RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 COL6A5A8TX70 2615 aa12.91□□□□□ -0.34
USP39-205ENST00000442708 DPPA5A6NC42 116 aa12.9□□□□□ -0.34
USP39-205ENST00000442708 TRIM77I1YAP6 450 aa12.9□□□□□ -0.34
USP39-205ENST00000442708 SOX6P35712 828 aa12.9□□□□□ -0.34
USP39-205ENST00000442708 PITPNAQ00169 270 aa12.9□□□□□ -0.34
USP39-205ENST00000442708 AANATQ16613 207 aa12.9□□□□□ -0.34
USP39-205ENST00000442708 LY6G6FQ5SQ64 297 aa12.9□□□□□ -0.34
USP39-205ENST00000442708 FOXB2Q5VYV0 432 aa12.9□□□□□ -0.34
USP39-205ENST00000442708 STEAP3Q658P3 488 aa12.9□□□□□ -0.34
USP39-205ENST00000442708 CCBE1Q6UXH8 406 aaPredicted RBP12.9□□□□□ -0.34
USP39-205ENST00000442708 ODF3L1Q8IXM7 274 aa12.9□□□□□ -0.34
USP39-205ENST00000442708 OR4A4PQ8NGN8 299 aa12.9□□□□□ -0.34
USP39-205ENST00000442708 OR10X1Q8NGY0 326 aa12.9□□□□□ -0.34
USP39-205ENST00000442708 FAM216AQ8WUB2 273 aa12.9□□□□□ -0.34
USP39-205ENST00000442708 CABLES2Q9BTV7 478 aa12.9□□□□□ -0.34
USP39-205ENST00000442708 DPAGT1Q9H3H5 408 aa12.9□□□□□ -0.34
USP39-205ENST00000442708 AMMECR1Q9Y4X0 333 aaPredicted RBP12.9□□□□□ -0.34
USP39-205ENST00000442708 A0A1W2PPI3 338 aa12.89□□□□□ -0.35
USP39-205ENST00000442708 MEIS3P1A6NDR6 274 aa12.89□□□□□ -0.35
USP39-205ENST00000442708 FAM25AB3EWG3 89 aa12.89□□□□□ -0.35
USP39-205ENST00000442708 FAM25CB3EWG5 89 aa12.89□□□□□ -0.35
USP39-205ENST00000442708 FAM25GB3EWG6 89 aa12.89□□□□□ -0.35
USP39-205ENST00000442708 ZNF701M0R085 212 aaPredicted RBP12.89□□□□□ -0.35
USP39-205ENST00000442708 FCER2P06734 321 aa12.89□□□□□ -0.35
USP39-205ENST00000442708 CD24P25063 80 aa12.89□□□□□ -0.35
USP39-205ENST00000442708 CEACAM3P40198 252 aa12.89□□□□□ -0.35
USP39-205ENST00000442708 CEACAM6P40199 344 aa12.89□□□□□ -0.35
USP39-205ENST00000442708 REG1BP48304 166 aa12.89□□□□□ -0.35
USP39-205ENST00000442708 LY6EQ16553 131 aa12.89□□□□□ -0.35
USP39-205ENST00000442708 C16orf87Q6PH81 154 aa12.89□□□□□ -0.35
USP39-205ENST00000442708 LAX1Q8IWV1 398 aa12.89□□□□□ -0.35
USP39-205ENST00000442708 ZFAND2BQ8WV99 257 aa12.89□□□□□ -0.35
USP39-205ENST00000442708 TOMM40LQ969M1 308 aa12.89□□□□□ -0.35
USP39-205ENST00000442708 CREB3L1Q96BA8 519 aa12.89□□□□□ -0.35
USP39-205ENST00000442708 RBMXL1Q96E39 390 aaKnown RBP12.89□□□□□ -0.35
USP39-205ENST00000442708 DCUN1D5Q9BTE7 237 aa12.89□□□□□ -0.35
USP39-205ENST00000442708 ABHD14AQ9BUJ0 271 aa12.89□□□□□ -0.35
USP39-205ENST00000442708 VPREB3Q9UKI3 123 aa12.89□□□□□ -0.35
USP39-205ENST00000442708 TRBV6-7A0A0A0MS04 114 aa12.88□□□□□ -0.35
USP39-205ENST00000442708 FAM181BA6NEQ2 426 aa12.88□□□□□ -0.35
USP39-205ENST00000442708 BET1O15155 118 aa12.88□□□□□ -0.35
USP39-205ENST00000442708 ST8SIA5O15466 376 aa12.88□□□□□ -0.35
USP39-205ENST00000442708 GPR137BO60478 399 aa12.88□□□□□ -0.35
USP39-205ENST00000442708 ZBTB25P24278 435 aa12.88□□□□□ -0.35
USP39-205ENST00000442708 MNDAP41218 407 aa12.88□□□□□ -0.35
USP39-205ENST00000442708 KIR2DS4P43632 304 aa12.88□□□□□ -0.35
USP39-205ENST00000442708 DYNLT3P51808 116 aa12.88□□□□□ -0.35
USP39-205ENST00000442708 ZNF137PP52743 207 aa12.88□□□□□ -0.35
USP39-205ENST00000442708 KIR2DS1Q14954 304 aa12.88□□□□□ -0.35
USP39-205ENST00000442708 HOGA1Q86XE5 327 aa12.88□□□□□ -0.35
USP39-205ENST00000442708 OR5R1Q8NH85 324 aa12.88□□□□□ -0.35
USP39-205ENST00000442708 CFHR4Q92496 578 aa12.88□□□□□ -0.35
USP39-205ENST00000442708 RPEQ96AT9 228 aa12.88□□□□□ -0.35
USP39-205ENST00000442708 AGMATQ9BSE5 352 aa12.88□□□□□ -0.35
USP39-205ENST00000442708 C19orf24Q9BVV8 132 aa12.88□□□□□ -0.35
USP39-205ENST00000442708 NXF2Q9GZY0 626 aaKnown RBP12.88□□□□□ -0.35
USP39-205ENST00000442708 TOLLIPQ9H0E2 274 aa12.88□□□□□ -0.35
USP39-205ENST00000442708 C11orf54Q9H0W9 315 aaPredicted RBP12.88□□□□□ -0.35
USP39-205ENST00000442708 IFI27L2Q9H2X8 130 aa12.88□□□□□ -0.35
USP39-205ENST00000442708 MRPS7Q9Y2R9 242 aaKnown RBP12.88□□□□□ -0.35
USP39-205ENST00000442708 TENM1Q9UKZ4 2725 aa12.88□□□□□ -0.35
USP39-205ENST00000442708 A6NDX4 124 aa12.87□□□□□ -0.35
USP39-205ENST00000442708 RNF212BA8MTL3 300 aa12.87□□□□□ -0.35
USP39-205ENST00000442708 OOSP1A8MZH6 123 aa12.87□□□□□ -0.35
USP39-205ENST00000442708 HSD17B6O14756 317 aa12.87□□□□□ -0.35
USP39-205ENST00000442708 TIMM23O14925 209 aa12.87□□□□□ -0.35
USP39-205ENST00000442708 RGS5O15539 181 aa12.87□□□□□ -0.35
USP39-205ENST00000442708 HSPA12AO43301 675 aa12.87□□□□□ -0.35
USP39-205ENST00000442708 CHST1O43916 411 aa12.87□□□□□ -0.35
USP39-205ENST00000442708 RGS11O94810 467 aa12.87□□□□□ -0.35
USP39-205ENST00000442708 OR3A3P47888 321 aa12.87□□□□□ -0.35
USP39-205ENST00000442708 ZNF816Q0VGE8 651 aaPredicted RBP12.87□□□□□ -0.35
USP39-205ENST00000442708 TMEM219Q86XT9 240 aa12.87□□□□□ -0.35
USP39-205ENST00000442708 SNX29P2Q8IUI4 249 aa12.87□□□□□ -0.35
USP39-205ENST00000442708 LYG1Q8N1E2 194 aa12.87□□□□□ -0.35
USP39-205ENST00000442708 RTN4IP1Q8WWV3 396 aaPredicted RBP12.87□□□□□ -0.35
USP39-205ENST00000442708 SNAPC3Q92966 411 aa12.87□□□□□ -0.35
USP39-205ENST00000442708 RDH8Q9NYR8 311 aa12.87□□□□□ -0.35
USP39-205ENST00000442708 EXTL2Q9UBQ6 330 aa12.87□□□□□ -0.35
USP39-205ENST00000442708 ANAPC10Q9UM13 185 aa12.87□□□□□ -0.35
USP39-205ENST00000442708 TCF19Q9Y242 345 aa12.87□□□□□ -0.35
USP39-205ENST00000442708 IGHV1-3A0A0C4DH29 117 aa12.86□□□□□ -0.35
USP39-205ENST00000442708 SMIM31A0A1B0GVY4 71 aa12.86□□□□□ -0.35
USP39-205ENST00000442708 RELBQ01201 579 aa12.86□□□□□ -0.35
USP39-205ENST00000442708 CNIH2Q6PI25 160 aa12.86□□□□□ -0.35
USP39-205ENST00000442708 DRAM1Q8N682 238 aa12.86□□□□□ -0.35
USP39-205ENST00000442708 BEST4Q8NFU0 473 aa12.86□□□□□ -0.35
USP39-205ENST00000442708 OR2AK2Q8NG84 335 aa12.86□□□□□ -0.35
USP39-205ENST00000442708 TMEM158Q8WZ71 300 aa12.86□□□□□ -0.35
USP39-205ENST00000442708 ABHD14BQ96IU4 210 aa12.86□□□□□ -0.35
USP39-205ENST00000442708 ZNF251Q9BRH9 671 aa12.86□□□□□ -0.35
USP39-205ENST00000442708 C6orf62Q9GZU0 229 aaPredicted RBP12.86□□□□□ -0.35
USP39-205ENST00000442708 ANXA10Q9UJ72 324 aa12.86□□□□□ -0.35
USP39-205ENST00000442708 SAA2-SAA4A0A096LPE2 208 aa12.85□□□□□ -0.35
USP39-205ENST00000442708 IGHV3-72A0A0B4J1Y9 119 aa12.85□□□□□ -0.35
USP39-205ENST00000442708 BTBD17A6NE02 478 aa12.85□□□□□ -0.35
USP39-205ENST00000442708 FAM90A9PA6NNJ1 464 aa12.85□□□□□ -0.35
USP39-205ENST00000442708 ITGB1BP1O14713 200 aa12.85□□□□□ -0.35
USP39-205ENST00000442708 PROP1O75360 226 aa12.85□□□□□ -0.35
USP39-205ENST00000442708 DIRAS3O95661 229 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms