RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 OR14J1Q9UGF5 321 aa13.02□□□□□ -0.33
APP-208ENST00000439274 TINAGQ9UJW2 476 aa13.02□□□□□ -0.33
APP-208ENST00000439274 MPC1Q9Y5U8 109 aa13.02□□□□□ -0.33
APP-208ENST00000439274 KIAA2026Q5HYC2 2103 aa13.02□□□□□ -0.33
APP-208ENST00000439274 CXorf65A6NEN9 183 aa13.01□□□□□ -0.33
APP-208ENST00000439274 OR5B21A6NL26 309 aa13.01□□□□□ -0.33
APP-208ENST00000439274 SLC25A6P12236 298 aa13.01□□□□□ -0.33
APP-208ENST00000439274 LILRB2Q8N423 598 aa13.01□□□□□ -0.33
APP-208ENST00000439274 CISD1Q9NZ45 108 aaKnown RBP13.01□□□□□ -0.33
APP-208ENST00000439274 TRAPPC2LQ9UL33 140 aa13.01□□□□□ -0.33
APP-208ENST00000439274 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.01□□□□□ -0.33
APP-208ENST00000439274 OR2H2O95918 312 aa13.01□□□□□ -0.33
APP-208ENST00000439274 PLGLB1Q02325 96 aa13.01□□□□□ -0.33
APP-208ENST00000439274 BEND4Q6ZU67 534 aa13.01□□□□□ -0.33
APP-208ENST00000439274 CA5BP1Q8WTZ4 195 aa13.01□□□□□ -0.33
APP-208ENST00000439274 FOXJ2Q9P0K8 574 aa13.01□□□□□ -0.33
APP-208ENST00000439274 KMT2EQ8IZD2 1858 aa13□□□□□ -0.33
APP-208ENST00000439274 IL18BPO95998 194 aa13□□□□□ -0.33
APP-208ENST00000439274 SOD3P08294 240 aa13□□□□□ -0.33
APP-208ENST00000439274 SELEP16581 610 aa13□□□□□ -0.33
APP-208ENST00000439274 MDKP21741 143 aaPredicted RBP13□□□□□ -0.33
APP-208ENST00000439274 S100A2P29034 98 aa13□□□□□ -0.33
APP-208ENST00000439274 CLN3Q13286 438 aa13□□□□□ -0.33
APP-208ENST00000439274 C4orf17Q53FE4 359 aa13□□□□□ -0.33
APP-208ENST00000439274 FAM53AQ6NSI3 398 aaPredicted RBP13□□□□□ -0.33
APP-208ENST00000439274 MDP1Q86V88 176 aa13□□□□□ -0.33
APP-208ENST00000439274 LSM10Q969L4 123 aaKnown RBP13□□□□□ -0.33
APP-208ENST00000439274 OR4C12Q96R67 309 aa13□□□□□ -0.33
APP-208ENST00000439274 GPR61Q9BZJ8 451 aa13□□□□□ -0.33
APP-208ENST00000439274 GAR1Q9NY12 217 aaKnown RBP13□□□□□ -0.33
APP-208ENST00000439274 BDP1A6H8Y1 2624 aa13□□□□□ -0.33
APP-208ENST00000439274 CEBPZOSA8MTT3 80 aa13□□□□□ -0.33
APP-208ENST00000439274 C9orf172C9J069 976 aa13□□□□□ -0.33
APP-208ENST00000439274 J3QT63 122 aa13□□□□□ -0.33
APP-208ENST00000439274 SP9P0CG40 484 aa13□□□□□ -0.33
APP-208ENST00000439274 MDH2P40926 338 aaKnown RBP13□□□□□ -0.33
APP-208ENST00000439274 OR2B11Q5JQS5 317 aa13□□□□□ -0.33
APP-208ENST00000439274 C9orf152Q5JTZ5 239 aa13□□□□□ -0.33
APP-208ENST00000439274 MCEMP1Q8IX19 187 aa13□□□□□ -0.33
APP-208ENST00000439274 OR10G4Q8NGN3 311 aa13□□□□□ -0.33
APP-208ENST00000439274 OR10D4PQ8NGN7 298 aa13□□□□□ -0.33
APP-208ENST00000439274 ABHD5Q8WTS1 349 aa13□□□□□ -0.33
APP-208ENST00000439274 FRZBQ92765 325 aa13□□□□□ -0.33
APP-208ENST00000439274 FAM210BQ96KR6 192 aa13□□□□□ -0.33
APP-208ENST00000439274 PRRC2CQ9Y520 2896 aaKnown RBP13□□□□□ -0.33
APP-208ENST00000439274 COL27A1Q8IZC6 1860 aaPredicted RBP13□□□□□ -0.33
APP-208ENST00000439274 MED13Q9UHV7 2174 aa12.99□□□□□ -0.33
APP-208ENST00000439274 UBE2L5PA0A1B0GUS4 154 aa12.99□□□□□ -0.33
APP-208ENST00000439274 CEACAM6P40199 344 aa12.99□□□□□ -0.33
APP-208ENST00000439274 HOXA4Q00056 320 aaPredicted RBP12.99□□□□□ -0.33
APP-208ENST00000439274 LRRC75BQ2VPJ9 315 aa12.99□□□□□ -0.33
APP-208ENST00000439274 OR8G2PQ6IF36 304 aa12.99□□□□□ -0.33
APP-208ENST00000439274 MBD3L1Q8WWY6 194 aa12.99□□□□□ -0.33
APP-208ENST00000439274 PKIBQ9C010 78 aa12.99□□□□□ -0.33
APP-208ENST00000439274 OPA3Q9H6K4 179 aa12.99□□□□□ -0.33
APP-208ENST00000439274 HMGB3O15347 200 aaKnown RBP12.99□□□□□ -0.33
APP-208ENST00000439274 CELA3BP08861 270 aa12.99□□□□□ -0.33
APP-208ENST00000439274 TRGC1P0CF51 173 aa12.99□□□□□ -0.33
APP-208ENST00000439274 CEBPDP49716 269 aaPredicted RBP12.99□□□□□ -0.33
APP-208ENST00000439274 ERVS71-1P61550 626 aa12.99□□□□□ -0.33
APP-208ENST00000439274 ZNF497Q6ZNH5 498 aa12.99□□□□□ -0.33
APP-208ENST00000439274 DRAM1Q8N682 238 aa12.99□□□□□ -0.33
APP-208ENST00000439274 WDR61Q9GZS3 305 aaKnown RBP12.99□□□□□ -0.33
APP-208ENST00000439274 RBKSQ9H477 322 aa12.99□□□□□ -0.33
APP-208ENST00000439274 ZMAT5Q9UDW3 170 aaKnown RBP12.99□□□□□ -0.33
APP-208ENST00000439274 RNF150Q9ULK6 438 aa12.99□□□□□ -0.33
APP-208ENST00000439274 ARHGAP21Q5T5U3 1957 aa12.99□□□□□ -0.33
APP-208ENST00000439274 NPIPB11E5RHQ5 1161 aa12.98□□□□□ -0.33
APP-208ENST00000439274 NKX6-1P78426 367 aaPredicted RBP12.98□□□□□ -0.33
APP-208ENST00000439274 ALKBH6Q3KRA9 238 aa12.98□□□□□ -0.33
APP-208ENST00000439274 ZNF383Q8NA42 475 aa12.98□□□□□ -0.33
APP-208ENST00000439274 SCCPDHQ8NBX0 429 aa12.98□□□□□ -0.33
APP-208ENST00000439274 PSMG3Q9BT73 122 aaPredicted RBP12.98□□□□□ -0.33
APP-208ENST00000439274 TMEM9BQ9NQ34 198 aa12.98□□□□□ -0.33
APP-208ENST00000439274 MAP1LC3B2A6NCE7 125 aa12.98□□□□□ -0.33
APP-208ENST00000439274 CDIPTO14735 213 aa12.98□□□□□ -0.33
APP-208ENST00000439274 IGKV1D-33P01593 117 aa12.98□□□□□ -0.33
APP-208ENST00000439274 IGKV1-33P01594 117 aa12.98□□□□□ -0.33
APP-208ENST00000439274 ACP1P24666 158 aa12.98□□□□□ -0.33
APP-208ENST00000439274 HBG1P69891 147 aa12.98□□□□□ -0.33
APP-208ENST00000439274 HBG2P69892 147 aa12.98□□□□□ -0.33
APP-208ENST00000439274 C1orf87Q8N0U7 546 aa12.98□□□□□ -0.33
APP-208ENST00000439274 MAP1LC3BQ9GZQ8 125 aa12.98□□□□□ -0.33
APP-208ENST00000439274 SDF2L1Q9HCN8 221 aa12.98□□□□□ -0.33
APP-208ENST00000439274 LIN7CQ9NUP9 197 aaKnown RBP12.98□□□□□ -0.33
APP-208ENST00000439274 GTF3C1Q12789 2109 aa12.98□□□□□ -0.33
APP-208ENST00000439274 A0A1W2PNU3 283 aaPredicted RBP12.97□□□□□ -0.33
APP-208ENST00000439274 B4DEV8 164 aa12.97□□□□□ -0.33
APP-208ENST00000439274 RAMP3O60896 148 aa12.97□□□□□ -0.33
APP-208ENST00000439274 CYB5R3P00387 301 aaPredicted RBP12.97□□□□□ -0.33
APP-208ENST00000439274 CD55P08174 381 aa12.97□□□□□ -0.33
APP-208ENST00000439274 RPS16P62249 146 aaKnown RBP12.97□□□□□ -0.33
APP-208ENST00000439274 TMEM41BQ5BJD5 291 aa12.97□□□□□ -0.33
APP-208ENST00000439274 HIST3H2BBQ8N257 126 aa12.97□□□□□ -0.33
APP-208ENST00000439274 FGFRL1Q8N441 504 aa12.97□□□□□ -0.33
APP-208ENST00000439274 DMRT1Q9Y5R6 373 aa12.97□□□□□ -0.33
APP-208ENST00000439274 CLDN34H7C241 214 aa12.97□□□□□ -0.33
APP-208ENST00000439274 PPP1R2P9O14990 202 aa12.97□□□□□ -0.33
APP-208ENST00000439274 CLDN1O95832 211 aa12.97□□□□□ -0.33
APP-208ENST00000439274 SLC38A11Q08AI6 406 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms