RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 DISC1C4P0D8 188 aa11.94□□□□□ -0.5
SHANK2-210ENST00000449116 RNASEK-C17orf49H0YIS7 233 aa11.94□□□□□ -0.5
SHANK2-210ENST00000449116 ITGB1BP1O14713 200 aa11.94□□□□□ -0.5
SHANK2-210ENST00000449116 TUSC2O75896 110 aa11.94□□□□□ -0.5
SHANK2-210ENST00000449116 AVPP01185 164 aa11.94□□□□□ -0.5
SHANK2-210ENST00000449116 IGHV3-7P01780 117 aa11.94□□□□□ -0.5
SHANK2-210ENST00000449116 AMY2AP04746 511 aa11.94□□□□□ -0.5
SHANK2-210ENST00000449116 ZNF735P0CB33 412 aa11.94□□□□□ -0.5
SHANK2-210ENST00000449116 GNG10P50151 68 aa11.94□□□□□ -0.5
SHANK2-210ENST00000449116 IFITM3Q01628 133 aa11.94□□□□□ -0.5
SHANK2-210ENST00000449116 KLRD1Q13241 179 aa11.94□□□□□ -0.5
SHANK2-210ENST00000449116 ZNF660Q6AZW8 331 aaPredicted RBP11.94□□□□□ -0.5
SHANK2-210ENST00000449116 TMEM17Q86X19 198 aa11.94□□□□□ -0.5
SHANK2-210ENST00000449116 PNKDQ8N490 385 aa11.94□□□□□ -0.5
SHANK2-210ENST00000449116 ZNF439Q8NDP4 499 aa11.94□□□□□ -0.5
SHANK2-210ENST00000449116 OR11H6Q8NGC7 330 aa11.94□□□□□ -0.5
SHANK2-210ENST00000449116 OR56B4Q8NH76 319 aa11.94□□□□□ -0.5
SHANK2-210ENST00000449116 LHX4Q969G2 390 aa11.94□□□□□ -0.5
SHANK2-210ENST00000449116 ZNF2Q9BSG1 426 aaPredicted RBP11.94□□□□□ -0.5
SHANK2-210ENST00000449116 ABHD14AQ9BUJ0 271 aa11.94□□□□□ -0.5
SHANK2-210ENST00000449116 PARP12Q9H0J9 701 aaKnown RBP11.94□□□□□ -0.5
SHANK2-210ENST00000449116 MCUBQ9NWR8 336 aa11.94□□□□□ -0.5
SHANK2-210ENST00000449116 OR2W1Q9Y3N9 320 aa11.94□□□□□ -0.5
SHANK2-210ENST00000449116 NAP1L6A6NFF2 107 aa11.93□□□□□ -0.5
SHANK2-210ENST00000449116 CENPXA8MT69 81 aa11.93□□□□□ -0.5
SHANK2-210ENST00000449116 J3QR06 171 aa11.93□□□□□ -0.5
SHANK2-210ENST00000449116 TOR1AO14656 332 aa11.93□□□□□ -0.5
SHANK2-210ENST00000449116 PPYP01298 95 aa11.93□□□□□ -0.5
SHANK2-210ENST00000449116 AADACP22760 399 aa11.93□□□□□ -0.5
SHANK2-210ENST00000449116 RAB7AP51149 207 aa11.93□□□□□ -0.5
SHANK2-210ENST00000449116 UBE2E1P51965 193 aa11.93□□□□□ -0.5
SHANK2-210ENST00000449116 ZNF134P52741 427 aa11.93□□□□□ -0.5
SHANK2-210ENST00000449116 PRRX1P54821 245 aa11.93□□□□□ -0.5
SHANK2-210ENST00000449116 ZNF626Q68DY1 528 aa11.93□□□□□ -0.5
SHANK2-210ENST00000449116 SLC25A48Q6ZT89 311 aaKnown RBP11.93□□□□□ -0.5
SHANK2-210ENST00000449116 PDZD9Q8IXQ8 264 aa11.93□□□□□ -0.5
SHANK2-210ENST00000449116 LINC00311Q8N616 119 aa11.93□□□□□ -0.5
SHANK2-210ENST00000449116 BEND2Q8NDZ0 799 aa11.93□□□□□ -0.5
SHANK2-210ENST00000449116 ZNF596Q8TC21 504 aa11.93□□□□□ -0.5
SHANK2-210ENST00000449116 FAM216AQ8WUB2 273 aa11.93□□□□□ -0.5
SHANK2-210ENST00000449116 SLC6A7Q99884 636 aa11.93□□□□□ -0.5
SHANK2-210ENST00000449116 PRRT1Q99946 306 aa11.93□□□□□ -0.5
SHANK2-210ENST00000449116 C11orf54Q9H0W9 315 aaPredicted RBP11.93□□□□□ -0.5
SHANK2-210ENST00000449116 PALMDQ9NP74 551 aa11.93□□□□□ -0.5
SHANK2-210ENST00000449116 CSPG4Q6UVK1 2322 aa11.93□□□□□ -0.5
SHANK2-210ENST00000449116 ACANP16112 2415 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 TRAV40A0A0B4J280 105 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 CENPVL3A0A0U1RRI6 287 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 A0A1W2PPE3 182 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 ODF3BA8MYP8 253 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 SLC31A2O15432 143 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 ST8SIA5O15466 376 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 PLA2G10O15496 165 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 LYRM1O43325 122 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 IGLV1-47P01700 117 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 ARG1P05089 322 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 HERV-K104P61576 105 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 HLA-DRB5Q30154 266 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 SCGB2B2Q4G0G5 96 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 CT45A1Q5HYN5 189 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 GPR157Q5UAW9 335 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 C1orf229Q6ZS94 237 aaPredicted RBP11.92□□□□□ -0.5
SHANK2-210ENST00000449116 LHFPL1Q86WI0 220 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 TEX29Q8N6K0 151 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 OR51S1Q8NGJ8 323 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 CT45A3Q8NHU0 189 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 MOB3AQ96BX8 217 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 SMR3AQ99954 134 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 MMP28Q9H239 520 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 YAE1D1Q9NRH1 226 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 SLC2A8Q9NY64 477 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 SCP2D1Q9UJQ7 156 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 RBM7Q9Y580 266 aaKnown RBP11.92□□□□□ -0.5
SHANK2-210ENST00000449116 SVEP1Q4LDE5 3571 aa11.92□□□□□ -0.5
SHANK2-210ENST00000449116 A8MV72 311 aaPredicted RBP11.91□□□□□ -0.5
SHANK2-210ENST00000449116 LY6G6DO95868 133 aa11.91□□□□□ -0.5
SHANK2-210ENST00000449116 OR8U9P0C7N5 309 aa11.91□□□□□ -0.5
SHANK2-210ENST00000449116 LUMP51884 338 aaPredicted RBP11.91□□□□□ -0.5
SHANK2-210ENST00000449116 FXYD4P59646 89 aa11.91□□□□□ -0.5
SHANK2-210ENST00000449116 ASAH1Q13510 395 aa11.91□□□□□ -0.5
SHANK2-210ENST00000449116 DCTN2Q13561 401 aaKnown RBP11.91□□□□□ -0.5
SHANK2-210ENST00000449116 OR4P4Q8NGL7 312 aa11.91□□□□□ -0.5
SHANK2-210ENST00000449116 OR10X1Q8NGY0 326 aa11.91□□□□□ -0.5
SHANK2-210ENST00000449116 OR8U1Q8NH10 309 aa11.91□□□□□ -0.5
SHANK2-210ENST00000449116 AGMATQ9BSE5 352 aa11.91□□□□□ -0.5
SHANK2-210ENST00000449116 IFI27L2Q9H2X8 130 aa11.91□□□□□ -0.5
SHANK2-210ENST00000449116 TBC1D24Q9ULP9 559 aa11.91□□□□□ -0.5
SHANK2-210ENST00000449116 ZANQ9Y493 2812 aa11.91□□□□□ -0.5
SHANK2-210ENST00000449116 IGHV3OR16-10A0A075B7F0 116 aa11.9□□□□□ -0.5
SHANK2-210ENST00000449116 IGKV1D-13A0A0B4J2D9 117 aa11.9□□□□□ -0.5
SHANK2-210ENST00000449116 IGHV1-69DA0A0B4J2H0 117 aa11.9□□□□□ -0.5
SHANK2-210ENST00000449116 OR5H14A6NHG9 310 aa11.9□□□□□ -0.5
SHANK2-210ENST00000449116 IGHV1-69P01742 117 aa11.9□□□□□ -0.5
SHANK2-210ENST00000449116 IGHV4-38-2P0DP08 117 aa11.9□□□□□ -0.5
SHANK2-210ENST00000449116 IGKV1-13P0DP09 117 aa11.9□□□□□ -0.5
SHANK2-210ENST00000449116 DEFA1P59665 94 aa11.9□□□□□ -0.5
SHANK2-210ENST00000449116 DEFA3P59666 94 aa11.9□□□□□ -0.5
SHANK2-210ENST00000449116 MIDNQ504T8 468 aa11.9□□□□□ -0.5
SHANK2-210ENST00000449116 KLF17Q5JT82 389 aaPredicted RBP11.9□□□□□ -0.5
SHANK2-210ENST00000449116 AADACL3Q5VUY0 350 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms