RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 LRRC75BQ2VPJ9 315 aa8.78□□□□□ -1
CD44-210ENST00000434472 ACP7Q6ZNF0 438 aa8.78□□□□□ -1
CD44-210ENST00000434472 ZNF295-AS1Q8N0V1 137 aa8.78□□□□□ -1
CD44-210ENST00000434472 LILRB2Q8N423 598 aa8.78□□□□□ -1
CD44-210ENST00000434472 FAM169BQ8N8A8 192 aa8.78□□□□□ -1
CD44-210ENST00000434472 FAM216AQ8WUB2 273 aa8.78□□□□□ -1
CD44-210ENST00000434472 MBD3L1Q8WWY6 194 aa8.78□□□□□ -1
CD44-210ENST00000434472 PINX1Q96BK5 328 aaKnown RBP8.78□□□□□ -1
CD44-210ENST00000434472 LURAP1Q96LR2 239 aa8.78□□□□□ -1
CD44-210ENST00000434472 TAAR6Q96RI8 345 aa8.78□□□□□ -1
CD44-210ENST00000434472 RARRES2Q99969 163 aa8.78□□□□□ -1
CD44-210ENST00000434472 PLSCR4Q9NRQ2 329 aa8.78□□□□□ -1
CD44-210ENST00000434472 TINAGQ9UJW2 476 aa8.78□□□□□ -1
CD44-210ENST00000434472 WASF3Q9UPY6 502 aa8.78□□□□□ -1
CD44-210ENST00000434472 LAMP3Q9UQV4 416 aa8.78□□□□□ -1
CD44-210ENST00000434472 LOC102723971A0A1B0GUV8 181 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 MED19A0JLT2 244 aaPredicted RBP8.77□□□□□ -1.01
CD44-210ENST00000434472 C3orf80F5H4A9 247 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 MLNRO43193 412 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 PPIHO43447 177 aaKnown RBP8.77□□□□□ -1.01
CD44-210ENST00000434472 IFNA1P01562 189 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 S100A6P06703 90 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 IAPPP10997 89 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 RAB5AP20339 215 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 AGAP20933 346 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 AKR1C3P42330 323 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 HAGHQ16775 308 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 SMIM21Q3B7S5 101 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 KRBOX4Q5JUW0 171 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 MBNL2Q5VZF2 373 aaKnown RBP8.77□□□□□ -1.01
CD44-210ENST00000434472 ETV3LQ6ZN32 361 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 C11orf53Q8IXP5 236 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 FGFRL1Q8N441 504 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 C9orf106Q8NAJ2 232 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 FDCSPQ8NFU4 85 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 CLDND2Q8NHS1 167 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 TVP23CQ96ET8 276 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 SEBOXQ9HB31 216 aaPredicted RBP8.77□□□□□ -1.01
CD44-210ENST00000434472 PROCRQ9UNN8 238 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 TIMM9Q9Y5J7 89 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 PUS1Q9Y606 427 aaKnown RBP eCLIP8.77□□□□□ -1.01
CD44-210ENST00000434472 RFNGQ9Y644 331 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 ZNF407Q9C0G0 2248 aa8.77□□□□□ -1.01
CD44-210ENST00000434472 A0A1W2PPH5 198 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 A6NLC8 198 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 B4DEV8 164 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 C12orf77C9JDV5 145 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 H3BP45 60 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 H3BQ15 152 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 RAB29O14966 203 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 AGFG2O95081 481 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 OR2C1O95371 312 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 LY86O95711 162 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 IFNA17P01571 189 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 IGLV1-44P01699 117 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 HBZP02008 142 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 FTH1P19P0C7X4 201 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 UBE2KP61086 200 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 PAX5Q02548 391 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 P2RY6Q15077 328 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 IGF2-ASQ6U949 168 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 ZNF66Q6ZN08 573 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 ZNF429Q86V71 674 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 OR1L1Q8NH94 360 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 C20orf24Q9BUV8 137 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 OR2D2Q9H210 308 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 SIRT7Q9NRC8 400 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.76□□□□□ -1.01
CD44-210ENST00000434472 CISD1Q9NZ45 108 aaKnown RBP8.76□□□□□ -1.01
CD44-210ENST00000434472 HSPB7Q9UBY9 170 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 AHCTF1Q8WYP5 2266 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 MED13Q9UHV7 2174 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 A0A1B0GWJ7 208 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 ZNF98A6NK75 572 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 GALR2O43603 387 aaPredicted RBP8.76□□□□□ -1.01
CD44-210ENST00000434472 PSPNO60542 156 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 METTL15P1P0C7V9 234 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 CECR9P0C854 216 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 EIF2S3P41091 472 aaKnown RBP8.76□□□□□ -1.01
CD44-210ENST00000434472 TNFRSF9Q07011 255 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 SLC38A11Q08AI6 406 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 EIF4EBP1Q13541 118 aaPredicted RBP8.76□□□□□ -1.01
CD44-210ENST00000434472 PMS2P11Q13670 270 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 IZUMO4Q1ZYL8 232 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 TMEM41BQ5BJD5 291 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 VWA1Q6PCB0 445 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 WDR82Q6UXN9 313 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 TMEM14EPQ6UXP3 125 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 SLC35E3Q7Z769 313 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 FAM90A1Q86YD7 464 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 C1QL4Q86Z23 238 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 IQCF2Q8IXL9 164 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 ZFP82Q8N141 532 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 C2CD4CQ8TF44 421 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 CIB3Q96Q77 187 aaPredicted RBP8.76□□□□□ -1.01
CD44-210ENST00000434472 P2RX4Q99571 388 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 NIPSNAP3BQ9BS92 247 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 WDR61Q9GZS3 305 aaKnown RBP8.76□□□□□ -1.01
CD44-210ENST00000434472 RBKSQ9H477 322 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 ESRP2Q9H6T0 727 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms