RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 TMEM147Q9BVK8 224 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 TANC1Q9C0D5 1861 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 TICRRQ7Z2Z1 1910 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 CSN1S1P47710 185 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 ZNF90Q03938 601 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 C4orf17Q53FE4 359 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 OR10G4Q8NGN3 311 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 OR10G9Q8NGN4 311 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 OR10G7Q8NGN6 311 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 OR13D1Q8NGV5 346 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 ZDHHC16Q969W1 377 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 WDYHV1Q96HA8 205 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 FKBP11Q9NYL4 201 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 SEMA5BQ9P283 1151 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 POMT1Q9Y6A1 747 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 FAM90A10PA6NDY2 464 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 FAM90A18PA6NE21 464 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 FAM90A16PA6NEW6 464 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 FAM90A20PA6NIJ5 464 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 FAM90A8PA6NJQ4 464 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 FAM90A7PA6NKC0 464 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 FAM90A22PA8MWA6 464 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 FAM90A12PA8MX19 464 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 FAM90A5PA8MXJ8 464 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 FAM90A23PA8MXZ1 464 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 FAM90A15PP0C7V4 464 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 FAM90A13PP0C7W8 464 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 FAM90A14PP0C7W9 464 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 FAM90A24PP0C7X0 464 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 CEACAM3P40198 252 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 DVL1P1P54792 670 aaPredicted RBP10.54□□□□□ -0.72
TCOF1-205ENST00000439160 TMEM65Q6PI78 240 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 UQCC3Q6UW78 93 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 ZNF429Q86V71 674 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 COMMD1Q8N668 190 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 GINS3Q9BRX5 216 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 SFXN3Q9BWM7 321 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 INSIG2Q9Y5U4 225 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 PLXNA4Q9HCM2 1894 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 WNT9BO14905 357 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 RHBDL1O75783 438 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 ACSM6Q6P461 480 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 BMPERQ8N8U9 685 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 GP6Q9HCN6 339 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 A0A1B0GU03 582 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 ZNF716A6NP11 495 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 CYB5R3P00387 301 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-205ENST00000439160 CELA3BP08861 270 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 C9orf106Q8NAJ2 232 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 ZBTB34Q8NCN2 500 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 OR10S1Q8NGN2 331 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 LHFPL5Q8TAF8 219 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 VSTM2AQ8TAG5 236 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 SSMEM1Q8WWF3 244 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 NEIL1Q96FI4 390 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-205ENST00000439160 BTF3L4Q96K17 158 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 ATP5SQ99766 215 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 PIPOXQ9P0Z9 390 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 CLDN16Q9Y5I7 305 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 CRYM-AS1A6NIL9 109 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 CT45A10P0DMU9 189 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 CSRP1P21291 193 aaKnown RBP10.53□□□□□ -0.72
TCOF1-205ENST00000439160 CDC34P49427 236 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-205ENST00000439160 NAAAQ02083 359 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 ASPHD2Q6ICH7 369 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 OR10C1Q96KK4 312 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 KIAA2026Q5HYC2 2103 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 A0A1W2PN81 502 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 ODAMA1E959 279 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 ATXN7O15265 892 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-205ENST00000439160 F12P00748 615 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-205ENST00000439160 CHRNA7P36544 502 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 GLIPR1P48060 266 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 SULT1A1P50225 295 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 ABLIM2Q6H8Q1 611 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 OR5P3Q8WZ94 311 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 FLYWCH2Q96CP2 140 aaKnown RBP10.53□□□□□ -0.72
TCOF1-205ENST00000439160 OR51I2Q9H344 312 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 V9GYS6 101 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 DVL1O14640 695 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 SFTPCP11686 197 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 IGHV1-2P23083 117 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 FOXG1P55316 489 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-205ENST00000439160 Q0VFX4 171 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 CXorf66Q5JRM2 361 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-205ENST00000439160 TMEM222Q9H0R3 208 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 MMP24Q9Y5R2 645 aa10.53□□□□□ -0.72
TCOF1-205ENST00000439160 B3GALNT1O75752 331 aa10.52□□□□□ -0.72
TCOF1-205ENST00000439160 LY86O95711 162 aa10.52□□□□□ -0.72
TCOF1-205ENST00000439160 CD74P04233 296 aa10.52□□□□□ -0.72
TCOF1-205ENST00000439160 BTNL8Q6UX41 500 aa10.52□□□□□ -0.72
TCOF1-205ENST00000439160 BCL2L2Q92843 193 aaPredicted RBP10.52□□□□□ -0.72
TCOF1-205ENST00000439160 SAT2Q96F10 170 aaPredicted RBP10.52□□□□□ -0.72
TCOF1-205ENST00000439160 ABHD14AQ9BUJ0 271 aa10.52□□□□□ -0.72
TCOF1-205ENST00000439160 SLC35B3Q9H1N7 401 aa10.52□□□□□ -0.72
TCOF1-205ENST00000439160 ZNF331Q9NQX6 463 aaPredicted RBP10.52□□□□□ -0.72
TCOF1-205ENST00000439160 LPAR3Q9UBY5 353 aa10.52□□□□□ -0.72
TCOF1-205ENST00000439160 MRPS18CQ9Y3D5 142 aaKnown RBP10.52□□□□□ -0.72
TCOF1-205ENST00000439160 FRMPD3Q5JV73 1810 aa10.52□□□□□ -0.73
TCOF1-205ENST00000439160 TMEM218A2RU14 115 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms