RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 ABCA11PQ4W5N1 156 aa11.17□□□□□ -0.62
TREX1-202ENST00000444177 SAMD5Q5TGI4 173 aa11.17□□□□□ -0.62
TREX1-202ENST00000444177 C5orf24Q7Z6I8 188 aa11.17□□□□□ -0.62
TREX1-202ENST00000444177 MOB3BQ86TA1 216 aa11.17□□□□□ -0.62
TREX1-202ENST00000444177 ZNF554Q86TJ5 538 aa11.17□□□□□ -0.62
TREX1-202ENST00000444177 LINC00311Q8N616 119 aa11.17□□□□□ -0.62
TREX1-202ENST00000444177 C8orf31Q8N9H6 132 aa11.17□□□□□ -0.62
TREX1-202ENST00000444177 ZNF439Q8NDP4 499 aa11.17□□□□□ -0.62
TREX1-202ENST00000444177 OR52L2PQ8NGH6 319 aa11.17□□□□□ -0.62
TREX1-202ENST00000444177 CITED2Q99967 270 aaPredicted RBP11.17□□□□□ -0.62
TREX1-202ENST00000444177 OR2S2Q9NQN1 319 aa11.17□□□□□ -0.62
TREX1-202ENST00000444177 JPT1Q9UK76 154 aa11.17□□□□□ -0.62
TREX1-202ENST00000444177 MOB4Q9Y3A3 225 aa11.17□□□□□ -0.62
TREX1-202ENST00000444177 IGHV3-72A0A0B4J1Y9 119 aa11.16□□□□□ -0.62
TREX1-202ENST00000444177 IGHV1-3A0A0C4DH29 117 aa11.16□□□□□ -0.62
TREX1-202ENST00000444177 TMEM272A0A1B0GTI8 110 aa11.16□□□□□ -0.62
TREX1-202ENST00000444177 IGKV1D-33P01593 117 aa11.16□□□□□ -0.62
TREX1-202ENST00000444177 IGKV1-33P01594 117 aa11.16□□□□□ -0.62
TREX1-202ENST00000444177 LPLP06858 475 aa11.16□□□□□ -0.62
TREX1-202ENST00000444177 LSM3P62310 102 aaKnown RBP11.16□□□□□ -0.62
TREX1-202ENST00000444177 MXD1Q05195 221 aa11.16□□□□□ -0.62
TREX1-202ENST00000444177 HMGN3Q15651 99 aa11.16□□□□□ -0.62
TREX1-202ENST00000444177 C9orf152Q5JTZ5 239 aa11.16□□□□□ -0.62
TREX1-202ENST00000444177 KPRPQ5T749 579 aaPredicted RBP11.16□□□□□ -0.62
TREX1-202ENST00000444177 GPR107Q5VW38 600 aa11.16□□□□□ -0.62
TREX1-202ENST00000444177 SLC25A48Q6ZT89 311 aaKnown RBP11.16□□□□□ -0.62
TREX1-202ENST00000444177 NDUFA11Q86Y39 141 aa11.16□□□□□ -0.62
TREX1-202ENST00000444177 OR56B1Q8NGI3 324 aa11.16□□□□□ -0.62
TREX1-202ENST00000444177 GALMQ96C23 342 aa11.16□□□□□ -0.62
TREX1-202ENST00000444177 HDHD3Q9BSH5 251 aaPredicted RBP11.16□□□□□ -0.62
TREX1-202ENST00000444177 ABRACLQ9P1F3 81 aa11.16□□□□□ -0.62
TREX1-202ENST00000444177 AK3Q9UIJ7 227 aa11.16□□□□□ -0.62
TREX1-202ENST00000444177 DAPK2Q9UIK4 370 aa11.16□□□□□ -0.62
TREX1-202ENST00000444177 HSF4Q9ULV5 492 aa11.16□□□□□ -0.62
TREX1-202ENST00000444177 ETV7Q9Y603 341 aa11.16□□□□□ -0.62
TREX1-202ENST00000444177 FAM90A9PA6NNJ1 464 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 FOXI3A8MTJ6 420 aaPredicted RBP11.15□□□□□ -0.62
TREX1-202ENST00000444177 ADARB2-AS1A8MUL3 147 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 SCGNO76038 276 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 CLEC2LP0C7M8 214 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 SLC2A2P11168 524 aaPredicted RBP11.15□□□□□ -0.62
TREX1-202ENST00000444177 PPP1CCP36873 323 aaKnown RBP11.15□□□□□ -0.62
TREX1-202ENST00000444177 RPS19P39019 145 aaKnown RBP11.15□□□□□ -0.62
TREX1-202ENST00000444177 TMBIM6P55061 237 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 NCS1P62166 190 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 PLA2G7Q13093 441 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 HNF4GQ14541 408 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 CT45A1Q5HYN5 189 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 MOB1BQ7L9L4 216 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 THNSL2Q86YJ6 484 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 TGIF2LXQ8IUE1 241 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 OR4F17Q8NGA8 305 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 CT45A3Q8NHU0 189 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 RAB2BQ8WUD1 216 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 RTN4IP1Q8WWV3 396 aaPredicted RBP11.15□□□□□ -0.62
TREX1-202ENST00000444177 IL1F10Q8WWZ1 152 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 SLC25A46Q96AG3 418 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 KCTD12Q96CX2 325 aaKnown RBP11.15□□□□□ -0.62
TREX1-202ENST00000444177 R3HDM4Q96D70 268 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 ARHGAP5-AS1Q96IT6 56 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 OR4F4Q96R69 305 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 ABHD14AQ9BUJ0 271 aa11.15□□□□□ -0.62
TREX1-202ENST00000444177 A0A0B4J203 849 aa11.14□□□□□ -0.63
TREX1-202ENST00000444177 METTL21EPA6NDL7 271 aa11.14□□□□□ -0.63
TREX1-202ENST00000444177 M0QZK8 103 aa11.14□□□□□ -0.63
TREX1-202ENST00000444177 TXNL1O43396 289 aa11.14□□□□□ -0.63
TREX1-202ENST00000444177 RGS11O94810 467 aa11.14□□□□□ -0.63
TREX1-202ENST00000444177 NAPSAO96009 420 aa11.14□□□□□ -0.63
TREX1-202ENST00000444177 TGFBR1P36897 503 aa11.14□□□□□ -0.63
TREX1-202ENST00000444177 SERPINB10P48595 397 aa11.14□□□□□ -0.63
TREX1-202ENST00000444177 ZNF134P52741 427 aa11.14□□□□□ -0.63
TREX1-202ENST00000444177 VBP1P61758 197 aa11.14□□□□□ -0.63
TREX1-202ENST00000444177 HTD2P86397 168 aa11.14□□□□□ -0.63
TREX1-202ENST00000444177 MORN2Q502X0 79 aa11.14□□□□□ -0.63
TREX1-202ENST00000444177 Q6ZPA2 131 aa11.14□□□□□ -0.63
TREX1-202ENST00000444177 IZUMO1Q8IYV9 350 aa11.14□□□□□ -0.63
TREX1-202ENST00000444177 OR5AU1Q8NGC0 362 aa11.14□□□□□ -0.63
TREX1-202ENST00000444177 CMSS1Q9BQ75 279 aaKnown RBP11.14□□□□□ -0.63
TREX1-202ENST00000444177 PECRQ9BY49 303 aa11.14□□□□□ -0.63
TREX1-202ENST00000444177 C12orf4Q9NQ89 552 aa11.14□□□□□ -0.63
TREX1-202ENST00000444177 YPEL1O60688 119 aa11.13□□□□□ -0.63
TREX1-202ENST00000444177 PRB2P02812 416 aaPredicted RBP11.13□□□□□ -0.63
TREX1-202ENST00000444177 AMY1AP04745 511 aa11.13□□□□□ -0.63
TREX1-202ENST00000444177 AMY2AP04746 511 aa11.13□□□□□ -0.63
TREX1-202ENST00000444177 ZNF137PP52743 207 aa11.13□□□□□ -0.63
TREX1-202ENST00000444177 TMEM50BP56557 158 aa11.13□□□□□ -0.63
TREX1-202ENST00000444177 HLA-DRB3P79483 266 aa11.13□□□□□ -0.63
TREX1-202ENST00000444177 MRPS15P82914 257 aaKnown RBP11.13□□□□□ -0.63
TREX1-202ENST00000444177 CD83Q01151 205 aa11.13□□□□□ -0.63
TREX1-202ENST00000444177 ARL6IP1Q15041 203 aa11.13□□□□□ -0.63
TREX1-202ENST00000444177 OXLD1Q5BKU9 147 aa11.13□□□□□ -0.63
TREX1-202ENST00000444177 ZNF880Q6PDB4 577 aa11.13□□□□□ -0.63
TREX1-202ENST00000444177 CENPVQ7Z7K6 275 aaPredicted RBP11.13□□□□□ -0.63
TREX1-202ENST00000444177 CLVS1Q8IUQ0 354 aaPredicted RBP11.13□□□□□ -0.63
TREX1-202ENST00000444177 C5orf56Q8N8D9 126 aa11.13□□□□□ -0.63
TREX1-202ENST00000444177 ST6GALNAC6Q969X2 333 aa11.13□□□□□ -0.63
TREX1-202ENST00000444177 YPEL2Q96QA6 119 aa11.13□□□□□ -0.63
TREX1-202ENST00000444177 NAA50Q9GZZ1 169 aaKnown RBP11.13□□□□□ -0.63
TREX1-202ENST00000444177 RIMS4Q9H426 269 aaPredicted RBP11.13□□□□□ -0.63
TREX1-202ENST00000444177 SPATA2Q9UM82 520 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms