RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 IGHV3-43A0A0B4J1X8 118 aa14.56□□□□□ -0.08
SMC6-206ENST00000446852 SSSCA1O60232 199 aa14.56□□□□□ -0.08
SMC6-206ENST00000446852 IGHV3-43DP0DP04 118 aa14.56□□□□□ -0.08
SMC6-206ENST00000446852 ZNF16P17020 682 aaPredicted RBP14.56□□□□□ -0.08
SMC6-206ENST00000446852 NHLH2Q02577 135 aa14.56□□□□□ -0.08
SMC6-206ENST00000446852 ADIPOQQ15848 244 aa14.56□□□□□ -0.08
SMC6-206ENST00000446852 OR1S2Q8NGQ3 325 aa14.56□□□□□ -0.08
SMC6-206ENST00000446852 GPR146Q96CH1 333 aa14.56□□□□□ -0.08
SMC6-206ENST00000446852 VKORC1Q9BQB6 163 aa14.56□□□□□ -0.08
SMC6-206ENST00000446852 WFDC1Q9HC57 220 aa14.56□□□□□ -0.08
SMC6-206ENST00000446852 LIN7CQ9NUP9 197 aaKnown RBP14.56□□□□□ -0.08
SMC6-206ENST00000446852 A0A1B0GW55 424 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 SHOXO15266 292 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 DUX4L2P0CJ85 424 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 DUX4L3P0CJ86 424 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 DUX4L4P0CJ87 422 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 DUX4L5P0CJ88 424 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 DUX4L6P0CJ89 424 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 DUX4L7P0CJ90 424 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 EPHA1P21709 976 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 ID3Q02535 119 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 TGIF2LYQ8IUE0 185 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 RNF141Q8WVD5 230 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 SNX22Q96L94 193 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 DUX4Q9UBX2 424 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 ODAMA1E959 279 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 JTBO76095 146 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 SELLP14151 372 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 Q6ZRM9 215 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 FAM222BQ8WU58 562 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 NINJ1Q92982 152 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 WFIKKN1Q96NZ8 548 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 RNF7Q9UBF6 113 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 SESN1Q9Y6P5 492 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 PKDREJQ9NTG1 2253 aa14.55□□□□□ -0.08
SMC6-206ENST00000446852 TRGV8A0A0C4DH27 118 aa14.54□□□□□ -0.08
SMC6-206ENST00000446852 K7N7A8 449 aa14.54□□□□□ -0.08
SMC6-206ENST00000446852 MGST3O14880 152 aa14.54□□□□□ -0.08
SMC6-206ENST00000446852 PITX3O75364 302 aa14.54□□□□□ -0.08
SMC6-206ENST00000446852 TMEM50AO95807 157 aa14.54□□□□□ -0.08
SMC6-206ENST00000446852 IGKV1-5P01602 117 aa14.54□□□□□ -0.08
SMC6-206ENST00000446852 OR4A8P0C604 315 aa14.54□□□□□ -0.08
SMC6-206ENST00000446852 ZP3P21754 424 aa14.54□□□□□ -0.08
SMC6-206ENST00000446852 EIF5AP63241 154 aaKnown RBP14.54□□□□□ -0.08
SMC6-206ENST00000446852 EIF4EBP1Q13541 118 aaPredicted RBP14.54□□□□□ -0.08
SMC6-206ENST00000446852 ADAM5Q6NVV9 412 aa14.54□□□□□ -0.08
SMC6-206ENST00000446852 ABHD14BQ96IU4 210 aa14.54□□□□□ -0.08
SMC6-206ENST00000446852 PLEKHF2Q9H8W4 249 aa14.54□□□□□ -0.08
SMC6-206ENST00000446852 FAM24AA6NFZ4 105 aa14.54□□□□□ -0.08
SMC6-206ENST00000446852 CYB5R3P00387 301 aaPredicted RBP14.54□□□□□ -0.08
SMC6-206ENST00000446852 EWSR1Q01844 656 aaKnown RBP eCLIP14.54□□□□□ -0.08
SMC6-206ENST00000446852 ZNF808Q8N4W9 903 aaPredicted RBP14.54□□□□□ -0.08
SMC6-206ENST00000446852 OR2C3Q8N628 320 aa14.54□□□□□ -0.08
SMC6-206ENST00000446852 UBAC2Q8NBM4 344 aa14.54□□□□□ -0.08
SMC6-206ENST00000446852 LRRC20Q8TCA0 184 aa14.54□□□□□ -0.08
SMC6-206ENST00000446852 PLA2G2EQ9NZK7 142 aa14.54□□□□□ -0.08
SMC6-206ENST00000446852 IGSF23A1L1A6 192 aa14.53□□□□□ -0.08
SMC6-206ENST00000446852 DEFB108AA8MXU0 73 aa14.53□□□□□ -0.08
SMC6-206ENST00000446852 RPL30P62888 115 aaKnown RBP14.53□□□□□ -0.08
SMC6-206ENST00000446852 DUX4L9Q6RFH8 374 aaPredicted RBP14.53□□□□□ -0.08
SMC6-206ENST00000446852 DCAF16Q9NXF7 216 aa14.53□□□□□ -0.08
SMC6-206ENST00000446852 TAS2R3Q9NYW6 316 aa14.53□□□□□ -0.08
SMC6-206ENST00000446852 LPAR3Q9UBY5 353 aa14.53□□□□□ -0.08
SMC6-206ENST00000446852 RNF115Q9Y4L5 304 aa14.53□□□□□ -0.08
SMC6-206ENST00000446852 A0A1B0GU03 582 aa14.53□□□□□ -0.08
SMC6-206ENST00000446852 SPINT2O43291 252 aa14.53□□□□□ -0.08
SMC6-206ENST00000446852 FBXO24O75426 580 aa14.53□□□□□ -0.08
SMC6-206ENST00000446852 TNFSF4P23510 183 aa14.53□□□□□ -0.08
SMC6-206ENST00000446852 CAV2P51636 162 aa14.53□□□□□ -0.08
SMC6-206ENST00000446852 TRAT1Q6PIZ9 186 aa14.53□□□□□ -0.08
SMC6-206ENST00000446852 LSM10Q969L4 123 aaKnown RBP14.53□□□□□ -0.08
SMC6-206ENST00000446852 LYRM2Q9NU23 88 aaPredicted RBP14.53□□□□□ -0.08
SMC6-206ENST00000446852 ITPR1Q14643 2758 aa14.53□□□□□ -0.08
SMC6-206ENST00000446852 KIAA1324LA8MWY0 1029 aaPredicted RBP14.52□□□□□ -0.08
SMC6-206ENST00000446852 RAMP3O60896 148 aa14.52□□□□□ -0.08
SMC6-206ENST00000446852 SLC25A6P12236 298 aa14.52□□□□□ -0.08
SMC6-206ENST00000446852 PVALBP20472 110 aaPredicted RBP14.52□□□□□ -0.08
SMC6-206ENST00000446852 ASCL1P50553 236 aa14.52□□□□□ -0.08
SMC6-206ENST00000446852 CCL8P80075 99 aa14.52□□□□□ -0.08
SMC6-206ENST00000446852 HTD2P86397 168 aa14.52□□□□□ -0.08
SMC6-206ENST00000446852 LTC4SQ16873 150 aa14.52□□□□□ -0.08
SMC6-206ENST00000446852 STUMQ69YW2 141 aa14.52□□□□□ -0.08
SMC6-206ENST00000446852 ODF3L1Q8IXM7 274 aa14.52□□□□□ -0.08
SMC6-206ENST00000446852 ZCCHC24Q8N2G6 241 aaKnown RBP14.52□□□□□ -0.08
SMC6-206ENST00000446852 RNASE11Q8TAA1 199 aaKnown RBP14.52□□□□□ -0.08
SMC6-206ENST00000446852 PPP1R35Q8TAP8 253 aa14.52□□□□□ -0.08
SMC6-206ENST00000446852 Q8TCH9 128 aa14.52□□□□□ -0.08
SMC6-206ENST00000446852 ARV1Q9H2C2 271 aa14.52□□□□□ -0.08
SMC6-206ENST00000446852 NBASA2RRP1 2371 aa14.52□□□□□ -0.08
SMC6-206ENST00000446852 RNF212BA8MTL3 300 aa14.52□□□□□ -0.09
SMC6-206ENST00000446852 ZNF705EA8MWA4 302 aaPredicted RBP14.52□□□□□ -0.09
SMC6-206ENST00000446852 AKR1C2P52895 323 aa14.52□□□□□ -0.09
SMC6-206ENST00000446852 EDDM3BP56851 147 aa14.52□□□□□ -0.09
SMC6-206ENST00000446852 MST1LQ2TV78 715 aa14.52□□□□□ -0.09
SMC6-206ENST00000446852 CR1LQ2VPA4 569 aa14.52□□□□□ -0.09
SMC6-206ENST00000446852 BTNL3Q6UXE8 466 aa14.52□□□□□ -0.09
SMC6-206ENST00000446852 ZBTB34Q8NCN2 500 aa14.52□□□□□ -0.09
SMC6-206ENST00000446852 AGMATQ9BSE5 352 aa14.52□□□□□ -0.09
SMC6-206ENST00000446852 CACNG5Q9UF02 275 aa14.52□□□□□ -0.09
SMC6-206ENST00000446852 PIGBOS1A0A0B4J2F0 54 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms