RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 POLR2LP62875 67 aaKnown RBP7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 SEC11AP67812 179 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 CCL7P80098 99 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 ITPRIPL2Q3MIP1 535 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 TMEM177Q53S58 311 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 WDR74Q6RFH5 385 aaPredicted RBP7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 ABHD17AQ96GS6 310 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 LINC00615Q96LM1 132 aaPredicted RBP7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 DUSP23Q9BVJ7 150 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 CLEC7AQ9BXN2 247 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 PECRQ9BY49 303 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 MMP25Q9NPA2 562 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 THYN1Q9P016 225 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 KLHL13Q9P2N7 655 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 B9D1Q9UPM9 204 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 DNAH14Q0VDD8 3507 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 FAM231BA6NCW3 169 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 J3QR89 54 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 CST7O76096 145 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 GPR75O95800 540 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 RENP00797 406 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 CBLN1P23435 193 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 REG1BP48304 166 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 SP6Q3SY56 376 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 POM121L1PQ3SYA9 428 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 RD3Q7Z3Z2 195 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 HAPLN4Q86UW8 402 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 MRPL43Q8N983 215 aaKnown RBP7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 LRRC75AQ8NAA5 344 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 VN1R2Q8NFZ6 395 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 NEIL1Q96FI4 390 aaPredicted RBP7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 ARHGAP5-AS1Q96IT6 56 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 APOOQ9BUR5 198 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 WDR61Q9GZS3 305 aaKnown RBP7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 JKAMPQ9P055 326 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 C9orf118A6NHY6 69 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 ERI3O43414 337 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 SRSF10O75494 262 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 BGLAPP02818 100 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 MT-ND6P03923 174 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 CISD3P0C7P0 127 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 RPS27P42677 84 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 TBR1Q16650 682 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 INO80CQ6PI98 192 aaPredicted RBP7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 SLC25A34Q6PIV7 304 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 CBLN3Q6UW01 205 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 FOXI2Q6ZQN5 318 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 SCCPDHQ8NBX0 429 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 LHX4Q969G2 390 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 GNB1LQ9BYB4 327 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 COMMD5Q9GZQ3 224 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 MRPL16Q9NX20 251 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 TAAR3PQ9P1P4 343 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 DAPP1Q9UN19 280 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 PTRH2Q9Y3E5 179 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 HS3ST3A1Q9Y663 406 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 R4GMQ9 66 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 C2orf72A6NCS6 295 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 K7ESM1 405 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 F2RL2O00254 374 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 ZNF207O43670 478 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 MPIG6BO95866 241 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 CELA3BP08861 270 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 ZNF17P17021 662 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 HIST1H1TP22492 207 aaPredicted RBP7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 RELBQ01201 579 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 ABCA11PQ4W5N1 156 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 PLPP4Q5VZY2 271 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 ZNF788Q6ZQV5 615 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 ATOH7Q8N100 152 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 OR4A5Q8NH83 315 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 SCGB1C1Q8TD33 95 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 ZNF721Q8TF20 911 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 C1orf147Q96MC9 270 aaPredicted RBP7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 AP1S3Q96PC3 154 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 SFXN3Q9BWM7 321 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 TMEM59Q9BXS4 323 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 ULBP2Q9BZM5 246 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 PLA2G3Q9NZ20 509 aa7.58□□□□□ -1.2
CDC42BPA-206ENST00000429440 TMEM265A0A087WTH1 108 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 FCN1O00602 326 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 PLPP3O14495 311 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 BRI3O95415 125 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 PMCHP20382 165 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 CTXN1P60606 82 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 HIST1H1AQ02539 215 aaPredicted RBP7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 COX19Q49B96 90 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 ZNF324BQ6AW86 544 aaPredicted RBP7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 Q6ZSR6 202 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 OR2K2Q8NGT1 345 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 OR4F5Q8NH21 305 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 DAZLQ92904 295 aaKnown RBP7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 C8orf44Q96CB5 159 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 MBD6Q96DN6 1003 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 SLC39A9Q9NUM3 307 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 THAP10Q9P2Z0 257 aaPredicted RBP7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 SLC17A4Q9Y2C5 497 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 SPTBN5Q9NRC6 3674 aaKnown RBP7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 ANKRD30BLA7E2S9 258 aa7.57□□□□□ -1.2
CDC42BPA-206ENST00000429440 H3BRM9 83 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms