RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 C1orf174Q8IYL3 243 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 INSL6Q9Y581 213 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 XIRP1Q702N8 1843 aaKnown RBP4.33□□□□□ -1.72
HERC1-201ENST00000443617 PLXND1Q9Y4D7 1925 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 C7orf61Q8IZ16 206 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 GPR146Q96CH1 333 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 WDYHV1Q96HA8 205 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 GPR27Q9NS67 375 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 IL19Q9UHD0 177 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 PDLIM3Q53GG5 364 aaPredicted RBP4.33□□□□□ -1.72
HERC1-201ENST00000443617 Q56UQ5 140 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 ZNF775Q96BV0 537 aaPredicted RBP4.33□□□□□ -1.72
HERC1-201ENST00000443617 HYPMO75409 117 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 MGST1P10620 155 aaKnown RBP4.33□□□□□ -1.72
HERC1-201ENST00000443617 GNG4P50150 75 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 CLDN17P56750 224 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 MESP2Q0VG99 397 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 ZNF525Q8N782 197 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 CADM4Q8NFZ8 388 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 WDR61Q9GZS3 305 aaKnown RBP4.33□□□□□ -1.72
HERC1-201ENST00000443617 GZMHP20718 246 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 FBLP22087 321 aaKnown RBP4.33□□□□□ -1.72
HERC1-201ENST00000443617 TSPOP30536 169 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 RAC1P63000 192 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 LYG1Q8N1E2 194 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 PIGCQ92535 297 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 SMIM12Q96EX1 92 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 GCM1Q9NP62 436 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 GPM6AP51674 278 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 GTF2H5Q6ZYL4 71 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 FLVCR1-AS1Q8TAF5 88 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 KCNIP1Q9NZI2 227 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 SYNGR2O43760 224 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 TMEM50AO95807 157 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 IGLV3-21P80748 117 aaPredicted RBP4.32□□□□□ -1.72
HERC1-201ENST00000443617 HLA-BQ31612 363 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 TAF15Q92804 592 aaKnown RBP eCLIP4.32□□□□□ -1.72
HERC1-201ENST00000443617 ZNF703Q9H7S9 590 aaPredicted RBP4.32□□□□□ -1.72
HERC1-201ENST00000443617 ZNF331Q9NQX6 463 aaPredicted RBP4.32□□□□□ -1.72
HERC1-201ENST00000443617 CCL28Q9NRJ3 127 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 AARDQ4LEZ3 155 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 MRPL18Q9H0U6 180 aaKnown RBP4.32□□□□□ -1.72
HERC1-201ENST00000443617 B4DGG1 531 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 PPP1CAP62136 330 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 C12orf54Q6X4T0 127 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 EFEMP2O95967 443 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 HIST3H3Q16695 136 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 OR6C1Q96RD1 312 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 RASL10BQ96S79 203 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 A0A0U1RQV5 110 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 RIPPLY3P57055 190 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 FOXL1Q12952 345 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 TPTE2P1Q5T6R2 138 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 MKXQ8IYA7 352 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 KCNK17Q96T54 332 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 DPRXA6NFQ7 191 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 CTGFP29279 349 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 BCL2L2Q92843 193 aaPredicted RBP4.32□□□□□ -1.72
HERC1-201ENST00000443617 C1orf147Q96MC9 270 aaPredicted RBP4.32□□□□□ -1.72
HERC1-201ENST00000443617 ENY2Q9NPA8 101 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.32□□□□□ -1.72
HERC1-201ENST00000443617 MTCH1Q9NZJ7 389 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 TRIM61Q5EBN2 209 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 C12orf76Q8N812 135 aaPredicted RBP4.32□□□□□ -1.72
HERC1-201ENST00000443617 CXCL10P02778 98 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 POU2F2P09086 479 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 OR52L2PQ8NGH6 319 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 OR10V1Q8NGI7 309 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 PARLQ9H300 379 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 VSIRQ9H7M9 311 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 SPG11Q96JI7 2443 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 TRBV9A0A0B4J1U6 114 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 SLC22A20A6NK97 555 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 TGFBR3LH3BV60 316 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 HSPB6O14558 160 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 OR7C2O60412 319 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 HHEXQ03014 270 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 EXT1Q16394 746 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 NMSQ5H8A3 153 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 RNASEKQ6P5S7 137 aaKnown RBP4.32□□□□□ -1.72
HERC1-201ENST00000443617 WDFY1Q8IWB7 410 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 PLEK2Q9NYT0 353 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 SH3BGRL2Q9UJC5 107 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 IGHV1-69-2A0A0G2JMI3 117 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 NPBWR2P48146 333 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 TCF23Q7RTU1 214 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 GATAD1Q8WUU5 269 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 KCNIP2Q9NS61 270 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 CTSBP07858 339 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 UNQ5815/PRO19632Q6UWF5 114 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 SHISA5Q8N114 240 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 FOXS1O43638 330 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 NUPR1O60356 82 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 CEACAM8P31997 349 aaPredicted RBP4.32□□□□□ -1.72
HERC1-201ENST00000443617 FASLGP48023 281 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 ZNF818PQ6ZRF7 136 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 TIMM9Q9Y5J7 89 aa4.32□□□□□ -1.72
HERC1-201ENST00000443617 PRRX1P54821 245 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 KLHDC3Q9BQ90 382 aa4.31□□□□□ -1.72
HERC1-201ENST00000443617 GLB1P16278 677 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms