RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 IGHV3-13P01766 116 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 MBPP02686 304 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-209ENST00000440653 ZNF250P15622 560 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 F2RP25116 425 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 GLRXP35754 106 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 CFHR2P36980 270 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 NKX2-1P43699 371 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-209ENST00000440653 KLF3P57682 345 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-209ENST00000440653 SELENOVP59797 346 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 BLOC1S1P78537 153 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 NMSQ5H8A3 153 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 WDR82Q6UXN9 313 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 LYZL2Q7Z4W2 148 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 ZNF808Q8N4W9 903 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-209ENST00000440653 OR11L1Q8NGX0 322 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 PLPPR1Q8TBJ4 325 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 NINJ1Q92982 152 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 LSM10Q969L4 123 aaKnown RBP7.69□□□□□ -1.18
HDAC6-209ENST00000440653 HS3ST6Q96QI5 342 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 FOXC2Q99958 501 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 SLC25A31Q9H0C2 315 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 MMP26Q9NRE1 261 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 LPAR3Q9UBY5 353 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 TINAGQ9UJW2 476 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 IGLV3-9A0A075B6K5 115 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 IGKV1D-13A0A0B4J2D9 117 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 A0A1B0GU03 582 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 SRRM5B3KS81 715 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 WRBO00258 174 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 PITX3O75364 302 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 SCAF4O95104 1147 aaKnown RBP7.68□□□□□ -1.18
HDAC6-209ENST00000440653 SERPINE2P07093 398 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 GRPP07492 148 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 IGKV1-13P0DP09 117 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 RAB5CP51148 216 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 TDGF1P3P51864 188 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 VAMP2P63027 116 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 RBPJQ06330 500 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 CATR1Q13166 79 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 TMEM30BQ3MIR4 351 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 SP6Q3SY56 376 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 FAM74A1Q5RGS3 127 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 FAM219AQ8IW50 185 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 SELENOHQ8IZQ5 122 aaKnown RBP7.68□□□□□ -1.18
HDAC6-209ENST00000440653 COMMD1Q8N668 190 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 RELL2Q8NC24 303 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-209ENST00000440653 LHFPL5Q8TAF8 219 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 PCNPQ8WW12 178 aaKnown RBP7.68□□□□□ -1.18
HDAC6-209ENST00000440653 TMED6Q8WW62 240 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 S100PBPQ96BU1 408 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 GALMQ96C23 342 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 PLEKHF2Q9H8W4 249 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 LYRM2Q9NU23 88 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-209ENST00000440653 ELOVL5Q9NYP7 299 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 TAS2R3Q9NYW6 316 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 LAMP3Q9UQV4 416 aa7.68□□□□□ -1.18
HDAC6-209ENST00000440653 RCL1Q9Y2P8 373 aaKnown RBP7.68□□□□□ -1.18
HDAC6-209ENST00000440653 GTF3C1Q12789 2109 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 FAM90A26D6RGX4 464 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 M0R1B8 84 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 HSD17B6O14756 317 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 PGLYRP1O75594 196 aaPredicted RBP7.67□□□□□ -1.18
HDAC6-209ENST00000440653 SEC11BP0C7V7 166 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 RCC1P18754 421 aaPredicted RBP7.67□□□□□ -1.18
HDAC6-209ENST00000440653 TNFSF4P23510 183 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 GATA4P43694 442 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 SULT1A2P50226 295 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 F2RL1P55085 397 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 TMEM33P57088 247 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 NKX6-1P78426 367 aaPredicted RBP7.67□□□□□ -1.18
HDAC6-209ENST00000440653 SWI5Q1ZZU3 235 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 ALKBH6Q3KRA9 238 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 ZNF474Q6S9Z5 364 aaPredicted RBP7.67□□□□□ -1.18
HDAC6-209ENST00000440653 CLEC9AQ6UXN8 241 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 C20orf204Q6ZNR8 217 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 FOXRED2Q8IWF2 684 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 SPAG16Q8N0X2 631 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 OR2C3Q8N628 320 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 ZNF645Q8N7E2 425 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 NUP37Q8NFH4 326 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 RNASE11Q8TAA1 199 aaKnown RBP7.67□□□□□ -1.18
HDAC6-209ENST00000440653 IL1F10Q8WWZ1 152 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 EDARADDQ8WWZ3 215 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 ERGIC1Q969X5 290 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 MARC2Q969Z3 335 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 SMIM8Q96KF7 97 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 DIRC2Q96SL1 478 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 ARV1Q9H2C2 271 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 NCOR1P1Q9H4R4 102 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 PARP11Q9NR21 331 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 CCL28Q9NRJ3 127 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 OR14J1Q9UGF5 321 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 KCNS2Q9ULS6 477 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 STRAPQ9Y3F4 350 aaKnown RBP7.67□□□□□ -1.18
HDAC6-209ENST00000440653 ANK2Q01484 3957 aa7.67□□□□□ -1.18
HDAC6-209ENST00000440653 AKAP6Q13023 2319 aa7.66□□□□□ -1.18
HDAC6-209ENST00000440653 ZNF705EA8MWA4 302 aaPredicted RBP7.66□□□□□ -1.18
HDAC6-209ENST00000440653 H0YL77 283 aa7.66□□□□□ -1.18
HDAC6-209ENST00000440653 ZNHIT1O43257 154 aa7.66□□□□□ -1.18
HDAC6-209ENST00000440653 SPINT2O43291 252 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms