RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 SESN1Q9Y6P5 492 aa18.87■□□□□ 0.61
CPSF4-204ENST00000436336 CTSDP07339 412 aaPredicted RBP18.86■□□□□ 0.61
CPSF4-204ENST00000436336 OR8U9P0C7N5 309 aa18.86■□□□□ 0.61
CPSF4-204ENST00000436336 RAB25P57735 213 aa18.86■□□□□ 0.61
CPSF4-204ENST00000436336 TMED4Q7Z7H5 227 aa18.86■□□□□ 0.61
CPSF4-204ENST00000436336 LDLRAD3Q86YD5 345 aa18.86■□□□□ 0.61
CPSF4-204ENST00000436336 OR2AK2Q8NG84 335 aa18.86■□□□□ 0.61
CPSF4-204ENST00000436336 OR8U1Q8NH10 309 aa18.86■□□□□ 0.61
CPSF4-204ENST00000436336 Q96MF0 132 aa18.86■□□□□ 0.61
CPSF4-204ENST00000436336 RSRP1Q9BUV0 290 aa18.86■□□□□ 0.61
CPSF4-204ENST00000436336 C14orf166Q9Y224 244 aaKnown RBP18.86■□□□□ 0.61
CPSF4-204ENST00000436336 CR1P17927 2039 aa18.86■□□□□ 0.61
CPSF4-204ENST00000436336 A0A087X0M5 115 aa18.86■□□□□ 0.61
CPSF4-204ENST00000436336 A0A1B0GX30 115 aa18.86■□□□□ 0.61
CPSF4-204ENST00000436336 ARF6P62330 175 aa18.86■□□□□ 0.61
CPSF4-204ENST00000436336 C1orf122Q6ZSJ8 110 aa18.86■□□□□ 0.61
CPSF4-204ENST00000436336 ZNF486Q96H40 463 aaPredicted RBP18.86■□□□□ 0.61
CPSF4-204ENST00000436336 RTBDNQ9BSG5 229 aaPredicted RBP18.86■□□□□ 0.61
CPSF4-204ENST00000436336 PDZD2O15018 2839 aa18.85■□□□□ 0.61
CPSF4-204ENST00000436336 ANXA7P20073 488 aaKnown RBP18.85■□□□□ 0.61
CPSF4-204ENST00000436336 GNRHRP30968 328 aa18.85■□□□□ 0.61
CPSF4-204ENST00000436336 VPS13CQ709C8 3753 aa18.85■□□□□ 0.61
CPSF4-204ENST00000436336 ZNF439Q8NDP4 499 aa18.85■□□□□ 0.61
CPSF4-204ENST00000436336 LEAP2Q969E1 77 aa18.85■□□□□ 0.61
CPSF4-204ENST00000436336 C1orf159Q96HA4 380 aa18.85■□□□□ 0.61
CPSF4-204ENST00000436336 REG4Q9BYZ8 158 aa18.85■□□□□ 0.61
CPSF4-204ENST00000436336 ALX4Q9H161 411 aaPredicted RBP18.85■□□□□ 0.61
CPSF4-204ENST00000436336 TMEM133Q9H2Q1 129 aa18.85■□□□□ 0.61
CPSF4-204ENST00000436336 MMP26Q9NRE1 261 aa18.85■□□□□ 0.61
CPSF4-204ENST00000436336 KPTNQ9Y664 436 aa18.85■□□□□ 0.61
CPSF4-204ENST00000436336 PI3P19957 117 aa18.84■□□□□ 0.61
CPSF4-204ENST00000436336 RAB7AP51149 207 aa18.84■□□□□ 0.61
CPSF4-204ENST00000436336 TAS2R31P59538 309 aa18.84■□□□□ 0.61
CPSF4-204ENST00000436336 UTF1Q5T230 341 aa18.84■□□□□ 0.61
CPSF4-204ENST00000436336 BTNL3Q6UXE8 466 aa18.84■□□□□ 0.61
CPSF4-204ENST00000436336 SLC25A42Q86VD7 318 aa18.84■□□□□ 0.61
CPSF4-204ENST00000436336 Q8N7P7 452 aa18.84■□□□□ 0.61
CPSF4-204ENST00000436336 AGMATQ9BSE5 352 aa18.84■□□□□ 0.61
CPSF4-204ENST00000436336 ABHD14AQ9BUJ0 271 aa18.84■□□□□ 0.61
CPSF4-204ENST00000436336 SUCNR1Q9BXA5 334 aa18.84■□□□□ 0.61
CPSF4-204ENST00000436336 CCL28Q9NRJ3 127 aa18.84■□□□□ 0.61
CPSF4-204ENST00000436336 PRRC2AP48634 2157 aaKnown RBP18.84■□□□□ 0.61
CPSF4-204ENST00000436336 RNF223E7ERA6 249 aa18.83■□□□□ 0.61
CPSF4-204ENST00000436336 PRAF2O60831 178 aa18.83■□□□□ 0.61
CPSF4-204ENST00000436336 IGHV3-7P01780 117 aa18.83■□□□□ 0.61
CPSF4-204ENST00000436336 ZNF134P52741 427 aa18.83■□□□□ 0.61
CPSF4-204ENST00000436336 ABCA11PQ4W5N1 156 aa18.83■□□□□ 0.61
CPSF4-204ENST00000436336 ZNF818PQ6ZRF7 136 aa18.83■□□□□ 0.61
CPSF4-204ENST00000436336 METTL8Q9H825 291 aaKnown RBP18.83■□□□□ 0.61
CPSF4-204ENST00000436336 LPAR2Q9HBW0 351 aa18.83■□□□□ 0.61
CPSF4-204ENST00000436336 PSG11Q9UQ72 335 aa18.83■□□□□ 0.61
CPSF4-204ENST00000436336 GPR31O00270 319 aa18.83■□□□□ 0.6
CPSF4-204ENST00000436336 ST8SIA5O15466 376 aa18.83■□□□□ 0.6
CPSF4-204ENST00000436336 SLC22A5O76082 557 aa18.83■□□□□ 0.6
CPSF4-204ENST00000436336 TATDN3Q17R31 274 aa18.83■□□□□ 0.6
CPSF4-204ENST00000436336 CT45A1Q5HYN5 189 aa18.83■□□□□ 0.6
CPSF4-204ENST00000436336 ZNF645Q8N7E2 425 aa18.83■□□□□ 0.6
CPSF4-204ENST00000436336 C8orf31Q8N9H6 132 aa18.83■□□□□ 0.6
CPSF4-204ENST00000436336 ADAD2Q8NCV1 583 aaKnown RBP18.83■□□□□ 0.6
CPSF4-204ENST00000436336 CT45A3Q8NHU0 189 aa18.83■□□□□ 0.6
CPSF4-204ENST00000436336 AKR1E2Q96JD6 320 aa18.83■□□□□ 0.6
CPSF4-204ENST00000436336 BEX2Q9BXY8 128 aa18.83■□□□□ 0.6
CPSF4-204ENST00000436336 OR2D2Q9H210 308 aa18.83■□□□□ 0.6
CPSF4-204ENST00000436336 BEX1Q9HBH7 125 aa18.83■□□□□ 0.6
CPSF4-204ENST00000436336 ITPR2Q14571 2701 aa18.82■□□□□ 0.6
CPSF4-204ENST00000436336 VGLL3A8MV65 326 aa18.82■□□□□ 0.6
CPSF4-204ENST00000436336 B4DSR2 109 aa18.82■□□□□ 0.6
CPSF4-204ENST00000436336 HSD17B6O14756 317 aa18.82■□□□□ 0.6
CPSF4-204ENST00000436336 IL5P05113 134 aa18.82■□□□□ 0.6
CPSF4-204ENST00000436336 CD34P28906 385 aa18.82■□□□□ 0.6
CPSF4-204ENST00000436336 GNG10P50151 68 aa18.82■□□□□ 0.6
CPSF4-204ENST00000436336 DVL1P1P54792 670 aaPredicted RBP18.82■□□□□ 0.6
CPSF4-204ENST00000436336 UBE2MP61081 183 aaKnown RBP18.82■□□□□ 0.6
CPSF4-204ENST00000436336 MSMO1Q15800 293 aa18.82■□□□□ 0.6
CPSF4-204ENST00000436336 FAHD2BQ6P2I3 314 aaPredicted RBP18.82■□□□□ 0.6
CPSF4-204ENST00000436336 SLC25A48Q6ZT89 311 aaKnown RBP18.82■□□□□ 0.6
CPSF4-204ENST00000436336 FAHD2AQ96GK7 314 aa18.82■□□□□ 0.6
CPSF4-204ENST00000436336 SLC2A9Q9NRM0 540 aa18.82■□□□□ 0.6
CPSF4-204ENST00000436336 RNF150Q9ULK6 438 aa18.82■□□□□ 0.6
CPSF4-204ENST00000436336 KCNS2Q9ULS6 477 aa18.82■□□□□ 0.6
CPSF4-204ENST00000436336 INSIG2Q9Y5U4 225 aa18.82■□□□□ 0.6
CPSF4-204ENST00000436336 ASH1LQ9NR48 2969 aaKnown RBP18.82■□□□□ 0.6
CPSF4-204ENST00000436336 MED13LQ71F56 2210 aa18.81■□□□□ 0.6
CPSF4-204ENST00000436336 A0A0B4J293 547 aa18.81■□□□□ 0.6
CPSF4-204ENST00000436336 SLC31A2O15432 143 aa18.81■□□□□ 0.6
CPSF4-204ENST00000436336 MSMBP08118 114 aa18.81■□□□□ 0.6
CPSF4-204ENST00000436336 VSIG10L2P0DP72 767 aa18.81■□□□□ 0.6
CPSF4-204ENST00000436336 AKR1C4P17516 323 aa18.81■□□□□ 0.6
CPSF4-204ENST00000436336 PRTN3P24158 256 aa18.81■□□□□ 0.6
CPSF4-204ENST00000436336 PIGPP57054 158 aa18.81■□□□□ 0.6
CPSF4-204ENST00000436336 TMEM128Q5BJH2 165 aa18.81■□□□□ 0.6
CPSF4-204ENST00000436336 METTL11BQ5VVY1 283 aa18.81■□□□□ 0.6
CPSF4-204ENST00000436336 GLDNQ6ZMI3 551 aaPredicted RBP18.81■□□□□ 0.6
CPSF4-204ENST00000436336 CMTM1Q8IZ96 169 aa18.81■□□□□ 0.6
CPSF4-204ENST00000436336 BVESQ8NE79 360 aa18.81■□□□□ 0.6
CPSF4-204ENST00000436336 OR9G1Q8NH87 305 aa18.81■□□□□ 0.6
CPSF4-204ENST00000436336 CAPSLQ8WWF8 208 aa18.81■□□□□ 0.6
CPSF4-204ENST00000436336 TMEM230Q96A57 120 aa18.81■□□□□ 0.6
CPSF4-204ENST00000436336 IFI27L2Q9H2X8 130 aa18.81■□□□□ 0.6
CPSF4-204ENST00000436336 A0A1B0GVG6 124 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms