66□□□□□ -0.7
UBE3B-204ENST00000449510 OTX1P32242 354 aaPredicted RBP10.66□□□□□ -0.7
UBE3B-204ENST00000449510 IGLV3-21P80748 117 aaPredicted RBP10.66□□□□□ -0.7
UBE3B-204ENST00000449510 OR5AU1Q8NGC0 362 aa10.66□□□□□ -0.7
UBE3B-204ENST00000449510 MSI2Q96DH6 328 aaKnown RBP10.66□□□□□ -0.7
UBE3B-204ENST00000449510 SEBOXQ9HB31 216 aaPredicted RBP10.66□□□□□ -0.7
UBE3B-204ENST00000449510 ZNF331Q9NQX6 463 aaPredicted RBP10.66□□□□□ -0.7
UBE3B-204ENST00000449510 TECRQ9NZ01 308 aaKnown RBP10.66□□□□□ -0.7
UBE3B-204ENST00000449510 NCOA6Q14686 2063 aaPredicted RBP10.66□□□□□ -0.7
UBE3B-204ENST00000449510 LOC102723971A0A1B0GUV8 181 aa10.66□□□□□ -0.7
UBE3B-204ENST00000449510 C2CD4DB7Z1M9 353 aa10.66□□□□□ -0.7
UBE3B-204ENST00000449510 NGFP01138 241 aa10.66□□□□□ -0.7
UBE3B-204ENST00000449510 CEBPDP49716 269 aaPredicted RBP10.66□□□□□ -0.7
UBE3B-204ENST00000449510 FOXO1Q12778 655 aa10.66□□□□□ -0.7
UBE3B-204ENST00000449510 ZP4Q12836 540 aa10.66□□□□□ -0.7
UBE3B-204ENST00000449510 ZNF506Q5JVG8 444 aa10.66□□□□□ -0.7
UBE3B-204ENST00000449510 NOL4LQ96MY1 436 aaPredicted RBP10.66□□□□□ -0.7
UBE3B-204ENST00000449510 SLC17A3O00476 420 aa10.66□□□□□ -0.7
UBE3B-204ENST00000449510 MT-CO2P00403 227 aa10.66□□□□□ -0.7
UBE3B-204ENST00000449510 OR10J1P30954 320 aa10.66□□□□□ -0.7
UBE3B-204ENST00000449510 UCP3P55916 312 aa10.66□□□□□ -0.7
UBE3B-204ENST00000449510 SPCS3P61009 180 aa10.66□□□□□ -0.7
UBE3B-204ENST00000449510 DNM1P46Q6ZS02 220 aa10.66□□□□□ -0.7
UBE3B-204ENST00000449510 OR10G8Q8NGN5 311 aa10.66□□□□□ -0.7
UBE3B-204ENST00000449510 APH1AQ96BI3 265 aa10.66□□□□□ -0.7
UBE3B-204ENST00000449510 NDUFAF3Q9BU61 184 aa10.66□□□□□ -0.7
UBE3B-204ENST00000449510 WNT10AQ9GZT5 417 aa10.66□□□□□ -0.7
UBE3B-204ENST00000449510 B4GALT7Q9UBV7 327 aa10.66□□□□□ -0.7
UBE3B-204ENST00000449510 CFAP54Q96N23 3096 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 DOPEY2Q9Y3R5 2298 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 RNF212BA8MTL3 300 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 HRASP01112 189 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 CSRP1P21291 193 aaKnown RBP10.65□□□□□ -0.7
UBE3B-204ENST00000449510 CCR5P51681 352 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 TMEM211Q6ICI0 200 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 TMEM256Q8N2U0 113 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 SP7Q8TDD2 431 aaPredicted RBP10.65□□□□□ -0.7
UBE3B-204ENST00000449510 TAF15Q92804 592 aaKnown RBP eCLIP10.65□□□□□ -0.7
UBE3B-204ENST00000449510 FAM131CQ96AQ9 280 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 DEFB127Q9H1M4 99 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 MANBALQ9NQG1 85 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 OR2W1Q9Y3N9 320 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 HSBP1L1C9JCN9 74 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 PLA2G5P39877 138 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 CYB561P49447 251 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 SRSF4Q08170 494 aaKnown RBP10.65□□□□□ -0.7
UBE3B-204ENST00000449510 GTF3C1Q12789 2109 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 TIGITQ495A1 244 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 GCNT2Q8N0V5 402 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 ZNF596Q8TC21 504 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms