RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 TMEM133Q9H2Q1 129 aa13.96□□□□□ -0.17
LINC00887-203ENST00000429578 UNKLQ9H9P5 680 aaKnown RBP13.96□□□□□ -0.17
LINC00887-203ENST00000429578 SETD2Q9BYW2 2564 aaPredicted RBP13.96□□□□□ -0.17
LINC00887-203ENST00000429578 ACANP16112 2415 aa13.96□□□□□ -0.17
LINC00887-203ENST00000429578 AADACP22760 399 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 GATA3P23771 443 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 PRTN3P24158 256 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 CCR6P51684 374 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 RGS21Q2M5E4 152 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 Q3ZCU0 254 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 UTF1Q5T230 341 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 DCAF12L2Q5VW00 463 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 Q71RC1 249 aaPredicted RBP13.95□□□□□ -0.18
LINC00887-203ENST00000429578 EDARADDQ8WWZ3 215 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 MOB3AQ96BX8 217 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 PARP12Q9H0J9 701 aaKnown RBP13.95□□□□□ -0.18
LINC00887-203ENST00000429578 HIF1ANQ9NWT6 349 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 NF1P21359 2839 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 FAM240BA0A1B0GVZ2 78 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 FAM172BPA6NC97 362 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 OR5H14A6NHG9 310 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 TOX4O94842 621 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 PTTG1O95997 202 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 MMP9P14780 707 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 CD34P28906 385 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 CLEC9AQ6UXN8 241 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 NRARPQ7Z6K4 114 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 GLCCI1Q86VQ1 547 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 OR13C8Q8NGS7 320 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 LEAP2Q969E1 77 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 MRGPRFQ96AM1 343 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 SUCNR1Q9BXA5 334 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 DPAGT1Q9H3H5 408 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 SIRT7Q9NRC8 400 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 PSG11Q9UQ72 335 aa13.95□□□□□ -0.18
LINC00887-203ENST00000429578 ITGB1BP1O14713 200 aa13.94□□□□□ -0.18
LINC00887-203ENST00000429578 TGFAP01135 160 aa13.94□□□□□ -0.18
LINC00887-203ENST00000429578 IGHV3-7P01780 117 aa13.94□□□□□ -0.18
LINC00887-203ENST00000429578 HOXB4P17483 251 aaPredicted RBP13.94□□□□□ -0.18
LINC00887-203ENST00000429578 ZNF134P52741 427 aa13.94□□□□□ -0.18
LINC00887-203ENST00000429578 HERV-K104P61576 105 aa13.94□□□□□ -0.18
LINC00887-203ENST00000429578 RBMS2Q15434 407 aaKnown RBP13.94□□□□□ -0.18
LINC00887-203ENST00000429578 KRTAP21-3Q3LHN1 58 aa13.94□□□□□ -0.18
LINC00887-203ENST00000429578 PLA1AQ53H76 456 aa13.94□□□□□ -0.18
LINC00887-203ENST00000429578 VMO1Q7Z5L0 202 aa13.94□□□□□ -0.18
LINC00887-203ENST00000429578 ZNF439Q8NDP4 499 aa13.94□□□□□ -0.18
LINC00887-203ENST00000429578 OR2AK2Q8NG84 335 aa13.94□□□□□ -0.18
LINC00887-203ENST00000429578 ENKURQ8TC29 256 aa13.94□□□□□ -0.18
LINC00887-203ENST00000429578 FAM216AQ8WUB2 273 aa13.94□□□□□ -0.18
LINC00887-203ENST00000429578 SLC25A21Q9BQT8 299 aaPredicted RBP13.94□□□□□ -0.18
LINC00887-203ENST00000429578 COPZ2Q9P299 210 aa13.94□□□□□ -0.18
LINC00887-203ENST00000429578 ECI1P42126 302 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 LUMP51884 338 aaPredicted RBP13.93□□□□□ -0.18
LINC00887-203ENST00000429578 DLX1P56177 255 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 FXYD4P59646 89 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 CYB5R2Q6BCY4 276 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 ABHD12Q8N2K0 398 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 C8orf31Q8N9H6 132 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 DUSP18Q8NEJ0 188 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 TNFRSF14Q92956 283 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 AGMATQ9BSE5 352 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 PCGF1Q9BSM1 259 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 IGHV2-26A0A0B4J1V2 119 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 IGKV1D-13A0A0B4J2D9 117 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 SMAD7O15105 426 aaKnown RBP13.93□□□□□ -0.18
LINC00887-203ENST00000429578 NDUFB6O95139 128 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 OR8U9P0C7N5 309 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 IGKV1-13P0DP09 117 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 UCP3P55916 312 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 CT45A1Q5HYN5 189 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 SLC25A48Q6ZT89 311 aaKnown RBP13.93□□□□□ -0.18
LINC00887-203ENST00000429578 LDLRAD3Q86YD5 345 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 OR13D1Q8NGV5 346 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 OR8U1Q8NH10 309 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 OR9G1Q8NH87 305 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 CT45A3Q8NHU0 189 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 TBX15Q96SF7 602 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 ABHD14AQ9BUJ0 271 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 CLEC7AQ9BXN2 247 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 FXYD6Q9H0Q3 95 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 OCEL1Q9H607 264 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 HEXA-AS1Q9H8Q6 139 aa13.93□□□□□ -0.18
LINC00887-203ENST00000429578 RBM7Q9Y580 266 aaKnown RBP13.93□□□□□ -0.18
LINC00887-203ENST00000429578 TCRBP04435 133 aa13.92□□□□□ -0.18
LINC00887-203ENST00000429578 GNG10P50151 68 aa13.92□□□□□ -0.18
LINC00887-203ENST00000429578 RAB7AP51149 207 aa13.92□□□□□ -0.18
LINC00887-203ENST00000429578 SURF2Q15527 256 aaPredicted RBP13.92□□□□□ -0.18
LINC00887-203ENST00000429578 NCR3LG1Q68D85 454 aa13.92□□□□□ -0.18
LINC00887-203ENST00000429578 LINC00311Q8N616 119 aa13.92□□□□□ -0.18
LINC00887-203ENST00000429578 ZNF596Q8TC21 504 aa13.92□□□□□ -0.18
LINC00887-203ENST00000429578 MARCH1Q8TCQ1 289 aa13.92□□□□□ -0.18
LINC00887-203ENST00000429578 TOMM40LQ969M1 308 aa13.92□□□□□ -0.18
LINC00887-203ENST00000429578 C7orf69Q9H7B7 122 aa13.92□□□□□ -0.18
LINC00887-203ENST00000429578 AUP1Q9Y679 476 aa13.92□□□□□ -0.18
LINC00887-203ENST00000429578 A0A1W2PPE3 182 aa13.91□□□□□ -0.18
LINC00887-203ENST00000429578 J3QLI3 93 aa13.91□□□□□ -0.18
LINC00887-203ENST00000429578 J3QR06 171 aa13.91□□□□□ -0.18
LINC00887-203ENST00000429578 SLC31A2O15432 143 aa13.91□□□□□ -0.18
LINC00887-203ENST00000429578 ST8SIA5O15466 376 aa13.91□□□□□ -0.18
LINC00887-203ENST00000429578 PRB3Q04118 309 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms