RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 TCTEX1D2Q8WW35 142 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 GAFA1Q96PS6 74 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 AQP10Q96PS8 301 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 YPEL2Q96QA6 119 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 TP53RKQ96S44 253 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 CLCC1Q96S66 551 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 CCL13Q99616 98 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 OR2D2Q9H210 308 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 IDI2-AS1Q9NZ38 188 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 PFDN2Q9UHV9 154 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 METRNQ9UJH8 293 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 SESN1Q9Y6P5 492 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 F2RL2O00254 374 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 SCAF4O95104 1147 aaKnown RBP5.03□□□□□ -1.6
VPS50-205ENST00000441602 GYPAP02724 150 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 P2RY1P47900 373 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 ERVK-16P61578 105 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 EXOSC2Q13868 293 aaKnown RBP5.03□□□□□ -1.6
VPS50-205ENST00000441602 CLLU1Q5K131 121 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 C22orf34Q6ZV56 151 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 DRAM1Q8N682 238 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 OR52M1Q8NGK5 317 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 UBALD1Q8TB05 177 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 NEU4Q8WWR8 484 aaPredicted RBP5.03□□□□□ -1.6
VPS50-205ENST00000441602 CCL17Q92583 94 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 GSX2Q9BZM3 304 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 SLC25A10Q9UBX3 287 aaPredicted RBP5.03□□□□□ -1.6
VPS50-205ENST00000441602 PSG11Q9UQ72 335 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 COL6A3P12111 3177 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 TNFSF12O43508 249 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 DEDDO75618 318 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 CLDN1O95832 211 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 RPL12P30050 165 aaKnown RBP5.03□□□□□ -1.6
VPS50-205ENST00000441602 PPP1CCP36873 323 aaKnown RBP5.03□□□□□ -1.6
VPS50-205ENST00000441602 CR1LQ2VPA4 569 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 RFESDQ8TAC1 157 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 ST8SIA2Q92186 375 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 RAB1CQ92928 201 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 SHARPINQ9H0F6 387 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 CBLN4Q9NTU7 201 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 LINC00312Q9Y6C7 94 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 KBTBD11-OT1A0A1B0GTJ5 212 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 DAOP14920 347 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 IL3RAP26951 378 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 LPAR6P43657 344 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 LTC4SQ16873 150 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 Q3ZCU0 254 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 PDZD9Q8IXQ8 264 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 DMRTC2Q8IXT2 367 aaPredicted RBP5.02□□□□□ -1.61
VPS50-205ENST00000441602 CORO2AQ92828 525 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 S1PR3Q99500 378 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 GFOD1Q9NXC2 390 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 CLN8Q9UBY8 286 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 RCL1Q9Y2P8 373 aaKnown RBP5.02□□□□□ -1.61
VPS50-205ENST00000441602 TRBV23-1A0A0A0MS06 115 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 TMPRSS2O15393 492 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 SPDEFO95238 335 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 EPHA1P21709 976 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 SSTR5P35346 364 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 IL15RAQ13261 267 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 TPRX1Q8N7U7 411 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 ZNRF1Q8ND25 227 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 H1FXQ92522 213 aaKnown RBP5.02□□□□□ -1.61
VPS50-205ENST00000441602 RAB40CQ96S21 281 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 AIFM2Q9BRQ8 373 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 TMEM204Q9BSN7 226 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 SLC25A32Q9H2D1 315 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 HEXA-AS1Q9H8Q6 139 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 RNF150Q9ULK6 438 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 GAB2Q9UQC2 676 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 MAP1BP46821 2468 aaKnown RBP5.02□□□□□ -1.61
VPS50-205ENST00000441602 IGHV3-43A0A0B4J1X8 118 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 hCG_1809904A0A1W2PP81 198 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 A0A1W2PPE2 198 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 A0A1W2PR64 198 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 A0A1W2PRV1 198 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 CLEC18AA5D8T8 446 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 RNF222A6NCQ9 220 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 FAM90A26D6RGX4 464 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 C15orf65H3BRN8 121 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 ATXN7O15265 892 aaPredicted RBP5.02□□□□□ -1.61
VPS50-205ENST00000441602 GPR37O15354 613 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 JTBO76095 146 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 FSTL3O95633 263 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 IGHV3-43DP0DP04 118 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 GNLYP22749 145 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 THBS3P49746 956 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 ARHGDIBP52566 201 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 SPAG16Q8N0X2 631 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 FAM216BQ8N7L0 139 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 CLEC18CQ8NCF0 446 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 RNF126Q9BV68 326 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 MMP24Q9Y5R2 645 aa5.02□□□□□ -1.61
VPS50-205ENST00000441602 M0R1X1 148 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 MBPP02686 304 aaPredicted RBP5.01□□□□□ -1.61
VPS50-205ENST00000441602 GAPDHP04406 335 aaKnown RBP5.01□□□□□ -1.61
VPS50-205ENST00000441602 NFYBP25208 207 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 RPL31P62899 125 aaKnown RBP5.01□□□□□ -1.61
VPS50-205ENST00000441602 MRPS11P82912 194 aaKnown RBP5.01□□□□□ -1.61
VPS50-205ENST00000441602 MORN2Q502X0 79 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms