RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 JAGN1Q8N5M9 183 aa11.52□□□□□ -0.57
PRKDC-203ENST00000432581 TCTEX1D1Q8N7M0 179 aa11.52□□□□□ -0.57
PRKDC-203ENST00000432581 OR13C5Q8NGS8 318 aa11.52□□□□□ -0.57
PRKDC-203ENST00000432581 GHSRQ92847 366 aa11.52□□□□□ -0.57
PRKDC-203ENST00000432581 DLX4Q92988 240 aaPredicted RBP11.52□□□□□ -0.57
PRKDC-203ENST00000432581 RITA1Q96K30 269 aa11.52□□□□□ -0.57
PRKDC-203ENST00000432581 RDH12Q96NR8 316 aa11.52□□□□□ -0.57
PRKDC-203ENST00000432581 SELENOIQ9C0D9 397 aa11.52□□□□□ -0.57
PRKDC-203ENST00000432581 TOLLIPQ9H0E2 274 aa11.52□□□□□ -0.57
PRKDC-203ENST00000432581 TRAV8-7A0A075B6U6 113 aa11.51□□□□□ -0.57
PRKDC-203ENST00000432581 YPEL1O60688 119 aa11.51□□□□□ -0.57
PRKDC-203ENST00000432581 NDUFA3O95167 84 aa11.51□□□□□ -0.57
PRKDC-203ENST00000432581 LGALS1P09382 135 aaKnown RBP11.51□□□□□ -0.57
PRKDC-203ENST00000432581 OR8U9P0C7N5 309 aa11.51□□□□□ -0.57
PRKDC-203ENST00000432581 MGMTP16455 207 aa11.51□□□□□ -0.57
PRKDC-203ENST00000432581 MYL12AP19105 171 aa11.51□□□□□ -0.57
PRKDC-203ENST00000432581 PPP1CCP36873 323 aaKnown RBP11.51□□□□□ -0.57
PRKDC-203ENST00000432581 CRIP2P52943 208 aaPredicted RBP11.51□□□□□ -0.57
PRKDC-203ENST00000432581 GNMTQ14749 295 aa11.51□□□□□ -0.57
PRKDC-203ENST00000432581 LY6G6FQ5SQ64 297 aa11.51□□□□□ -0.57
PRKDC-203ENST00000432581 ZNF660Q6AZW8 331 aaPredicted RBP11.51□□□□□ -0.57
PRKDC-203ENST00000432581 ACSM6Q6P461 480 aa11.51□□□□□ -0.57
PRKDC-203ENST00000432581 ZNF833PQ6ZTB9 187 aa11.51□□□□□ -0.57
PRKDC-203ENST00000432581 C10orf67Q8IYJ2 551 aa11.51□□□□□ -0.57
PRKDC-203ENST00000432581 OR52L2PQ8NGH6 319 aa11.51□□□□□ -0.57
PRKDC-203ENST00000432581 YPEL2Q96QA6 119 aa11.51□□□□□ -0.57
PRKDC-203ENST00000432581 CITED4Q96RK1 184 aa11.51□□□□□ -0.57
PRKDC-203ENST00000432581 ALX4Q9H161 411 aaPredicted RBP11.51□□□□□ -0.57
PRKDC-203ENST00000432581 FOXA2Q9Y261 457 aaPredicted RBP11.51□□□□□ -0.57
PRKDC-203ENST00000432581 EXOSC1Q9Y3B2 195 aaKnown RBP11.51□□□□□ -0.57
PRKDC-203ENST00000432581 LRRC42Q9Y546 428 aa11.51□□□□□ -0.57
PRKDC-203ENST00000432581 A0A1W2PN81 502 aa11.5□□□□□ -0.57
PRKDC-203ENST00000432581 UBE2QL1A1L167 161 aa11.5□□□□□ -0.57
PRKDC-203ENST00000432581 WBP4O75554 376 aaKnown RBP11.5□□□□□ -0.57
PRKDC-203ENST00000432581 CRTAPO75718 401 aaPredicted RBP11.5□□□□□ -0.57
PRKDC-203ENST00000432581 MAS1P04201 325 aa11.5□□□□□ -0.57
PRKDC-203ENST00000432581 CHRNA7P36544 502 aa11.5□□□□□ -0.57
PRKDC-203ENST00000432581 SLURP1P55000 103 aa11.5□□□□□ -0.57
PRKDC-203ENST00000432581 MED21Q13503 144 aa11.5□□□□□ -0.57
PRKDC-203ENST00000432581 SMN1Q16637 294 aaKnown RBP11.5□□□□□ -0.57
PRKDC-203ENST00000432581 ECSCRQ19T08 205 aa11.5□□□□□ -0.57
PRKDC-203ENST00000432581 C19orf54Q5BKX5 351 aa11.5□□□□□ -0.57
PRKDC-203ENST00000432581 DMKNQ6E0U4 476 aaPredicted RBP11.5□□□□□ -0.57
PRKDC-203ENST00000432581 PYHIN1Q6K0P9 492 aa11.5□□□□□ -0.57
PRKDC-203ENST00000432581 FAM71F2Q6NXP2 309 aa11.5□□□□□ -0.57
PRKDC-203ENST00000432581 OR2AK2Q8NG84 335 aa11.5□□□□□ -0.57
PRKDC-203ENST00000432581 GALMQ96C23 342 aa11.5□□□□□ -0.57
PRKDC-203ENST00000432581 Q96M66 194 aa11.5□□□□□ -0.57
PRKDC-203ENST00000432581 SLC29A1Q99808 456 aa11.5□□□□□ -0.57
PRKDC-203ENST00000432581 BANF2Q9H503 90 aa11.5□□□□□ -0.57
PRKDC-203ENST00000432581 DIMT1Q9UNQ2 313 aaKnown RBP11.5□□□□□ -0.57
PRKDC-203ENST00000432581 SAA2-SAA4A0A096LPE2 208 aa11.49□□□□□ -0.57
PRKDC-203ENST00000432581 TRBV5-7A0A0A0MS05 114 aa11.49□□□□□ -0.57
PRKDC-203ENST00000432581 ARPC1BO15143 372 aaKnown RBP11.49□□□□□ -0.57
PRKDC-203ENST00000432581 PDCD6O75340 191 aa11.49□□□□□ -0.57
PRKDC-203ENST00000432581 LALBAP00709 142 aa11.49□□□□□ -0.57
PRKDC-203ENST00000432581 SAA2P0DJI9 122 aaPredicted RBP11.49□□□□□ -0.57
PRKDC-203ENST00000432581 OR3A3P47888 321 aa11.49□□□□□ -0.57
PRKDC-203ENST00000432581 RPS11P62280 158 aaKnown RBP eCLIP11.49□□□□□ -0.57
PRKDC-203ENST00000432581 NDPQ00604 133 aa11.49□□□□□ -0.57
PRKDC-203ENST00000432581 TMEM267Q0VDI3 215 aaPredicted RBP11.49□□□□□ -0.57
PRKDC-203ENST00000432581 DOC2BQ14184 412 aa11.49□□□□□ -0.57
PRKDC-203ENST00000432581 SIGIRRQ6IA17 410 aa11.49□□□□□ -0.57
PRKDC-203ENST00000432581 ZNF555Q8NEP9 628 aa11.49□□□□□ -0.57
PRKDC-203ENST00000432581 MRPL30Q8TCC3 161 aaKnown RBP11.49□□□□□ -0.57
PRKDC-203ENST00000432581 ARPC1AQ92747 370 aa11.49□□□□□ -0.57
PRKDC-203ENST00000432581 FLYWCH2Q96CP2 140 aaKnown RBP11.49□□□□□ -0.57
PRKDC-203ENST00000432581 PGLYRP3Q96LB9 341 aa11.49□□□□□ -0.57
PRKDC-203ENST00000432581 OR4C12Q96R67 309 aa11.49□□□□□ -0.57
PRKDC-203ENST00000432581 TPSG1Q9NRR2 321 aa11.49□□□□□ -0.57
PRKDC-203ENST00000432581 FAM53CQ9NYF3 392 aa11.49□□□□□ -0.57
PRKDC-203ENST00000432581 RNF150Q9ULK6 438 aa11.49□□□□□ -0.57
PRKDC-203ENST00000432581 IGHV4OR15-8A0A075B7B6 117 aa11.48□□□□□ -0.57
PRKDC-203ENST00000432581 A0A087WW49 117 aa11.48□□□□□ -0.57
PRKDC-203ENST00000432581 LCE6AA0A183 80 aa11.48□□□□□ -0.57
PRKDC-203ENST00000432581 TRIM64CA6NLI5 447 aa11.48□□□□□ -0.57
PRKDC-203ENST00000432581 RRHO14718 337 aa11.48□□□□□ -0.57
PRKDC-203ENST00000432581 SOX15O60248 233 aa11.48□□□□□ -0.57
PRKDC-203ENST00000432581 HSPB1P04792 205 aaKnown RBP11.48□□□□□ -0.57
PRKDC-203ENST00000432581 CAPGP40121 348 aa11.48□□□□□ -0.57
PRKDC-203ENST00000432581 CX3CL1P78423 397 aa11.48□□□□□ -0.57
PRKDC-203ENST00000432581 PITPNAQ00169 270 aa11.48□□□□□ -0.57
PRKDC-203ENST00000432581 PLGLAQ15195 96 aa11.48□□□□□ -0.57
PRKDC-203ENST00000432581 OR14A2Q96R54 314 aa11.48□□□□□ -0.57
PRKDC-203ENST00000432581 TM2D3Q9BRN9 247 aa11.48□□□□□ -0.57
PRKDC-203ENST00000432581 UQCC2Q9BRT2 126 aa11.48□□□□□ -0.57
PRKDC-203ENST00000432581 PIPOXQ9P0Z9 390 aa11.48□□□□□ -0.57
PRKDC-203ENST00000432581 ABRACLQ9P1F3 81 aa11.48□□□□□ -0.57
PRKDC-203ENST00000432581 GHRLQ9UBU3 117 aa11.48□□□□□ -0.57
PRKDC-203ENST00000432581 FBXO7Q9Y3I1 522 aa11.48□□□□□ -0.57
PRKDC-203ENST00000432581 A0A1W2PPK0 400 aa11.47□□□□□ -0.57
PRKDC-203ENST00000432581 OR5H14A6NHG9 310 aa11.47□□□□□ -0.57
PRKDC-203ENST00000432581 LDLRAD4O15165 306 aa11.47□□□□□ -0.57
PRKDC-203ENST00000432581 CD40LGP29965 261 aa11.47□□□□□ -0.57
PRKDC-203ENST00000432581 TAS2R43P59537 309 aa11.47□□□□□ -0.57
PRKDC-203ENST00000432581 C6orf141Q5SZD1 244 aa11.47□□□□□ -0.57
PRKDC-203ENST00000432581 CD200R1LQ6Q8B3 271 aa11.47□□□□□ -0.57
PRKDC-203ENST00000432581 FAM131AQ6UXB0 335 aa11.47□□□□□ -0.57
PRKDC-203ENST00000432581 LYPD6Q86Y78 171 aa11.47□□□□□ -0.57
PRKDC-203ENST00000432581 NKAIN3Q8N8D7 197 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms