RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 ZNF136P52737 540 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 SLC25A1P53007 311 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 UBE2NP61088 152 aaKnown RBP2.42□□□□□ -2.02
LIG4-203ENST00000442234 RPS15P62841 145 aaKnown RBP2.42□□□□□ -2.02
LIG4-203ENST00000442234 RPL32P62910 135 aaKnown RBP2.42□□□□□ -2.02
LIG4-203ENST00000442234 RHOGP84095 191 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 SSBP1Q04837 148 aaKnown RBP2.42□□□□□ -2.02
LIG4-203ENST00000442234 ARFRP1Q13795 201 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 CD300EQ496F6 205 aaPredicted RBP2.42□□□□□ -2.02
LIG4-203ENST00000442234 Q56UQ5 140 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 TMEM128Q5BJH2 165 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 CARD17Q5XLA6 110 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 SLC18B1Q6NT16 456 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 FA2HQ7L5A8 372 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 TRAPPC6BQ86SZ2 158 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 CCDC71LQ8N9Z2 235 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 OR10X1Q8NGY0 326 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 OR13G1Q8NGZ3 307 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 AQP3Q92482 292 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 NINJ1Q92982 152 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 ADOQ96SZ5 270 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 IMMP2LQ96T52 175 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 LINC00470Q9BZP3 86 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 SH3BGRL3Q9H299 93 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 SGK2Q9HBY8 427 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 OBP2BQ9NPH6 170 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 PRSS16Q9NQE7 514 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 MBNL3Q9NUK0 354 aaKnown RBP2.42□□□□□ -2.02
LIG4-203ENST00000442234 C1orf123Q9NWV4 160 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 MRPL16Q9NX20 251 aaKnown RBP2.42□□□□□ -2.02
LIG4-203ENST00000442234 JKAMPQ9P055 326 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 GBF1Q92538 1859 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 DNAH3Q8TD57 4116 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 PLXNB2O15031 1838 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 A0A087WUU8 490 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 MUC21A0A0G2JKD1 596 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 MUC21A0A140T8X8 626 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 DUXBA0A1W2PPF3 345 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 C7orf71A4D174 169 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 KIAA1324LA8MWY0 1029 aaPredicted RBP2.41□□□□□ -2.02
LIG4-203ENST00000442234 PPIAL4DF5H284 164 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 H3BUT2 72 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 TACSTD2P09758 323 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 HRH1P35367 487 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 OPRM1P35372 400 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 P2RY1P47900 373 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 SLC6A12P48065 614 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 THBS3P49746 956 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 RND2P52198 227 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 CRYBA2P53672 197 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 RRADP55042 308 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 MFAP4P55083 255 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 ATP5IP56385 69 aaPredicted RBP2.41□□□□□ -2.02
LIG4-203ENST00000442234 PMCHL1Q16048 86 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 ZNF74Q16587 644 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 Q499Y3 187 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 TCTEX1D4Q5JR98 221 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 MUC21Q5SSG8 566 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 STAC2Q6ZMT1 411 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 COLCA1Q6ZS62 124 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 Q6ZWC4 215 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 TMEM217Q8N7C4 229 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 ADAD2Q8NCV1 583 aaKnown RBP2.41□□□□□ -2.02
LIG4-203ENST00000442234 OR2K2Q8NGT1 345 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 OR2AJ1Q8NGZ0 328 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 SCAMP4Q969E2 229 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 RAB37Q96AX2 223 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 FAM3DQ96BQ1 224 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 DAZAP1Q96EP5 407 aaKnown RBP2.41□□□□□ -2.02
LIG4-203ENST00000442234 SLC25A44Q96H78 314 aaPredicted RBP2.41□□□□□ -2.02
LIG4-203ENST00000442234 YPEL4Q96NS1 127 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 GPER1Q99527 375 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 LRRC61Q9BV99 259 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 OR2D2Q9H210 308 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 CHST8Q9H2A9 424 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 C1orf198Q9H425 327 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 TMEM30AQ9NV96 361 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 HHLA2Q9UM44 414 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 MRPS28Q9Y2Q9 187 aaKnown RBP2.41□□□□□ -2.02
LIG4-203ENST00000442234 NSG2Q9Y328 171 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 TIMM8BQ9Y5J9 83 aaPredicted RBP2.41□□□□□ -2.02
LIG4-203ENST00000442234 SPCS1Q9Y6A9 102 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 LRBAP50851 2863 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 DOCK1Q14185 1865 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 A6NDN8 102 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 OR11H12B2RN74 326 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 K7EM74 188 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 M0QXV9 152 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 SERF1AO75920 110 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 NEURL1O76050 574 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 CEACAM5P06731 702 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 FABP2P12104 132 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 GNB3P16520 340 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 ZNF43P17038 809 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 CCKBRP32239 447 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 ZNF93P35789 620 aaPredicted RBP2.41□□□□□ -2.02
LIG4-203ENST00000442234 PDX1P52945 283 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 TAS2R50P59544 299 aa2.41□□□□□ -2.02
LIG4-203ENST00000442234 TIAL1Q01085 375 aaKnown RBP eCLIP2.41□□□□□ -2.02
LIG4-203ENST00000442234 PRICKLE4Q2TBC4 344 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms