RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 Q8TCH9 128 aa21.48■■□□□ 1.03
CPNE1-216ENST00000437340 FAM222BQ8WU58 562 aa21.48■■□□□ 1.03
CPNE1-216ENST00000437340 RNF7Q9UBF6 113 aa21.48■■□□□ 1.03
CPNE1-216ENST00000437340 ABCD4O14678 606 aa21.47■■□□□ 1.03
CPNE1-216ENST00000437340 SPINT2O43291 252 aa21.47■■□□□ 1.03
CPNE1-216ENST00000437340 CR1LQ2VPA4 569 aa21.47■■□□□ 1.03
CPNE1-216ENST00000437340 BOLLQ8N9W6 283 aaKnown RBP21.47■■□□□ 1.03
CPNE1-216ENST00000437340 OR52L2PQ8NGH6 319 aa21.47■■□□□ 1.03
CPNE1-216ENST00000437340 DIRC2Q96SL1 478 aa21.47■■□□□ 1.03
CPNE1-216ENST00000437340 NCOR1P1Q9H4R4 102 aa21.47■■□□□ 1.03
CPNE1-216ENST00000437340 GCM1Q9NP62 436 aa21.47■■□□□ 1.03
CPNE1-216ENST00000437340 USP24Q9UPU5 2620 aa21.47■■□□□ 1.03
CPNE1-216ENST00000437340 KRBOX1C9JBD0 128 aa21.46■■□□□ 1.03
CPNE1-216ENST00000437340 ADH4P08319 380 aa21.46■■□□□ 1.03
CPNE1-216ENST00000437340 GZMHP20718 246 aa21.46■■□□□ 1.03
CPNE1-216ENST00000437340 ZP3P21754 424 aa21.46■■□□□ 1.03
CPNE1-216ENST00000437340 ST6GALNAC3Q8NDV1 305 aa21.46■■□□□ 1.03
CPNE1-216ENST00000437340 FAM216AQ8WUB2 273 aa21.46■■□□□ 1.03
CPNE1-216ENST00000437340 ARL11Q969Q4 196 aa21.46■■□□□ 1.03
CPNE1-216ENST00000437340 C15orf65H3BRN8 121 aa21.46■■□□□ 1.03
CPNE1-216ENST00000437340 K7N7A8 449 aa21.46■■□□□ 1.03
CPNE1-216ENST00000437340 PITX3O75364 302 aa21.46■■□□□ 1.03
CPNE1-216ENST00000437340 FAM157CP0CG43 387 aa21.46■■□□□ 1.03
CPNE1-216ENST00000437340 OR2C3Q8N628 320 aa21.46■■□□□ 1.03
CPNE1-216ENST00000437340 NGBQ9NPG2 151 aa21.46■■□□□ 1.03
CPNE1-216ENST00000437340 ODAMA1E959 279 aa21.45■■□□□ 1.02
CPNE1-216ENST00000437340 POLR2GP62487 172 aaKnown RBP eCLIP21.45■■□□□ 1.02
CPNE1-216ENST00000437340 BSPH1Q075Z2 132 aa21.45■■□□□ 1.02
CPNE1-216ENST00000437340 CXorf66Q5JRM2 361 aaPredicted RBP21.45■■□□□ 1.02
CPNE1-216ENST00000437340 TPRX1Q8N7U7 411 aa21.45■■□□□ 1.02
CPNE1-216ENST00000437340 GPR146Q96CH1 333 aa21.45■■□□□ 1.02
CPNE1-216ENST00000437340 ARV1Q9H2C2 271 aa21.45■■□□□ 1.02
CPNE1-216ENST00000437340 SSTR5P35346 364 aa21.44■■□□□ 1.02
CPNE1-216ENST00000437340 OR2D2Q9H210 308 aa21.44■■□□□ 1.02
CPNE1-216ENST00000437340 KIAA2026Q5HYC2 2103 aa21.44■■□□□ 1.02
CPNE1-216ENST00000437340 IGHV3OR15-7A0A075B7D8 119 aa21.43■■□□□ 1.02
CPNE1-216ENST00000437340 BORCS7-ASMTA0A0B4J1R7 106 aa21.43■■□□□ 1.02
CPNE1-216ENST00000437340 IGKV1-39P01597 117 aa21.43■■□□□ 1.02
CPNE1-216ENST00000437340 IGKV1D-39P04432 117 aa21.43■■□□□ 1.02
CPNE1-216ENST00000437340 CASP6P55212 293 aa21.43■■□□□ 1.02
CPNE1-216ENST00000437340 EDDM3AQ14507 147 aa21.43■■□□□ 1.02
CPNE1-216ENST00000437340 ZNF585BQ52M93 769 aa21.43■■□□□ 1.02
CPNE1-216ENST00000437340 ZNF561Q8N587 486 aa21.43■■□□□ 1.02
CPNE1-216ENST00000437340 SAT2Q96F10 170 aaPredicted RBP21.43■■□□□ 1.02
CPNE1-216ENST00000437340 SLC25A31Q9H0C2 315 aa21.43■■□□□ 1.02
CPNE1-216ENST00000437340 LYRM2Q9NU23 88 aaPredicted RBP21.43■■□□□ 1.02
CPNE1-216ENST00000437340 NUDT19A8MXV4 375 aa21.43■■□□□ 1.02
CPNE1-216ENST00000437340 CD55P08174 381 aa21.43■■□□□ 1.02
CPNE1-216ENST00000437340 VAMP2P63027 116 aa21.43■■□□□ 1.02
CPNE1-216ENST00000437340 EIF4EBP1Q13541 118 aaPredicted RBP21.43■■□□□ 1.02
CPNE1-216ENST00000437340 ADIPOQQ15848 244 aa21.43■■□□□ 1.02
CPNE1-216ENST00000437340 TCTEX1D1Q8N7M0 179 aa21.43■■□□□ 1.02
CPNE1-216ENST00000437340 SMIM3Q9BZL3 60 aa21.43■■□□□ 1.02
CPNE1-216ENST00000437340 FAM212BQ9NTI7 297 aaPredicted RBP21.43■■□□□ 1.02
CPNE1-216ENST00000437340 TAS2R3Q9NYW6 316 aa21.43■■□□□ 1.02
CPNE1-216ENST00000437340 LPAR3Q9UBY5 353 aa21.43■■□□□ 1.02
CPNE1-216ENST00000437340 PLCE1Q9P212 2302 aa21.42■■□□□ 1.02
CPNE1-216ENST00000437340 TRGV8A0A0C4DH27 118 aa21.42■■□□□ 1.02
CPNE1-216ENST00000437340 A0A0G2JRQ6 117 aa21.42■■□□□ 1.02
CPNE1-216ENST00000437340 OR4A8P0C604 315 aa21.42■■□□□ 1.02
CPNE1-216ENST00000437340 PPP1CCP36873 323 aaKnown RBP21.42■■□□□ 1.02
CPNE1-216ENST00000437340 SDSLQ96GA7 329 aa21.42■■□□□ 1.02
CPNE1-216ENST00000437340 RAB19A4D1S5 217 aa21.41■■□□□ 1.02
CPNE1-216ENST00000437340 VSTM5A8MXK1 200 aa21.41■■□□□ 1.02
CPNE1-216ENST00000437340 SSSCA1O60232 199 aa21.41■■□□□ 1.02
CPNE1-216ENST00000437340 EWSR1Q01844 656 aaKnown RBP eCLIP21.41■■□□□ 1.02
CPNE1-216ENST00000437340 CATR1Q13166 79 aa21.41■■□□□ 1.02
CPNE1-216ENST00000437340 RNASE11Q8TAA1 199 aaKnown RBP21.41■■□□□ 1.02
CPNE1-216ENST00000437340 MARC2Q969Z3 335 aa21.41■■□□□ 1.02
CPNE1-216ENST00000437340 BSCL2Q96G97 398 aaPredicted RBP21.41■■□□□ 1.02
CPNE1-216ENST00000437340 RNF115Q9Y4L5 304 aa21.41■■□□□ 1.02
CPNE1-216ENST00000437340 TEX46H3BTG2 121 aa21.41■■□□□ 1.02
CPNE1-216ENST00000437340 WRBO00258 174 aa21.41■■□□□ 1.02
CPNE1-216ENST00000437340 ZNF16P17020 682 aaPredicted RBP21.41■■□□□ 1.02
CPNE1-216ENST00000437340 TNFRSF1AP19438 455 aa21.41■■□□□ 1.02
CPNE1-216ENST00000437340 CD80P33681 288 aa21.41■■□□□ 1.02
CPNE1-216ENST00000437340 SULT1A2P50226 295 aa21.41■■□□□ 1.02
CPNE1-216ENST00000437340 STUMQ69YW2 141 aa21.41■■□□□ 1.02
CPNE1-216ENST00000437340 OR1S2Q8NGQ3 325 aa21.41■■□□□ 1.02
CPNE1-216ENST00000437340 EDARADDQ8WWZ3 215 aa21.41■■□□□ 1.02
CPNE1-216ENST00000437340 SMIM8Q96KF7 97 aa21.41■■□□□ 1.02
CPNE1-216ENST00000437340 LINC00052Q96N35 136 aa21.41■■□□□ 1.02
CPNE1-216ENST00000437340 OR6C3Q9NZP0 311 aa21.41■■□□□ 1.02
CPNE1-216ENST00000437340 JPT1Q9UK76 154 aa21.41■■□□□ 1.02
CPNE1-216ENST00000437340 RNF150Q9ULK6 438 aa21.41■■□□□ 1.02
CPNE1-216ENST00000437340 COL6A6A6NMZ7 2263 aa21.4■■□□□ 1.02
CPNE1-216ENST00000437340 POLEQ07864 2286 aa21.4■■□□□ 1.02
CPNE1-216ENST00000437340 CAV2P51636 162 aa21.4■■□□□ 1.02
CPNE1-216ENST00000437340 AKR1C2P52895 323 aa21.4■■□□□ 1.02
CPNE1-216ENST00000437340 NHLH2Q02577 135 aa21.4■■□□□ 1.02
CPNE1-216ENST00000437340 UQCC3Q6UW78 93 aa21.4■■□□□ 1.02
CPNE1-216ENST00000437340 ZNRF1Q8ND25 227 aa21.4■■□□□ 1.02
CPNE1-216ENST00000437340 RFESDQ8TAC1 157 aa21.4■■□□□ 1.02
CPNE1-216ENST00000437340 C14orf79Q96F83 325 aa21.4■■□□□ 1.02
CPNE1-216ENST00000437340 WFIKKN1Q96NZ8 548 aa21.4■■□□□ 1.02
CPNE1-216ENST00000437340 DCTN5Q9BTE1 182 aa21.4■■□□□ 1.02
CPNE1-216ENST00000437340 MAGT1Q9H0U3 335 aa21.4■■□□□ 1.02
CPNE1-216ENST00000437340 RAB9BQ9NP90 201 aa21.4■■□□□ 1.02
CPNE1-216ENST00000437340 PCNX1Q96RV3 2341 aa21.39■■□□□ 1.02
CPNE1-216ENST00000437340 FAM24AA6NFZ4 105 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms